RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 TRIM44Q96DX7 344 aaPredicted RBP13.23□□□□□ -0.29
RTFDC1-204ENST00000449062 F2RL3Q96RI0 385 aa13.23□□□□□ -0.29
RTFDC1-204ENST00000449062 NPLQ9BXD5 320 aaPredicted RBP13.23□□□□□ -0.29
RTFDC1-204ENST00000449062 PRDM7Q9NQW5 492 aa13.23□□□□□ -0.29
RTFDC1-204ENST00000449062 NTNG1Q9Y2I2 539 aa13.23□□□□□ -0.29
RTFDC1-204ENST00000449062 MAST4O15021 2626 aa13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 A0A087WUV0 522 aaPredicted RBP13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 ANKDD1BA6NHY2 528 aa13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 SYCE1LA8MT33 242 aa13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 SUPT3HB4E1H0 165 aa13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 B4GALT2O60909 372 aa13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 SUPT3HO75486 399 aa13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 CDC123O75794 336 aaPredicted RBP13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 S100BP04271 92 aaPredicted RBP13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 INHBAP08476 426 aa13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 RHOXF2BP0C7M4 288 aa13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 COL6A2P12110 1019 aa13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 RNH1P13489 461 aaKnown RBP13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 MSH2P43246 934 aa13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 ALDH18A1P54886 795 aaKnown RBP13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 SKP1P63208 163 aa13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 PFKFB4Q16877 469 aa13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 SFT2D3Q587I9 215 aa13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 TECRLQ5HYJ1 363 aa13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 IRAK1BP1Q5VVH5 260 aa13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 B3GNTL1Q67FW5 361 aaPredicted RBP13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 METTL2BQ6P1Q9 378 aaKnown RBP13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 ADGRD1Q6QNK2 874 aa13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 TIFABQ6ZNK6 161 aa13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 QSOX2Q6ZRP7 698 aa13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 CISD2Q8N5K1 135 aaKnown RBP13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 SIRT6Q8N6T7 355 aa13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 NFAM1Q8NET5 270 aaPredicted RBP13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 OR2L5Q8NG80 312 aa13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 OR7G3Q8NG95 312 aa13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 M1APQ8TC57 530 aa13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 NPAS2Q99743 824 aa13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 RHOXF2Q9BQY4 288 aa13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 RBCK1Q9BYM8 510 aa13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 VPS11Q9H270 941 aa13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 ASF1BQ9NVP2 202 aa13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 PLA2G3Q9NZ20 509 aa13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 KCMF1Q9P0J7 381 aa13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 PTGFRNQ9P2B2 879 aa13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 OPTCQ9UBM4 332 aa13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 C19orf25Q9UFG5 118 aaPredicted RBP13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 TSC22D4Q9Y3Q8 395 aa13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 UTP20O75691 2785 aaKnown RBP13.22□□□□□ -0.29
RTFDC1-204ENST00000449062 NAV2Q8IVL1 2488 aa13.21□□□□□ -0.29
RTFDC1-204ENST00000449062 A0A0G2JN53 185 aa13.21□□□□□ -0.29
RTFDC1-204ENST00000449062 TCRBV16S1A1N1A0A5B0 115 aa13.21□□□□□ -0.29
RTFDC1-204ENST00000449062 TCP11X1B4DZS4 312 aa13.21□□□□□ -0.29
RTFDC1-204ENST00000449062 TRIM49D1C9J1S8 452 aa13.21□□□□□ -0.29
RTFDC1-204ENST00000449062 POC1B-GALNT4F8VUJ3 575 aa13.21□□□□□ -0.29
RTFDC1-204ENST00000449062 CYR61O00622 381 aa13.21□□□□□ -0.29
RTFDC1-204ENST00000449062 RIPK2O43353 540 aa13.21□□□□□ -0.29
RTFDC1-204ENST00000449062 ERI3O43414 337 aaKnown RBP13.21□□□□□ -0.29
RTFDC1-204ENST00000449062 PRMT3O60678 531 aa13.21□□□□□ -0.29
RTFDC1-204ENST00000449062 KRT38O76015 456 aa13.21□□□□□ -0.29
RTFDC1-204ENST00000449062 EPB42P16452 691 aa13.21□□□□□ -0.29
RTFDC1-204ENST00000449062 JAK1P23458 1154 aa13.21□□□□□ -0.29
RTFDC1-204ENST00000449062 CNTFP26441 200 aa13.21□□□□□ -0.29
RTFDC1-204ENST00000449062 TSFMP43897 325 aaKnown RBP13.21□□□□□ -0.29
RTFDC1-204ENST00000449062 PAGE2BQ5JRK9 111 aa13.21□□□□□ -0.29
RTFDC1-204ENST00000449062 MFSD4BQ5TF39 518 aa13.21□□□□□ -0.29
RTFDC1-204ENST00000449062 SCUBE1Q8IWY4 988 aa13.21□□□□□ -0.29
RTFDC1-204ENST00000449062 IQCKQ8N0W5 287 aa13.21□□□□□ -0.29
RTFDC1-204ENST00000449062 TEX9Q8N6V9 391 aa13.21□□□□□ -0.29
RTFDC1-204ENST00000449062 EIF1ADQ8N9N8 165 aaKnown RBP13.21□□□□□ -0.29
RTFDC1-204ENST00000449062 TMEM52Q8NDY8 209 aa13.21□□□□□ -0.29
RTFDC1-204ENST00000449062 PTCHD1Q96NR3 888 aa13.21□□□□□ -0.29
RTFDC1-204ENST00000449062 MS4A8Q9BY19 250 aa13.21□□□□□ -0.29
RTFDC1-204ENST00000449062 REXO4Q9GZR2 422 aaKnown RBP13.21□□□□□ -0.29
RTFDC1-204ENST00000449062 RNF32Q9H0A6 362 aa13.21□□□□□ -0.29
RTFDC1-204ENST00000449062 MMP25Q9NPA2 562 aa13.21□□□□□ -0.29
RTFDC1-204ENST00000449062 NECTIN3Q9NQS3 549 aa13.21□□□□□ -0.29
RTFDC1-204ENST00000449062 TGFBR3LH3BV60 316 aa13.2□□□□□ -0.3
RTFDC1-204ENST00000449062 E2F3O00716 465 aa13.2□□□□□ -0.3
RTFDC1-204ENST00000449062 SCELO95171 688 aa13.2□□□□□ -0.3
RTFDC1-204ENST00000449062 SIX3O95343 332 aaPredicted RBP13.2□□□□□ -0.3
RTFDC1-204ENST00000449062 CBX6O95503 412 aa13.2□□□□□ -0.3
RTFDC1-204ENST00000449062 WDPCPO95876 746 aa13.2□□□□□ -0.3
RTFDC1-204ENST00000449062 SNRPAP09012 282 aaKnown RBP13.2□□□□□ -0.3
RTFDC1-204ENST00000449062 RBP1P09455 135 aa13.2□□□□□ -0.3
RTFDC1-204ENST00000449062 MYBL2P10244 700 aa13.2□□□□□ -0.3
RTFDC1-204ENST00000449062 MAOAP21397 527 aa13.2□□□□□ -0.3
RTFDC1-204ENST00000449062 UQCRFS1P47985 274 aa13.2□□□□□ -0.3
RTFDC1-204ENST00000449062 TNFSF10P50591 281 aa13.2□□□□□ -0.3
RTFDC1-204ENST00000449062 HNRNPFP52597 415 aaKnown RBP13.2□□□□□ -0.3
RTFDC1-204ENST00000449062 PLA2G16P53816 162 aa13.2□□□□□ -0.3
RTFDC1-204ENST00000449062 OR4D2P58180 307 aa13.2□□□□□ -0.3
RTFDC1-204ENST00000449062 SLC29A2Q14542 456 aa13.2□□□□□ -0.3
RTFDC1-204ENST00000449062 TLR1Q15399 786 aa13.2□□□□□ -0.3
RTFDC1-204ENST00000449062 HIST2H2ACQ16777 129 aaPredicted RBP13.2□□□□□ -0.3
RTFDC1-204ENST00000449062 DEPDC1Q5TB30 811 aa13.2□□□□□ -0.3
RTFDC1-204ENST00000449062 HIST2H2AA3Q6FI13 130 aa13.2□□□□□ -0.3
RTFDC1-204ENST00000449062 GRHL2Q6ISB3 625 aa13.2□□□□□ -0.3
RTFDC1-204ENST00000449062 RPUSD3Q6P087 351 aaKnown RBP13.2□□□□□ -0.3
RTFDC1-204ENST00000449062 PAPD4Q6PIY7 484 aaKnown RBP13.2□□□□□ -0.3
RTFDC1-204ENST00000449062 ZNF793Q6ZN11 406 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms