RNA–Protein interactions for RNA: ENST00000448276.6

SMARCD2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-203ENST00000448276 MED30Q96HR3 178 aa19.63■□□□□ 0.73
SMARCD2-203ENST00000448276 RIPOR3Q96MK2 946 aa19.63■□□□□ 0.73
SMARCD2-203ENST00000448276 UROC1Q96N76 676 aa19.63■□□□□ 0.73
SMARCD2-203ENST00000448276 ACER3Q9NUN7 267 aa19.63■□□□□ 0.73
SMARCD2-203ENST00000448276 FAM120CQ9NX05 1096 aaKnown RBP19.63■□□□□ 0.73
SMARCD2-203ENST00000448276 PRAMEF33A0A0G2JMD5 474 aa19.63■□□□□ 0.73
SMARCD2-203ENST00000448276 FABP12A6NFH5 140 aa19.63■□□□□ 0.73
SMARCD2-203ENST00000448276 PLA2G10O15496 165 aa19.63■□□□□ 0.73
SMARCD2-203ENST00000448276 PRAMEF10O60809 474 aa19.63■□□□□ 0.73
SMARCD2-203ENST00000448276 AP2A2O94973 939 aa19.63■□□□□ 0.73
SMARCD2-203ENST00000448276 WEE1P30291 646 aa19.63■□□□□ 0.73
SMARCD2-203ENST00000448276 IFNA8P32881 189 aa19.63■□□□□ 0.73
SMARCD2-203ENST00000448276 GPC1P35052 558 aa19.63■□□□□ 0.73
SMARCD2-203ENST00000448276 HNF1BP35680 557 aa19.63■□□□□ 0.73
SMARCD2-203ENST00000448276 RPS5P46782 204 aaKnown RBP19.63■□□□□ 0.73
SMARCD2-203ENST00000448276 CAV3P56539 151 aa19.63■□□□□ 0.73
SMARCD2-203ENST00000448276 HNRNPA0Q13151 305 aaKnown RBP19.63■□□□□ 0.73
SMARCD2-203ENST00000448276 PYDC2Q56P42 97 aa19.63■□□□□ 0.73
SMARCD2-203ENST00000448276 WDR45BQ5MNZ6 344 aa19.63■□□□□ 0.73
SMARCD2-203ENST00000448276 KRT73Q86Y46 540 aa19.63■□□□□ 0.73
SMARCD2-203ENST00000448276 FAM9CQ8IZT9 166 aa19.63■□□□□ 0.73
SMARCD2-203ENST00000448276 OR8J2Q8NGG1 315 aa19.63■□□□□ 0.73
SMARCD2-203ENST00000448276 OR5AK3PQ8NH89 298 aa19.63■□□□□ 0.73
SMARCD2-203ENST00000448276 RASSF5Q8WWW0 418 aa19.63■□□□□ 0.73
SMARCD2-203ENST00000448276 RNF121Q9H920 327 aa19.63■□□□□ 0.73
SMARCD2-203ENST00000448276 YARS2Q9Y2Z4 477 aaKnown RBP19.63■□□□□ 0.73
SMARCD2-203ENST00000448276 DPM1O60762 260 aa19.62■□□□□ 0.73
SMARCD2-203ENST00000448276 HBQ1P09105 142 aa19.62■□□□□ 0.73
SMARCD2-203ENST00000448276 CORO1AP31146 461 aaKnown RBP19.62■□□□□ 0.73
SMARCD2-203ENST00000448276 PCGF2P35227 344 aa19.62■□□□□ 0.73
SMARCD2-203ENST00000448276 UAP1L1Q3KQV9 507 aa19.62■□□□□ 0.73
SMARCD2-203ENST00000448276 GLYR1Q49A26 553 aaPredicted RBP19.62■□□□□ 0.73
SMARCD2-203ENST00000448276 CPTPQ5TA50 214 aa19.62■□□□□ 0.73
SMARCD2-203ENST00000448276 SAXO2Q658L1 398 aa19.62■□□□□ 0.73
SMARCD2-203ENST00000448276 MSANTD1Q6ZTZ1 278 aa19.62■□□□□ 0.73
SMARCD2-203ENST00000448276 VWA5B2Q8N398 1253 aa19.62■□□□□ 0.73
SMARCD2-203ENST00000448276 OR4M1Q8NGD0 313 aa19.62■□□□□ 0.73
SMARCD2-203ENST00000448276 TRIM63Q969Q1 353 aa19.62■□□□□ 0.73
SMARCD2-203ENST00000448276 LOC105371267A0A1B0GV96 52 aa19.62■□□□□ 0.73
SMARCD2-203ENST00000448276 FAPQ12884 760 aa19.62■□□□□ 0.73
SMARCD2-203ENST00000448276 BOP1Q14137 746 aaKnown RBP19.62■□□□□ 0.73
SMARCD2-203ENST00000448276 PDZK1Q5T2W1 519 aa19.62■□□□□ 0.73
SMARCD2-203ENST00000448276 MACC1Q6ZN28 852 aa19.62■□□□□ 0.73
SMARCD2-203ENST00000448276 CCDC149Q6ZUS6 474 aa19.62■□□□□ 0.73
SMARCD2-203ENST00000448276 RDH10Q8IZV5 341 aa19.62■□□□□ 0.73
SMARCD2-203ENST00000448276 REPS1Q96D71 796 aa19.62■□□□□ 0.73
SMARCD2-203ENST00000448276 VPS29Q9UBQ0 182 aa19.62■□□□□ 0.73
SMARCD2-203ENST00000448276 CLCA3PQ9Y6N3 262 aa19.62■□□□□ 0.73
SMARCD2-203ENST00000448276 SMAD6O43541 496 aaKnown RBP19.61■□□□□ 0.73
SMARCD2-203ENST00000448276 PRPH2P23942 346 aa19.61■□□□□ 0.73
SMARCD2-203ENST00000448276 ATP5C1P36542 298 aaKnown RBP19.61■□□□□ 0.73
SMARCD2-203ENST00000448276 OR3A3P47888 321 aa19.61■□□□□ 0.73
SMARCD2-203ENST00000448276 ASAH1Q13510 395 aa19.61■□□□□ 0.73
SMARCD2-203ENST00000448276 SPHARQ15513 63 aa19.61■□□□□ 0.73
SMARCD2-203ENST00000448276 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.61■□□□□ 0.73
SMARCD2-203ENST00000448276 TOR1AIP1Q5JTV8 583 aa19.61■□□□□ 0.73
SMARCD2-203ENST00000448276 SLC35F1Q5T1Q4 408 aa19.61■□□□□ 0.73
SMARCD2-203ENST00000448276 C22orf42Q6IC83 251 aa19.61■□□□□ 0.73
SMARCD2-203ENST00000448276 C1orf52Q8N6N3 182 aaKnown RBP19.61■□□□□ 0.73
SMARCD2-203ENST00000448276 L3MBTL4Q8NA19 623 aa19.61■□□□□ 0.73
SMARCD2-203ENST00000448276 GPR26Q8NDV2 337 aa19.61■□□□□ 0.73
SMARCD2-203ENST00000448276 OR9Q1Q8NGQ5 310 aa19.61■□□□□ 0.73
SMARCD2-203ENST00000448276 DEDD2Q8WXF8 326 aa19.61■□□□□ 0.73
SMARCD2-203ENST00000448276 ZIC5Q96T25 663 aa19.61■□□□□ 0.73
SMARCD2-203ENST00000448276 POLR2J2Q9GZM3 115 aaKnown RBP19.61■□□□□ 0.73
SMARCD2-203ENST00000448276 FTSJ1Q9UET6 329 aa19.61■□□□□ 0.73
SMARCD2-203ENST00000448276 LSM2Q9Y333 95 aaKnown RBP19.61■□□□□ 0.73
SMARCD2-203ENST00000448276 SCAMP2O15127 329 aaKnown RBP19.61■□□□□ 0.73
SMARCD2-203ENST00000448276 ARHGEF15O94989 841 aa19.61■□□□□ 0.73
SMARCD2-203ENST00000448276 IGHA2P01877 340 aa19.61■□□□□ 0.73
SMARCD2-203ENST00000448276 TSPAN19P0C672 248 aa19.61■□□□□ 0.73
SMARCD2-203ENST00000448276 PSMA1P25786 263 aaKnown RBP19.61■□□□□ 0.73
SMARCD2-203ENST00000448276 ACSM2AQ08AH3 577 aa19.61■□□□□ 0.73
SMARCD2-203ENST00000448276 ZNF385BQ569K4 471 aa19.61■□□□□ 0.73
SMARCD2-203ENST00000448276 ACSM2BQ68CK6 577 aa19.61■□□□□ 0.73
SMARCD2-203ENST00000448276 PRR23CQ6ZRP0 262 aa19.61■□□□□ 0.73
SMARCD2-203ENST00000448276 NPAS3Q8IXF0 933 aa19.61■□□□□ 0.73
SMARCD2-203ENST00000448276 CELF5Q8N6W0 485 aaKnown RBP19.61■□□□□ 0.73
SMARCD2-203ENST00000448276 FOXJ1Q92949 421 aa19.61■□□□□ 0.73
SMARCD2-203ENST00000448276 MAP4K5Q9Y4K4 846 aa19.61■□□□□ 0.73
SMARCD2-203ENST00000448276 SNX11Q9Y5W9 270 aa19.61■□□□□ 0.73
SMARCD2-203ENST00000448276 MTMR11A4FU01 709 aa19.6■□□□□ 0.73
SMARCD2-203ENST00000448276 C2orf78A6NCI8 922 aa19.6■□□□□ 0.73
SMARCD2-203ENST00000448276 ZNF670-ZNF695F2Z2N8 137 aa19.6■□□□□ 0.73
SMARCD2-203ENST00000448276 GADD45GO95257 159 aa19.6■□□□□ 0.73
SMARCD2-203ENST00000448276 ENDOUP21128 410 aaKnown RBP19.6■□□□□ 0.73
SMARCD2-203ENST00000448276 CRISP1P54107 249 aa19.6■□□□□ 0.73
SMARCD2-203ENST00000448276 B4GALNT1Q00973 533 aa19.6■□□□□ 0.73
SMARCD2-203ENST00000448276 IRF8Q02556 426 aa19.6■□□□□ 0.73
SMARCD2-203ENST00000448276 NFE2L1Q14494 772 aa19.6■□□□□ 0.73
SMARCD2-203ENST00000448276 TAF1CQ15572 869 aaPredicted RBP19.6■□□□□ 0.73
SMARCD2-203ENST00000448276 BTBD16Q32M84 506 aa19.6■□□□□ 0.73
SMARCD2-203ENST00000448276 FRMPD2BQ6IN97 320 aa19.6■□□□□ 0.73
SMARCD2-203ENST00000448276 FAM180BQ6P0A1 224 aa19.6■□□□□ 0.73
SMARCD2-203ENST00000448276 LRRC70Q7Z2Q7 622 aa19.6■□□□□ 0.73
SMARCD2-203ENST00000448276 NXPE1Q8N323 547 aa19.6■□□□□ 0.73
SMARCD2-203ENST00000448276 MAP6Q96JE9 813 aa19.6■□□□□ 0.73
SMARCD2-203ENST00000448276 TTLL2Q9BWV7 592 aa19.6■□□□□ 0.73
SMARCD2-203ENST00000448276 GPR62Q9BZJ7 368 aa19.6■□□□□ 0.73
SMARCD2-203ENST00000448276 UCK2Q9BZX2 261 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms