RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 WDCPQ9H6R7 721 aa4.54□□□□□ -1.68
SDCBP-205ENST00000447267 ATP13A3Q9H7F0 1226 aa4.54□□□□□ -1.68
SDCBP-205ENST00000447267 KCNK13Q9HB14 408 aa4.54□□□□□ -1.68
SDCBP-205ENST00000447267 FAM207AQ9NSI2 230 aaPredicted RBP4.54□□□□□ -1.68
SDCBP-205ENST00000447267 PIGVQ9NUD9 493 aa4.54□□□□□ -1.68
SDCBP-205ENST00000447267 KCTD5Q9NXV2 234 aa4.54□□□□□ -1.68
SDCBP-205ENST00000447267 JKAMPQ9P055 326 aa4.54□□□□□ -1.68
SDCBP-205ENST00000447267 STOX2Q9P2F5 926 aaPredicted RBP4.54□□□□□ -1.68
SDCBP-205ENST00000447267 NKX1-2Q9UD57 310 aaPredicted RBP4.54□□□□□ -1.68
SDCBP-205ENST00000447267 NXT1Q9UKK6 140 aaKnown RBP4.54□□□□□ -1.68
SDCBP-205ENST00000447267 SRPRBQ9Y5M8 271 aaKnown RBP4.54□□□□□ -1.68
SDCBP-205ENST00000447267 NFS1Q9Y697 457 aa4.54□□□□□ -1.68
SDCBP-205ENST00000447267 DNAJC13O75165 2243 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 KIAA1109Q2LD37 5005 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 A0A1B0GX78 115 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 GAGE12BA1L429 117 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 GAGE12HA6NDE8 117 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 CCT8L1PA6NM43 557 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 B5MCH6 92 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 C3orf84H3BNL1 204 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 GOLGA8SH3BPF8 625 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 BTN3A3O00478 584 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 HS3ST1O14792 307 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 SPDEFO95238 335 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 ELANEP08246 267 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 NUDT17P0C025 328 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 VDRP11473 427 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 ICAM2P13598 275 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 TPSB2P20231 275 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 USF1P22415 310 aaPredicted RBP4.53□□□□□ -1.68
SDCBP-205ENST00000447267 CRYGSP22914 178 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 SERPINA4P29622 427 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 ADARP55265 1226 aaKnown RBP4.53□□□□□ -1.68
SDCBP-205ENST00000447267 HILS1P60008 231 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 SNRPFP62306 86 aaKnown RBP4.53□□□□□ -1.68
SDCBP-205ENST00000447267 POLR2LP62875 67 aaKnown RBP4.53□□□□□ -1.68
SDCBP-205ENST00000447267 MEF2AQ02078 507 aaPredicted RBP4.53□□□□□ -1.68
SDCBP-205ENST00000447267 PPP3CAQ08209 521 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 FAM27E3Q08E93 113 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 PRKAA1Q13131 559 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 TPSAB1Q15661 275 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 BTBD16Q32M84 506 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 INO80DQ53TQ3 878 aaPredicted RBP4.53□□□□□ -1.68
SDCBP-205ENST00000447267 CT47A1Q5JQC4 288 aaPredicted RBP4.53□□□□□ -1.68
SDCBP-205ENST00000447267 CASC10Q5T4H9 136 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 WLSQ5T9L3 541 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 ACAD10Q6JQN1 1059 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 H3F3CQ6NXT2 135 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 TLDC1Q6P9B6 456 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 ZNF704Q6ZNC4 412 aaPredicted RBP4.53□□□□□ -1.68
SDCBP-205ENST00000447267 NLRP9Q7RTR0 991 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 ZNF550Q7Z398 422 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 ZNF441Q8N8Z8 693 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 CPEB3Q8NE35 698 aaKnown RBP4.53□□□□□ -1.68
SDCBP-205ENST00000447267 FAM110DQ8TAY7 271 aaPredicted RBP4.53□□□□□ -1.68
SDCBP-205ENST00000447267 TSPEARQ8WU66 669 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 C3orf49Q96BT1 292 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 ZBTB9Q96C00 473 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 WDR24Q96S15 920 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 DCLRE1CQ96SD1 692 aaKnown RBP4.53□□□□□ -1.68
SDCBP-205ENST00000447267 MYCBPQ99417 103 aaPredicted RBP4.53□□□□□ -1.68
SDCBP-205ENST00000447267 TSPYL1Q9H0U9 437 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 CARD9Q9H257 536 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 CDCP1Q9H5V8 836 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 ASB8Q9H765 288 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 ESM1Q9NQ30 184 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 IMP3Q9NV31 184 aaKnown RBP4.53□□□□□ -1.68
SDCBP-205ENST00000447267 DMAC2Q9NW81 257 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 CGNQ9P2M7 1197 aaKnown RBP4.53□□□□□ -1.68
SDCBP-205ENST00000447267 SLC24A2Q9UI40 661 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 MAGED1Q9Y5V3 778 aaPredicted RBP4.53□□□□□ -1.68
SDCBP-205ENST00000447267 KIAA1549Q9HCM3 1950 aa4.53□□□□□ -1.68
SDCBP-205ENST00000447267 HEATR5AQ86XA9 2040 aa4.52□□□□□ -1.69
SDCBP-205ENST00000447267 CXorf49A8MYA2 514 aaPredicted RBP4.52□□□□□ -1.69
SDCBP-205ENST00000447267 KLRC4O43908 158 aa4.52□□□□□ -1.69
SDCBP-205ENST00000447267 TMCC2O75069 709 aa4.52□□□□□ -1.69
SDCBP-205ENST00000447267 MTX2O75431 263 aa4.52□□□□□ -1.69
SDCBP-205ENST00000447267 CCDC172P0C7W6 258 aa4.52□□□□□ -1.69
SDCBP-205ENST00000447267 HLA-DPA1P20036 260 aa4.52□□□□□ -1.69
SDCBP-205ENST00000447267 PTNP21246 168 aa4.52□□□□□ -1.69
SDCBP-205ENST00000447267 HALP42357 657 aa4.52□□□□□ -1.69
SDCBP-205ENST00000447267 CPA2P48052 419 aa4.52□□□□□ -1.69
SDCBP-205ENST00000447267 CHN2P52757 468 aa4.52□□□□□ -1.69
SDCBP-205ENST00000447267 ARFIP2P53365 341 aa4.52□□□□□ -1.69
SDCBP-205ENST00000447267 ITGA8P53708 1063 aa4.52□□□□□ -1.69
SDCBP-205ENST00000447267 PLGLB1Q02325 96 aa4.52□□□□□ -1.69
SDCBP-205ENST00000447267 OCA2Q04671 838 aa4.52□□□□□ -1.69
SDCBP-205ENST00000447267 GRM3Q14832 879 aa4.52□□□□□ -1.69
SDCBP-205ENST00000447267 SIX1Q15475 284 aaPredicted RBP4.52□□□□□ -1.69
SDCBP-205ENST00000447267 C15orf59Q2T9L4 293 aaPredicted RBP4.52□□□□□ -1.69
SDCBP-205ENST00000447267 MST1LQ2TV78 715 aa4.52□□□□□ -1.69
SDCBP-205ENST00000447267 RWDD4Q6NW29 188 aaKnown RBP4.52□□□□□ -1.69
SDCBP-205ENST00000447267 WASH2PQ6VEQ5 465 aa4.52□□□□□ -1.69
SDCBP-205ENST00000447267 FAM83HQ6ZRV2 1179 aaPredicted RBP4.52□□□□□ -1.69
SDCBP-205ENST00000447267 STXBP4Q6ZWJ1 553 aa4.52□□□□□ -1.69
SDCBP-205ENST00000447267 TRILQ7L0X0 811 aa4.52□□□□□ -1.69
SDCBP-205ENST00000447267 KRT77Q7Z794 578 aa4.52□□□□□ -1.69
SDCBP-205ENST00000447267 CAND1Q86VP6 1230 aaKnown RBP4.52□□□□□ -1.69
SDCBP-205ENST00000447267 ZNF547Q8IVP9 402 aa4.52□□□□□ -1.69
SDCBP-205ENST00000447267 SVOPLQ8N434 492 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms