RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 NSUN5P2Q63ZY6 315 aa2.99□□□□□ -1.93
PMS1-215ENST00000447232 FRMPD2BQ6IN97 320 aa2.99□□□□□ -1.93
PMS1-215ENST00000447232 PAPD4Q6PIY7 484 aaKnown RBP2.99□□□□□ -1.93
PMS1-215ENST00000447232 ETV3LQ6ZN32 361 aa2.99□□□□□ -1.93
PMS1-215ENST00000447232 ZNF704Q6ZNC4 412 aaPredicted RBP2.99□□□□□ -1.93
PMS1-215ENST00000447232 CFAP206Q8IYR0 622 aa2.99□□□□□ -1.93
PMS1-215ENST00000447232 CYP4Z2PQ8N1L4 340 aa2.99□□□□□ -1.93
PMS1-215ENST00000447232 KIF2BQ8N4N8 673 aa2.99□□□□□ -1.93
PMS1-215ENST00000447232 PSD4Q8NDX1 1056 aa2.99□□□□□ -1.93
PMS1-215ENST00000447232 MBD3L2Q8NHZ7 208 aaPredicted RBP2.99□□□□□ -1.93
PMS1-215ENST00000447232 HM13Q8TCT9 377 aa2.99□□□□□ -1.93
PMS1-215ENST00000447232 FAF2Q96CS3 445 aa2.99□□□□□ -1.93
PMS1-215ENST00000447232 HSPBAP1Q96EW2 488 aa2.99□□□□□ -1.93
PMS1-215ENST00000447232 RHNO1Q9BSD3 238 aa2.99□□□□□ -1.93
PMS1-215ENST00000447232 TMEM204Q9BSN7 226 aa2.99□□□□□ -1.93
PMS1-215ENST00000447232 UGT1A8Q9HAW9 530 aa2.99□□□□□ -1.93
PMS1-215ENST00000447232 MAGEE1Q9HCI5 957 aa2.99□□□□□ -1.93
PMS1-215ENST00000447232 IL26Q9NPH9 171 aa2.99□□□□□ -1.93
PMS1-215ENST00000447232 SMOXQ9NWM0 555 aa2.99□□□□□ -1.93
PMS1-215ENST00000447232 KLHL28Q9NXS3 571 aa2.99□□□□□ -1.93
PMS1-215ENST00000447232 CDC14AQ9UNH5 594 aa2.99□□□□□ -1.93
PMS1-215ENST00000447232 SHOC2Q9UQ13 582 aa2.99□□□□□ -1.93
PMS1-215ENST00000447232 MYRFQ9Y2G1 1151 aa2.99□□□□□ -1.93
PMS1-215ENST00000447232 FREM3P0C091 2139 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 NOTCH3Q9UM47 2321 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 NCKAP5O14513 1909 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 ALPK2Q86TB3 2170 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 LOC105369274A0A096LPK9 316 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 TRGV5A0A0B4J1U4 118 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 LOC102723532A0A0G2JNH3 316 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 FAM170AA1A519 330 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 FAM234BA2RU67 622 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 LRRC14BA6NHZ5 514 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 CD8B2A6NJW9 211 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 A8MXE2 369 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 ISM1B1AKI9 464 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 C22orf46C9J442 243 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 EPHB6O15197 1021 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 CCP110O43303 1012 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 FOXS1O43638 330 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 PRPSAP2O60256 369 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 KIAA0513O60268 411 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 LSM8O95777 96 aaKnown RBP2.98□□□□□ -1.93
PMS1-215ENST00000447232 SOD3P08294 240 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 DANCRP0C864 163 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 CA4P22748 312 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 CCKARP32238 428 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 CDKN1AP38936 164 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 GZMKP49863 264 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 AGTR2P50052 363 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 NOMO3P69849 1222 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 PLGLB1Q02325 96 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 NIPAL4Q0D2K0 466 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 GALNT2Q10471 571 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 GTF2IRD2BQ6EKJ0 949 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 SCYL2Q6P3W7 929 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 Q6ZPA2 131 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 GTF2IRD2Q86UP8 949 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 CAND1Q86VP6 1230 aaKnown RBP2.98□□□□□ -1.93
PMS1-215ENST00000447232 TRIM59Q8IWR1 403 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 CEP57L1Q8IYX8 460 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 OR4N4Q8N0Y3 316 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 NAT14Q8WUY8 206 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 TFGQ92734 400 aaPredicted RBP2.98□□□□□ -1.93
PMS1-215ENST00000447232 MSI2Q96DH6 328 aaKnown RBP2.98□□□□□ -1.93
PMS1-215ENST00000447232 FAM81BQ96LP2 452 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 TRIB3Q96RU7 358 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 TMPRSS5Q9H3S3 457 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 CLSTN2Q9H4D0 955 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 COG4Q9H9E3 785 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 IL1RL2Q9HB29 575 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 DRG1Q9Y295 367 aaKnown RBP2.98□□□□□ -1.93
PMS1-215ENST00000447232 ZNF711Q9Y462 761 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 PCDHA3Q9Y5H8 950 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 KLK4Q9Y5K2 254 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 COL7A1Q02388 2944 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 IFRD1O00458 451 aaPredicted RBP2.98□□□□□ -1.93
PMS1-215ENST00000447232 FCHO1O14526 889 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 ERN1O75460 977 aaKnown RBP2.98□□□□□ -1.93
PMS1-215ENST00000447232 PLAUP00749 431 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 MMP2P08253 660 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 PIRTP0C851 137 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 SLC25A16P16260 332 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 UGT1A6P19224 532 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 GPD1P21695 349 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 MMP8P22894 467 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 PDHA2P29803 388 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 HCAR3P49019 387 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 ZNF143P52747 638 aaPredicted RBP2.98□□□□□ -1.93
PMS1-215ENST00000447232 ARFIP2P53365 341 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 GSCP56915 257 aaPredicted RBP2.98□□□□□ -1.93
PMS1-215ENST00000447232 FOXF2Q12947 444 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 SLC10A1Q14973 349 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 STK38Q15208 465 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 CR1LQ2VPA4 569 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 SFT2D3Q587I9 215 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 RESP18Q5W5W9 173 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 ADAM5Q6NVV9 412 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 TRIM65Q6PJ69 517 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 WDR59Q6PJI9 974 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms