RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 ZNF678Q5SXM1 525 aa16.48■□□□□ 0.23
SMARCAL1-209ENST00000444508 TTC19Q6DKK2 380 aaPredicted RBP16.48■□□□□ 0.23
SMARCAL1-209ENST00000444508 FAAH2Q6GMR7 532 aa16.48■□□□□ 0.23
SMARCAL1-209ENST00000444508 ABHD17CQ6PCB6 329 aa16.48■□□□□ 0.23
SMARCAL1-209ENST00000444508 KIRREL2Q6UWL6 708 aa16.48■□□□□ 0.23
SMARCAL1-209ENST00000444508 ZYG11AQ6WRX3 759 aa16.48■□□□□ 0.23
SMARCAL1-209ENST00000444508 SRRM1Q8IYB3 904 aaKnown RBP16.48■□□□□ 0.23
SMARCAL1-209ENST00000444508 OR11G2Q8NGC1 345 aa16.48■□□□□ 0.23
SMARCAL1-209ENST00000444508 RDH11Q8TC12 318 aa16.48■□□□□ 0.23
SMARCAL1-209ENST00000444508 TBC1D20Q96BZ9 403 aa16.48■□□□□ 0.23
SMARCAL1-209ENST00000444508 ABHD17AQ96GS6 310 aa16.48■□□□□ 0.23
SMARCAL1-209ENST00000444508 KCNC2Q96PR1 638 aa16.48■□□□□ 0.23
SMARCAL1-209ENST00000444508 TMEM237Q96Q45 408 aa16.48■□□□□ 0.23
SMARCAL1-209ENST00000444508 MTERF1Q99551 399 aaKnown RBP16.48■□□□□ 0.23
SMARCAL1-209ENST00000444508 NPLQ9BXD5 320 aaPredicted RBP16.48■□□□□ 0.23
SMARCAL1-209ENST00000444508 RBCK1Q9BYM8 510 aa16.48■□□□□ 0.23
SMARCAL1-209ENST00000444508 VN1R1Q9GZP7 353 aa16.48■□□□□ 0.23
SMARCAL1-209ENST00000444508 ATP13A2Q9NQ11 1180 aa16.48■□□□□ 0.23
SMARCAL1-209ENST00000444508 MID2Q9UJV3 735 aa16.48■□□□□ 0.23
SMARCAL1-209ENST00000444508 ALOX12BO75342 701 aa16.47■□□□□ 0.23
SMARCAL1-209ENST00000444508 SH3BGRLO75368 114 aa16.47■□□□□ 0.23
SMARCAL1-209ENST00000444508 TGFB1P01137 390 aa16.47■□□□□ 0.23
SMARCAL1-209ENST00000444508 C8orf89P0DMQ9 161 aa16.47■□□□□ 0.23
SMARCAL1-209ENST00000444508 MTTPP55157 894 aa16.47■□□□□ 0.23
SMARCAL1-209ENST00000444508 ZNF844Q08AG5 666 aa16.47■□□□□ 0.23
SMARCAL1-209ENST00000444508 GGTA1PQ4G0N0 100 aa16.47■□□□□ 0.23
SMARCAL1-209ENST00000444508 UNC50Q53HI1 259 aa16.47■□□□□ 0.23
SMARCAL1-209ENST00000444508 KHDRBS2Q5VWX1 349 aaKnown RBP16.47■□□□□ 0.23
SMARCAL1-209ENST00000444508 RPS27LQ71UM5 84 aaKnown RBP16.47■□□□□ 0.23
SMARCAL1-209ENST00000444508 CA13Q8N1Q1 262 aa16.47■□□□□ 0.23
SMARCAL1-209ENST00000444508 OR4F6Q8NGB9 312 aa16.47■□□□□ 0.23
SMARCAL1-209ENST00000444508 TRPC4APQ8TEL6 797 aa16.47■□□□□ 0.23
SMARCAL1-209ENST00000444508 C8orf44Q96CB5 159 aa16.47■□□□□ 0.23
SMARCAL1-209ENST00000444508 L3HYPDHQ96EM0 354 aa16.47■□□□□ 0.23
SMARCAL1-209ENST00000444508 APOPT1Q96IL0 206 aa16.47■□□□□ 0.23
SMARCAL1-209ENST00000444508 SERINC2Q96SA4 455 aa16.47■□□□□ 0.23
SMARCAL1-209ENST00000444508 SMC6Q96SB8 1091 aa16.47■□□□□ 0.23
SMARCAL1-209ENST00000444508 TBCDQ9BTW9 1192 aa16.47■□□□□ 0.23
SMARCAL1-209ENST00000444508 SLC25A23Q9BV35 468 aa16.47■□□□□ 0.23
SMARCAL1-209ENST00000444508 SEMA4CQ9C0C4 833 aa16.47■□□□□ 0.23
SMARCAL1-209ENST00000444508 SLC25A18Q9H1K4 315 aa16.47■□□□□ 0.23
SMARCAL1-209ENST00000444508 DMRT3Q9NQL9 472 aa16.47■□□□□ 0.23
SMARCAL1-209ENST00000444508 MKS1Q9NXB0 559 aa16.47■□□□□ 0.23
SMARCAL1-209ENST00000444508 C19orf25Q9UFG5 118 aaPredicted RBP16.47■□□□□ 0.23
SMARCAL1-209ENST00000444508 STK38LQ9Y2H1 464 aa16.47■□□□□ 0.23
SMARCAL1-209ENST00000444508 PCSK5Q92824 1860 aa16.47■□□□□ 0.23
SMARCAL1-209ENST00000444508 SPTA1P02549 2419 aa16.46■□□□□ 0.23
SMARCAL1-209ENST00000444508 MED13Q9UHV7 2174 aa16.46■□□□□ 0.23
SMARCAL1-209ENST00000444508 A6NL46 340 aa16.46■□□□□ 0.23
SMARCAL1-209ENST00000444508 G3V2L1 256 aa16.46■□□□□ 0.23
SMARCAL1-209ENST00000444508 DNAJB6O75190 326 aa16.46■□□□□ 0.23
SMARCAL1-209ENST00000444508 CDC123O75794 336 aaPredicted RBP16.46■□□□□ 0.23
SMARCAL1-209ENST00000444508 MLYCDO95822 493 aa16.46■□□□□ 0.23
SMARCAL1-209ENST00000444508 HPP00738 406 aa16.46■□□□□ 0.23
SMARCAL1-209ENST00000444508 CPA3P15088 417 aa16.46■□□□□ 0.23
SMARCAL1-209ENST00000444508 TSPAN8P19075 237 aa16.46■□□□□ 0.23
SMARCAL1-209ENST00000444508 PTX3P26022 381 aaPredicted RBP16.46■□□□□ 0.23
SMARCAL1-209ENST00000444508 RAP1GDS1P52306 607 aa16.46■□□□□ 0.23
SMARCAL1-209ENST00000444508 NAA20P61599 178 aa16.46■□□□□ 0.23
SMARCAL1-209ENST00000444508 EEF1A2Q05639 463 aaKnown RBP16.46■□□□□ 0.23
SMARCAL1-209ENST00000444508 IFT88Q13099 833 aa16.46■□□□□ 0.23
SMARCAL1-209ENST00000444508 AIMP2Q13155 320 aaKnown RBP16.46■□□□□ 0.23
SMARCAL1-209ENST00000444508 AP5B1Q2VPB7 878 aa16.46■□□□□ 0.23
SMARCAL1-209ENST00000444508 LACTB2Q53H82 288 aaPredicted RBP16.46■□□□□ 0.23
SMARCAL1-209ENST00000444508 C10orf62Q5T681 223 aaPredicted RBP16.46■□□□□ 0.23
SMARCAL1-209ENST00000444508 DEPDC1Q5TB30 811 aa16.46■□□□□ 0.23
SMARCAL1-209ENST00000444508 FRG2Q64ET8 278 aa16.46■□□□□ 0.23
SMARCAL1-209ENST00000444508 TMEM205Q6UW68 189 aa16.46■□□□□ 0.23
SMARCAL1-209ENST00000444508 NDUFAF7Q7L592 441 aa16.46■□□□□ 0.23
SMARCAL1-209ENST00000444508 CROCCP2Q86T23 111 aa16.46■□□□□ 0.23
SMARCAL1-209ENST00000444508 SHISA5Q8N114 240 aa16.46■□□□□ 0.23
SMARCAL1-209ENST00000444508 GALNT16Q8N428 558 aa16.46■□□□□ 0.23
SMARCAL1-209ENST00000444508 CCNYL1Q8N7R7 359 aa16.46■□□□□ 0.23
SMARCAL1-209ENST00000444508 BANPQ8N9N5 519 aa16.46■□□□□ 0.23
SMARCAL1-209ENST00000444508 WDR20Q8TBZ3 569 aa16.46■□□□□ 0.23
SMARCAL1-209ENST00000444508 ADAMTS18Q8TE60 1221 aa16.46■□□□□ 0.23
SMARCAL1-209ENST00000444508 QRFPRQ96P65 431 aa16.46■□□□□ 0.23
SMARCAL1-209ENST00000444508 FRG2BQ96QU4 278 aa16.46■□□□□ 0.23
SMARCAL1-209ENST00000444508 OR51B5Q9H339 312 aa16.46■□□□□ 0.23
SMARCAL1-209ENST00000444508 ELOVL6Q9H5J4 265 aa16.46■□□□□ 0.23
SMARCAL1-209ENST00000444508 LANCL2Q9NS86 450 aa16.46■□□□□ 0.23
SMARCAL1-209ENST00000444508 PCDHGA9Q9Y5G4 932 aaKnown RBP16.46■□□□□ 0.23
SMARCAL1-209ENST00000444508 SMG1Q96Q15 3661 aaKnown RBP16.45■□□□□ 0.22
SMARCAL1-209ENST00000444508 CFAP46Q8IYW2 2715 aa16.45■□□□□ 0.22
SMARCAL1-209ENST00000444508 NSG1A0A0A6YYJ2 146 aa16.45■□□□□ 0.22
SMARCAL1-209ENST00000444508 CCDC151A5D8V7 595 aa16.45■□□□□ 0.22
SMARCAL1-209ENST00000444508 FOXE1O00358 373 aaPredicted RBP16.45■□□□□ 0.22
SMARCAL1-209ENST00000444508 SAP18O00422 153 aaKnown RBP16.45■□□□□ 0.22
SMARCAL1-209ENST00000444508 RGS16O15492 202 aaPredicted RBP16.45■□□□□ 0.22
SMARCAL1-209ENST00000444508 KLHL41O60662 606 aa16.45■□□□□ 0.22
SMARCAL1-209ENST00000444508 B4GALT2O60909 372 aa16.45■□□□□ 0.22
SMARCAL1-209ENST00000444508 CEACAM4O75871 244 aa16.45■□□□□ 0.22
SMARCAL1-209ENST00000444508 ITGA3P26006 1051 aa16.45■□□□□ 0.22
SMARCAL1-209ENST00000444508 CERS1P27544 350 aa16.45■□□□□ 0.22
SMARCAL1-209ENST00000444508 SSR2P43308 183 aa16.45■□□□□ 0.22
SMARCAL1-209ENST00000444508 RPS13P62277 151 aaKnown RBP16.45■□□□□ 0.22
SMARCAL1-209ENST00000444508 LCP2Q13094 533 aa16.45■□□□□ 0.22
SMARCAL1-209ENST00000444508 RCN2Q14257 317 aa16.45■□□□□ 0.22
SMARCAL1-209ENST00000444508 IRAK1BP1Q5VVH5 260 aa16.45■□□□□ 0.22
SMARCAL1-209ENST00000444508 TCTN3Q6NUS6 607 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms