RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.53□□□□□ -0.242e-7■■■■■ 278.5
SMARCA4-204ENST00000444061 OR5K2Q8NHB8 316 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 SLC38A4Q969I6 547 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 ZHX1-C8orf76Q96EF9 292 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 COL21A1Q96P44 957 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 SLC39A1Q9NY26 324 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 TAS2R9Q9NYW1 312 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 METTL12A8MUP2 240 aa13.52□□□□□ -0.24
SMARCA4-204ENST00000444061 SCDO00767 359 aa13.52□□□□□ -0.24
SMARCA4-204ENST00000444061 C6orf47O95873 294 aa13.52□□□□□ -0.24
SMARCA4-204ENST00000444061 RPLP0P05388 317 aaKnown RBP13.52□□□□□ -0.24
SMARCA4-204ENST00000444061 CISD3P0C7P0 127 aa13.52□□□□□ -0.24
SMARCA4-204ENST00000444061 GRK6P43250 576 aa13.52□□□□□ -0.24
SMARCA4-204ENST00000444061 DPTQ07507 201 aa13.52□□□□□ -0.24
SMARCA4-204ENST00000444061 C1DQ13901 141 aaKnown RBP13.52□□□□□ -0.24
SMARCA4-204ENST00000444061 PPP1R3BQ86XI6 285 aa13.52□□□□□ -0.24
SMARCA4-204ENST00000444061 C10orf82Q8WW14 230 aa13.52□□□□□ -0.24
SMARCA4-204ENST00000444061 CNDP2Q96KP4 475 aaKnown RBP13.52□□□□□ -0.24
SMARCA4-204ENST00000444061 CGREF1Q99674 301 aa13.52□□□□□ -0.24
SMARCA4-204ENST00000444061 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.52□□□□□ -0.241e-10■■■■■ 33
SMARCA4-204ENST00000444061 C3orf18Q9UK00 162 aa13.52□□□□□ -0.24
SMARCA4-204ENST00000444061 CHRM5P08912 532 aaPredicted RBP13.52□□□□□ -0.24
SMARCA4-204ENST00000444061 PTDSS1P48651 473 aaKnown RBP13.52□□□□□ -0.24
SMARCA4-204ENST00000444061 CLK1P49759 484 aaKnown RBP13.52□□□□□ -0.24
SMARCA4-204ENST00000444061 XIAPP98170 497 aa13.52□□□□□ -0.24
SMARCA4-204ENST00000444061 ABRAXAS2Q15018 415 aa13.52□□□□□ -0.24
SMARCA4-204ENST00000444061 NSDHLQ15738 373 aa13.52□□□□□ -0.24
SMARCA4-204ENST00000444061 HPS6Q86YV9 775 aa13.52□□□□□ -0.24
SMARCA4-204ENST00000444061 TEX47Q8TBZ9 253 aa13.52□□□□□ -0.24
SMARCA4-204ENST00000444061 N6AMT1Q9Y5N5 214 aa13.52□□□□□ -0.24
SMARCA4-204ENST00000444061 TMEM202A6NGA9 273 aa13.52□□□□□ -0.25
SMARCA4-204ENST00000444061 SHC2P98077 582 aa13.52□□□□□ -0.25
SMARCA4-204ENST00000444061 RUNX1T1Q06455 604 aa13.52□□□□□ -0.25
SMARCA4-204ENST00000444061 ALKBH2Q6NS38 261 aa13.52□□□□□ -0.25
SMARCA4-204ENST00000444061 ANKRD26P1Q6NSI1 321 aa13.52□□□□□ -0.25
SMARCA4-204ENST00000444061 METTL2BQ6P1Q9 378 aaKnown RBP13.52□□□□□ -0.25
SMARCA4-204ENST00000444061 ZNF605Q86T29 641 aa13.52□□□□□ -0.25
SMARCA4-204ENST00000444061 PIK3C3Q8NEB9 887 aa13.52□□□□□ -0.25
SMARCA4-204ENST00000444061 OR5M3Q8NGP4 307 aa13.52□□□□□ -0.25
SMARCA4-204ENST00000444061 FAM110BQ8TC76 370 aa13.52□□□□□ -0.25
SMARCA4-204ENST00000444061 NEIL2Q969S2 332 aa13.52□□□□□ -0.25
SMARCA4-204ENST00000444061 ARRDC1-AS1Q9H2J1 176 aa13.52□□□□□ -0.25
SMARCA4-204ENST00000444061 FADS2P1A8MWK0 482 aa13.52□□□□□ -0.25
SMARCA4-204ENST00000444061 I6L893 689 aaPredicted RBP13.52□□□□□ -0.25
SMARCA4-204ENST00000444061 UGDHO60701 494 aa13.52□□□□□ -0.25
SMARCA4-204ENST00000444061 COL9A2Q14055 689 aaPredicted RBP13.52□□□□□ -0.25
SMARCA4-204ENST00000444061 SCARB2Q14108 478 aa13.52□□□□□ -0.25
SMARCA4-204ENST00000444061 NCF4Q15080 339 aa13.52□□□□□ -0.25
SMARCA4-204ENST00000444061 PDCD4Q53EL6 469 aaKnown RBP13.52□□□□□ -0.25
SMARCA4-204ENST00000444061 PIP5KL1Q5T9C9 394 aa13.52□□□□□ -0.25
SMARCA4-204ENST00000444061 OR7G3Q8NG95 312 aa13.52□□□□□ -0.25
SMARCA4-204ENST00000444061 L3HYPDHQ96EM0 354 aa13.52□□□□□ -0.25
SMARCA4-204ENST00000444061 PDLIM5Q96HC4 596 aaKnown RBP13.52□□□□□ -0.25
SMARCA4-204ENST00000444061 ZDHHC5Q9C0B5 715 aa13.52□□□□□ -0.25
SMARCA4-204ENST00000444061 TM7SF3Q9NS93 570 aa13.52□□□□□ -0.25
SMARCA4-204ENST00000444061 AP1M2Q9Y6Q5 423 aa13.52□□□□□ -0.25
SMARCA4-204ENST00000444061 K7ESM1 405 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 CXCR6O00574 342 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 DRD2P14416 443 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 SLC7A1P30825 629 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 KCNJ2P63252 427 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 COMMD2Q86X83 199 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 GALNT12Q8IXK2 581 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 MICU2Q8IYU8 434 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 OR9I1Q8NGQ6 314 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 LRRC3Q9BY71 257 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 GRIP2Q9C0E4 1043 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 TPT1P8Q9HAU6 139 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 A0A1B0GW55 424 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 CTSLP07711 333 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 DUX4L2P0CJ85 424 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 DUX4L3P0CJ86 424 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 DUX4L4P0CJ87 422 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 DUX4L5P0CJ88 424 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 DUX4L6P0CJ89 424 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 DUX4L7P0CJ90 424 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 GSTM2P28161 218 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 DIO3P55073 304 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 CTC1Q2NKJ3 1217 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 BCL7AQ4VC05 210 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 IFI44LQ53G44 452 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 AGBL4Q5VU57 503 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 CEACAM20Q6UY09 585 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 C1orf210Q8IVY1 113 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 MOCOSQ96EN8 888 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 RMND5BQ96G75 393 aaPredicted RBP13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 GORASP1Q9BQQ3 440 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 ADI1Q9BV57 179 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 SERINC1Q9NRX5 453 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 WSB2Q9NYS7 404 aaPredicted RBP13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 DUX4Q9UBX2 424 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 GSC2O15499 205 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 FAM20BO75063 409 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 CNR2P34972 360 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 SIM1P81133 766 aaPredicted RBP13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 ENPP2Q13822 863 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 AMIGO2Q86SJ2 522 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 WDR60Q8WVS4 1066 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 CRB3Q9BUF7 120 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 PCED1AQ9H1Q7 454 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms