RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 PDHXO00330 501 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 TFP02787 698 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 PKMP14618 531 aaKnown RBP4.83□□□□□ -1.64
HERC1-201ENST00000443617 MAOBP27338 520 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 TPMTP51580 245 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 AP3S2P59780 193 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 TSTA3Q13630 321 aaPredicted RBP4.83□□□□□ -1.64
HERC1-201ENST00000443617 SLC22A10Q63ZE4 541 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 KCT2Q8NC54 265 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 GPR152Q8TDT2 470 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 FAM126AQ9BYI3 521 aaPredicted RBP4.83□□□□□ -1.64
HERC1-201ENST00000443617 CLMPQ9H6B4 373 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 COPZ2Q9P299 210 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 PTGFRNQ9P2B2 879 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 CFAP20Q9Y6A4 193 aaKnown RBP4.83□□□□□ -1.64
HERC1-201ENST00000443617 HLA-DPB1P04440 258 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 DGKAP23743 735 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 GIFP27352 417 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 PCGF2P35227 344 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 CLDN8P56748 225 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 FLI1Q01543 452 aaPredicted RBP4.83□□□□□ -1.64
HERC1-201ENST00000443617 TMEM132BQ14DG7 1078 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 DUSP6Q16828 381 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 RFTN2Q52LD8 501 aaPredicted RBP4.83□□□□□ -1.64
HERC1-201ENST00000443617 TFAP2EQ6VUC0 442 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 BTN2A2Q8WVV5 523 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 PDCD10Q9BUL8 212 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 B3GAT2Q9NPZ5 323 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 PGAP2Q9UHJ9 254 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 NUBP2Q9Y5Y2 271 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 PTPRCAPQ14761 206 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 C3orf38Q5JPI3 329 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 RETSATQ6NUM9 610 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 RGL4Q8IZJ4 473 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 OR52B6Q8NGF0 335 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 FANK1Q8TC84 345 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 DPYSL5Q9BPU6 564 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 H2AFY2Q9P0M6 372 aaPredicted RBP4.83□□□□□ -1.64
HERC1-201ENST00000443617 RGPD8O14715 1765 aaPredicted RBP4.83□□□□□ -1.64
HERC1-201ENST00000443617 TEX13CA0A0J9YWL9 993 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 ATG13O75143 517 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 GRK5P34947 590 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 MAP2K6P52564 334 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 CACNG1Q06432 222 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 C3P1Q6ZMU1 363 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 ZNF671Q8TAW3 534 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 ASZ1Q8WWH4 475 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 ATOH8Q96SQ7 321 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 ARL15Q9NXU5 204 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 CPA4Q9UI42 421 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 CACNG2Q9Y698 323 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 WWP2O00308 870 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 SLC28A2O43868 658 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 KDELR2P33947 212 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 RORAP35398 523 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 STAT5AP42229 794 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 MAGEA2P43356 314 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 PAN2Q504Q3 1202 aaKnown RBP4.83□□□□□ -1.64
HERC1-201ENST00000443617 TMEM81Q6P7N7 255 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 LIPIQ6XZB0 460 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 SYNPOQ8N3V7 929 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 ZNF419Q96HQ0 510 aaPredicted RBP4.83□□□□□ -1.64
HERC1-201ENST00000443617 TJP1Q07157 1748 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 SMIM28A0A1B0GU29 152 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 MAGEB17A8MXT2 336 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 TEX46H3BTG2 121 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 CLDN9O95484 217 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 RLN1P04808 185 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 SLC6A4P31645 630 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 PRMT2P55345 433 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 C10orf120Q5SQS8 335 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 MOSPD2Q8NHP6 518 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 CEP76Q8TAP6 659 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 GATAD2BQ8WXI9 593 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 GINS4Q9BRT9 223 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 TMED9Q9BVK6 235 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 ABCG8Q9H221 673 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 MCCC2Q9HCC0 563 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 UTS2RQ9UKP6 389 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 EDARQ9UNE0 448 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 ASB4Q9Y574 426 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 MFSD2BA6NFX1 497 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 GPR171O14626 319 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 SCAMP3O14828 347 aaKnown RBP4.83□□□□□ -1.64
HERC1-201ENST00000443617 SH3BGRLO75368 114 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 IQCF3P0C7M6 154 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 ZP3P21754 424 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 STARP49675 285 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 TAF1AQ15573 450 aaPredicted RBP4.83□□□□□ -1.64
HERC1-201ENST00000443617 GLYR1Q49A26 553 aaPredicted RBP4.83□□□□□ -1.64
HERC1-201ENST00000443617 ZNF366Q8N895 744 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 OR52E4Q8NGH9 312 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 GPR137Q96N19 417 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 OPALINQ96PE5 141 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 ANGPT4Q9Y264 503 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 HYKKA2RU49 373 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 PLA2G10O15496 165 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 TOXO94900 526 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 H2AFB2P0C5Z0 115 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 RHOQP17081 205 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms