RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 ZSWIM7Q19AV6 140 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 SLC9B1Q4ZJI4 515 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 MANEALQ5VSG8 457 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 SDHAF4Q5VUM1 108 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 BSPRYQ5W0U4 402 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 LRRC66Q68CR7 880 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 PLA2G4FQ68DD2 849 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 SEZ6L2Q6UXD5 910 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 USP53Q70EK8 1073 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 KRT25Q7Z3Z0 450 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 ATCAYQ86WG3 371 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 TGIF2LXQ8IUE1 241 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 DCUN1D3Q8IWE4 304 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 ADGRF4Q8IZF3 695 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 SETD9Q8NE22 299 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 TMIEQ8NEW7 156 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 STOML3Q8TAV4 291 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 RDH11Q8TC12 318 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 IGDCC4Q8TDY8 1250 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 NANOS1Q8WY41 292 aaKnown RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 CD101Q93033 1021 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 GAL3ST3Q96A11 431 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 SCRN2Q96FV2 425 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 OTUB1Q96FW1 271 aaPredicted RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 DUS3LQ96G46 650 aaKnown RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 DIRAS2Q96HU8 199 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 ZBED3Q96IU2 234 aaPredicted RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 QRFPRQ96P65 431 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 TEFMQ96QE5 360 aaKnown RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 HHIPQ96QV1 700 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 CPXM1Q96SM3 734 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 EGFL8Q99944 293 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 C7orf50Q9BRJ6 194 aaKnown RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 NTPCRQ9BSD7 190 aaKnown RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 MENTQ9BUN1 341 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 EDEM2Q9BV94 578 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 CEP41Q9BYV8 373 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 TMEM117Q9H0C3 514 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 MUC13Q9H3R2 512 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 SUV39H2Q9H5I1 410 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 WDR26Q9H7D7 661 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 AGO3Q9H9G7 860 aaKnown RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 ABCB9Q9NP78 766 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 ZSCAN32Q9NX65 697 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 NFKBIL1Q9UBC1 381 aaPredicted RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 NLKQ9UBE8 527 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 CD300AQ9UGN4 299 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 C3orf18Q9UK00 162 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 FBXO10Q9UK96 956 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 FBXL2Q9UKC9 423 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 DNPEPQ9ULA0 475 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 ST3GAL5Q9UNP4 418 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 ACANP16112 2415 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 TET1Q8NFU7 2136 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 CCDC163A0A0D9SF12 145 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 SLC22A23A1A5C7 686 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 A1L4Q6 167 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 FABP12A6NFH5 140 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 URADA6NGE7 173 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 METTL15A6NJ78 407 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 FAM74A7A6NL05 159 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 C4orf47A7E2U8 309 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 NEDD8-MDP1E9PL57 170 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 H0YAE9 185 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 GPR171O14626 319 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 KHNYNO15037 678 aaKnown RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 MBTPS2O43462 519 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 HYAL3O43820 417 aaPredicted RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 PMPCBO75439 489 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 UGT2B17O75795 530 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 LRIG2O94898 1065 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 GSRP00390 522 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 F9P00740 461 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 LGALS2P05162 132 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 SLC2A1P11166 492 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 HLA-EP13747 358 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 PDGFRAP16234 1089 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 HLA-DPA1P20036 260 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 IVDP26440 423 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 MAPK1P28482 360 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 OXTRP30559 389 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 HOXA7P31268 230 aaPredicted RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 FMO3P31513 532 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 CD86P42081 329 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 MAP2K3P46734 347 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 GLUD2P49448 558 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 STAT5BP51692 787 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 CASP7P55210 303 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 CDH8P55286 799 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 RRAS2P62070 204 aaPredicted RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 CHRNB3Q05901 458 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 TWF1Q12792 350 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 HYAL1Q12794 435 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 BIKQ13323 160 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 TNK1Q13470 666 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 MTMR1Q13613 665 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 DAG1Q14118 895 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 FASTKQ14296 549 aaKnown RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 ZNHIT3Q15649 155 aaPredicted RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 TIMM50Q3ZCQ8 353 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms