RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 ARMC10Q8N2F6 343 aa15.25■□□□□ 0.03
SNRPD3-204ENST00000439775 TMEM178AQ8NBL3 297 aa15.25■□□□□ 0.03
SNRPD3-204ENST00000439775 ARMC2Q8NEN0 867 aa15.25■□□□□ 0.03
SNRPD3-204ENST00000439775 ADAMTS18Q8TE60 1221 aa15.25■□□□□ 0.03
SNRPD3-204ENST00000439775 KIAA1191Q96A73 305 aa15.25■□□□□ 0.03
SNRPD3-204ENST00000439775 MS4A6EQ96DS6 147 aa15.25■□□□□ 0.03
SNRPD3-204ENST00000439775 WDR34Q96EX3 536 aa15.25■□□□□ 0.03
SNRPD3-204ENST00000439775 FAR2Q96K12 515 aa15.25■□□□□ 0.03
SNRPD3-204ENST00000439775 ANKRD10Q9NXR5 420 aa15.25■□□□□ 0.03
SNRPD3-204ENST00000439775 ASPDHA6ND91 283 aa15.24■□□□□ 0.03
SNRPD3-204ENST00000439775 FAM227AF5H4B4 570 aa15.24■□□□□ 0.03
SNRPD3-204ENST00000439775 ERI3O43414 337 aaKnown RBP15.24■□□□□ 0.03
SNRPD3-204ENST00000439775 ZG16O60844 167 aa15.24■□□□□ 0.03
SNRPD3-204ENST00000439775 STK16O75716 305 aa15.24■□□□□ 0.03
SNRPD3-204ENST00000439775 NEURL1O76050 574 aa15.24■□□□□ 0.03
SNRPD3-204ENST00000439775 CD46P15529 392 aa15.24■□□□□ 0.03
SNRPD3-204ENST00000439775 COL8A1P27658 744 aa15.24■□□□□ 0.03
SNRPD3-204ENST00000439775 EEF1DP29692 281 aaKnown RBP15.24■□□□□ 0.03
SNRPD3-204ENST00000439775 CASQ1P31415 396 aa15.24■□□□□ 0.03
SNRPD3-204ENST00000439775 STX2P32856 288 aa15.24■□□□□ 0.03
SNRPD3-204ENST00000439775 PLTPP55058 493 aa15.24■□□□□ 0.03
SNRPD3-204ENST00000439775 BTN3A2P78410 334 aa15.24■□□□□ 0.03
SNRPD3-204ENST00000439775 NAB1Q13506 487 aa15.24■□□□□ 0.03
SNRPD3-204ENST00000439775 PDK4Q16654 411 aa15.24■□□□□ 0.03
SNRPD3-204ENST00000439775 GRTP1Q5TC63 336 aa15.24■□□□□ 0.03
SNRPD3-204ENST00000439775 ZNF787Q6DD87 383 aa15.24■□□□□ 0.03
SNRPD3-204ENST00000439775 ZNF572Q7Z3I7 529 aaPredicted RBP15.24■□□□□ 0.03
SNRPD3-204ENST00000439775 RPS19BP1Q86WX3 136 aaKnown RBP15.24■□□□□ 0.03
SNRPD3-204ENST00000439775 SCUBE1Q8IWY4 988 aa15.24■□□□□ 0.03
SNRPD3-204ENST00000439775 CYP4X1Q8N118 509 aa15.24■□□□□ 0.03
SNRPD3-204ENST00000439775 KIF2BQ8N4N8 673 aa15.24■□□□□ 0.03
SNRPD3-204ENST00000439775 NFAM1Q8NET5 270 aaPredicted RBP15.24■□□□□ 0.03
SNRPD3-204ENST00000439775 OR2L5Q8NG80 312 aa15.24■□□□□ 0.03
SNRPD3-204ENST00000439775 FBXO25Q8TCJ0 367 aa15.24■□□□□ 0.03
SNRPD3-204ENST00000439775 PTCD3Q96EY7 689 aaKnown RBP15.24■□□□□ 0.03
SNRPD3-204ENST00000439775 RHBGQ9H310 441 aa15.24■□□□□ 0.03
SNRPD3-204ENST00000439775 TRIM45Q9H8W5 580 aaPredicted RBP15.24■□□□□ 0.03
SNRPD3-204ENST00000439775 NECTIN3Q9NQS3 549 aa15.24■□□□□ 0.03
SNRPD3-204ENST00000439775 PTBP2Q9UKA9 531 aaKnown RBP15.24■□□□□ 0.03
SNRPD3-204ENST00000439775 NOTCH2Q04721 2471 aa15.24■□□□□ 0.03
SNRPD3-204ENST00000439775 CROCCQ5TZA2 2017 aa15.23■□□□□ 0.03
SNRPD3-204ENST00000439775 SYNDIG1LA6NDD5 238 aa15.23■□□□□ 0.03
SNRPD3-204ENST00000439775 ANKDD1BA6NHY2 528 aa15.23■□□□□ 0.03
SNRPD3-204ENST00000439775 CLGNO14967 610 aa15.23■□□□□ 0.03
SNRPD3-204ENST00000439775 PRAMEF4O60810 478 aa15.23■□□□□ 0.03
SNRPD3-204ENST00000439775 MLYCDO95822 493 aa15.23■□□□□ 0.03
SNRPD3-204ENST00000439775 TBX6O95947 436 aaPredicted RBP15.23■□□□□ 0.03
SNRPD3-204ENST00000439775 SLC35E2BP0CK96 405 aa15.23■□□□□ 0.03
SNRPD3-204ENST00000439775 HSPA7P48741 367 aa15.23■□□□□ 0.03
SNRPD3-204ENST00000439775 HSD17B7P56937 341 aa15.23■□□□□ 0.03
SNRPD3-204ENST00000439775 OC90Q02509 493 aaPredicted RBP15.23■□□□□ 0.03
SNRPD3-204ENST00000439775 RBPJQ06330 500 aa15.23■□□□□ 0.03
SNRPD3-204ENST00000439775 E2F2Q14209 437 aa15.23■□□□□ 0.03
SNRPD3-204ENST00000439775 KBTBD12Q3ZCT8 623 aa15.23■□□□□ 0.03
SNRPD3-204ENST00000439775 PRAMEF9Q5VWM5 478 aa15.23■□□□□ 0.03
SNRPD3-204ENST00000439775 SPINK14Q6IE38 97 aa15.23■□□□□ 0.03
SNRPD3-204ENST00000439775 TRIM40Q6P9F5 258 aa15.23■□□□□ 0.03
SNRPD3-204ENST00000439775 ZDHHC24Q6UX98 284 aa15.23■□□□□ 0.03
SNRPD3-204ENST00000439775 LRRC70Q7Z2Q7 622 aa15.23■□□□□ 0.03
SNRPD3-204ENST00000439775 VN1R5Q7Z5H4 357 aa15.23■□□□□ 0.03
SNRPD3-204ENST00000439775 CTAGE3PQ8IX95 158 aa15.23■□□□□ 0.03
SNRPD3-204ENST00000439775 APCDD1LQ8NCL9 501 aa15.23■□□□□ 0.03
SNRPD3-204ENST00000439775 THAP3Q8WTV1 239 aaPredicted RBP15.23■□□□□ 0.03
SNRPD3-204ENST00000439775 CCT6BQ92526 530 aa15.23■□□□□ 0.03
SNRPD3-204ENST00000439775 FRMD6Q96NE9 622 aa15.23■□□□□ 0.03
SNRPD3-204ENST00000439775 QRFPRQ96P65 431 aa15.23■□□□□ 0.03
SNRPD3-204ENST00000439775 EFCAB11Q9BUY7 163 aa15.23■□□□□ 0.03
SNRPD3-204ENST00000439775 HES7Q9BYE0 225 aa15.23■□□□□ 0.03
SNRPD3-204ENST00000439775 REXO4Q9GZR2 422 aaKnown RBP15.23■□□□□ 0.03
SNRPD3-204ENST00000439775 CDCP1Q9H5V8 836 aa15.23■□□□□ 0.03
SNRPD3-204ENST00000439775 KLHL1Q9NR64 748 aa15.23■□□□□ 0.03
SNRPD3-204ENST00000439775 CD274Q9NZQ7 290 aa15.23■□□□□ 0.03
SNRPD3-204ENST00000439775 LRFN1Q9P244 771 aa15.23■□□□□ 0.03
SNRPD3-204ENST00000439775 RNF112Q9ULX5 631 aa15.23■□□□□ 0.03
SNRPD3-204ENST00000439775 PPIEQ9UNP9 301 aaKnown RBP15.23■□□□□ 0.03
SNRPD3-204ENST00000439775 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.23■□□□□ 0.03
SNRPD3-204ENST00000439775 SVILO95425 2214 aa15.23■□□□□ 0.03
SNRPD3-204ENST00000439775 CRYBG3Q68DQ2 2970 aa15.22■□□□□ 0.03
SNRPD3-204ENST00000439775 CELSR2Q9HCU4 2923 aa15.22■□□□□ 0.03
SNRPD3-204ENST00000439775 B3GALT2O43825 422 aa15.22■□□□□ 0.03
SNRPD3-204ENST00000439775 SLC25A12O75746 678 aa15.22■□□□□ 0.03
SNRPD3-204ENST00000439775 S100BP04271 92 aaPredicted RBP15.22■□□□□ 0.03
SNRPD3-204ENST00000439775 SP1P08047 785 aa15.22■□□□□ 0.03
SNRPD3-204ENST00000439775 CD22P20273 847 aa15.22■□□□□ 0.03
SNRPD3-204ENST00000439775 TPP2P29144 1249 aaPredicted RBP15.22■□□□□ 0.03
SNRPD3-204ENST00000439775 TRHRP34981 398 aaPredicted RBP15.22■□□□□ 0.03
SNRPD3-204ENST00000439775 CA7P43166 264 aa15.22■□□□□ 0.03
SNRPD3-204ENST00000439775 MAGEA4P43358 317 aa15.22■□□□□ 0.03
SNRPD3-204ENST00000439775 RAB38P57729 211 aa15.22■□□□□ 0.03
SNRPD3-204ENST00000439775 MLF1P58340 268 aa15.22■□□□□ 0.03
SNRPD3-204ENST00000439775 LAPTM5Q13571 262 aa15.22■□□□□ 0.03
SNRPD3-204ENST00000439775 RUNX2Q13950 521 aa15.22■□□□□ 0.03
SNRPD3-204ENST00000439775 DOC2AQ14183 400 aa15.22■□□□□ 0.03
SNRPD3-204ENST00000439775 TBCCQ15814 346 aa15.22■□□□□ 0.03
SNRPD3-204ENST00000439775 XKR6Q5GH73 641 aa15.22■□□□□ 0.03
SNRPD3-204ENST00000439775 PAGE2BQ5JRK9 111 aa15.22■□□□□ 0.03
SNRPD3-204ENST00000439775 SYT10Q6XYQ8 523 aa15.22■□□□□ 0.03
SNRPD3-204ENST00000439775 CCDC25Q86WR0 208 aa15.22■□□□□ 0.03
SNRPD3-204ENST00000439775 SLC34A3Q8N130 599 aa15.22■□□□□ 0.03
SNRPD3-204ENST00000439775 PPM1NQ8N819 430 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms