RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 PTOV1Q86YD1 416 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 VWA5B2Q8N398 1253 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 KIAA1958Q8N8K9 716 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 SLC37A3Q8NCC5 494 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 DENND6BQ8NEG7 585 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 SLC16A10Q8TF71 515 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 EPYCQ99645 322 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 NTMT1Q9BV86 223 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 SLA2Q9H6Q3 261 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 FAM120CQ9NX05 1096 aaKnown RBP8.7□□□□□ -1.02
COPB1-202ENST00000439561 ZNF224Q9NZL3 707 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 ENOPH1Q9UHY7 261 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 ANGPT4Q9Y264 503 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 DRGXA6NNA5 263 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 M0QZQ0 153 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 TSPAN4O14817 238 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 RGS13O14921 159 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 SCO1O75880 301 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 ATF4P18848 351 aaPredicted RBP8.7□□□□□ -1.02
COPB1-202ENST00000439561 SDC2P34741 201 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 CSKP41240 450 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 NSG1P42857 185 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 MAGEA2P43356 314 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 MAP2K3P46734 347 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 XKP51811 444 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 SLC16A1P53985 500 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 CRISP1P54107 249 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 PRKAG1P54619 331 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 SELENOWP63302 87 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 GALK2Q01415 458 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 MAP2K5Q13163 448 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 TAF1CQ15572 869 aaPredicted RBP8.7□□□□□ -1.02
COPB1-202ENST00000439561 MICAQ29983 383 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 COX20Q5RI15 118 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 ANXA8L1Q5VT79 327 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 RETSATQ6NUM9 610 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 TMIGD1Q6UXZ0 262 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 C16orf62Q7Z3J2 963 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 NLRP8Q86W28 1048 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 Q8N402 240 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 BRI3BPQ8WY22 251 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 TSSK6Q9BXA6 273 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 ZDHHC6Q9H6R6 413 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 TMEM39AQ9NV64 488 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 MCUBQ9NWR8 336 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 ZNF226Q9NYT6 803 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 SEC14L4Q9UDX3 406 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 SLC13A4Q9UKG4 626 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 RIMKLBQ9ULI2 386 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 SPATA2Q9UM82 520 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 GABRQQ9UN88 632 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 CORO2BQ9UQ03 480 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 NEUROG3Q9Y4Z2 214 aa8.7□□□□□ -1.02
COPB1-202ENST00000439561 PRAMEF33A0A0G2JMD5 474 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 A0A1B0GVC2 190 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 A6NIN4 97 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 PLD2O14939 933 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 MRPS14O60783 128 aaKnown RBP8.69□□□□□ -1.02
COPB1-202ENST00000439561 PRAMEF10O60809 474 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 TSPAN9O75954 239 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 BPIP17213 487 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 PTNP21246 168 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 PRKACBP22694 351 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 PPIBP23284 216 aaKnown RBP8.69□□□□□ -1.02
COPB1-202ENST00000439561 ACRV1P26436 265 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 APEX1P27695 318 aaKnown RBP8.69□□□□□ -1.02
COPB1-202ENST00000439561 HNF1BP35680 557 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 DDOSTP39656 456 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 MAN2A2P49641 1150 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 MEF2AQ02078 507 aaPredicted RBP8.69□□□□□ -1.02
COPB1-202ENST00000439561 GRB14Q14449 540 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 ZNF267Q14586 743 aaPredicted RBP8.69□□□□□ -1.02
COPB1-202ENST00000439561 DCST1Q5T197 706 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 SLX4IPQ5VYV7 408 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 ADNP2Q6IQ32 1131 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 ZNF852Q6ZMS4 543 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 LUZP2Q86TE4 346 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 CCDC190Q86UF4 302 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 NXPE1Q8N323 547 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 SIMC1Q8NDZ2 872 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 FAM46DQ8NEK8 389 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 POF1BQ8WVV4 589 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 RAB8BQ92930 207 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 TMEM159Q96B96 161 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 OTUB1Q96FW1 271 aaPredicted RBP8.69□□□□□ -1.02
COPB1-202ENST00000439561 TMEM80Q96HE8 168 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 FUBP3Q96I24 572 aaKnown RBP eCLIP8.69□□□□□ -1.02
COPB1-202ENST00000439561 UROC1Q96N76 676 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 TMED9Q9BVK6 235 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 GABARAPL1Q9H0R8 117 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 KLHL1Q9NR64 748 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 SEMA3GQ9NS98 782 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 CCL27Q9Y4X3 112 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 TRIP12Q14669 1992 aaPredicted RBP8.69□□□□□ -1.02
COPB1-202ENST00000439561 IGLV3-10A0A075B6K4 115 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 LOC102723532A0A0G2JNH3 316 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 GABRR3A8MPY1 467 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 GPC1P35052 558 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 MC1RQ01726 317 aa8.69□□□□□ -1.02
COPB1-202ENST00000439561 BNC1Q01954 994 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms