RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 OLR1P78380 273 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 LSM11P83369 360 aaKnown RBP eCLIP12.85□□□□□ -0.35
ACTN1-204ENST00000438964 BOP1Q14137 746 aaKnown RBP12.85□□□□□ -0.35
ACTN1-204ENST00000438964 SPHARQ15513 63 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 WSCD2Q2TBF2 565 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 FBXO43Q4G163 708 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 SLC35F1Q5T1Q4 408 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 PLAG1Q6DJT9 500 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 TLK2Q86UE8 772 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 MON1AQ86VX9 555 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 RASSF5Q8WWW0 418 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 P2RY12Q9H244 342 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 B3GAT2Q9NPZ5 323 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 FKBP14Q9NWM8 211 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 RAB23Q9ULC3 237 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 ISM1B1AKI9 464 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 CLDN7O95471 211 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 ALAS2P22557 587 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 ETV6P41212 452 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 PSEN2P49810 448 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 PTPN5P54829 565 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 TOR1AIP1Q5JTV8 583 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 FRMPD2BQ6IN97 320 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 ZNF367Q7RTV3 350 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 TAGAPQ8N103 731 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 THEM5Q8N1Q8 247 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 DNAJC5GQ8N7S2 189 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 GPRC5AQ8NFJ5 357 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 BEX1Q9HBH7 125 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 RNF181Q9P0P0 153 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 RABL2BQ9UNT1 228 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 MAN2B2Q9Y2E5 1009 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 HCN4Q9Y3Q4 1203 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 LOC285556D6RIA3 1793 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 PRAMEF33A0A0G2JMD5 474 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 MBLAC1A4D2B0 266 aaPredicted RBP12.84□□□□□ -0.35
ACTN1-204ENST00000438964 HPGDSO60760 199 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 PRAMEF10O60809 474 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 F2P00734 622 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 EPOP01588 193 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 SLC2A2P11168 524 aaPredicted RBP12.84□□□□□ -0.35
ACTN1-204ENST00000438964 PTGS2P35354 604 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 RGS4P49798 205 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 CDC42P60953 191 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 BCL2L1Q07817 233 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 IL18Q14116 193 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 ZNF284Q2VY69 593 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 ZNF57Q68EA5 555 aaPredicted RBP12.84□□□□□ -0.35
ACTN1-204ENST00000438964 RNF130Q86XS8 419 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 ZNF280BQ86YH2 543 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 Q8N402 240 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 TCEANCQ8N8B7 351 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 USP7Q93009 1102 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 C8orf48Q96LL4 319 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 MGME1Q9BQP7 344 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 DOHHQ9BU89 302 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 RACGAP1Q9H0H5 632 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 SPIN1Q9Y657 262 aaPredicted RBP12.84□□□□□ -0.35
ACTN1-204ENST00000438964 PLXNA4Q9HCM2 1894 aa12.84□□□□□ -0.35
ACTN1-204ENST00000438964 TRAV6A0A075B6T7 132 aa12.83□□□□□ -0.35
ACTN1-204ENST00000438964 F5H5T6 163 aa12.83□□□□□ -0.35
ACTN1-204ENST00000438964 TP53P04637 393 aaPredicted RBP12.83□□□□□ -0.35
ACTN1-204ENST00000438964 MSL3P1P0C860 447 aa12.83□□□□□ -0.35
ACTN1-204ENST00000438964 EBLN1P0CF75 366 aa12.83□□□□□ -0.35
ACTN1-204ENST00000438964 TNNI3P19429 210 aa12.83□□□□□ -0.35
ACTN1-204ENST00000438964 PTNP21246 168 aa12.83□□□□□ -0.35
ACTN1-204ENST00000438964 AVPR1BP47901 424 aa12.83□□□□□ -0.35
ACTN1-204ENST00000438964 CTBP2P56545 445 aa12.83□□□□□ -0.35
ACTN1-204ENST00000438964 MC1RQ01726 317 aa12.83□□□□□ -0.35
ACTN1-204ENST00000438964 TRIQKQ629K1 86 aa12.83□□□□□ -0.35
ACTN1-204ENST00000438964 OLIG3Q7RTU3 272 aa12.83□□□□□ -0.35
ACTN1-204ENST00000438964 VRK3Q8IV63 474 aa12.83□□□□□ -0.35
ACTN1-204ENST00000438964 ZBTB2Q8N680 514 aa12.83□□□□□ -0.35
ACTN1-204ENST00000438964 LSMEM1Q8N8F7 131 aa12.83□□□□□ -0.35
ACTN1-204ENST00000438964 C19orf18Q8NEA5 215 aa12.83□□□□□ -0.35
ACTN1-204ENST00000438964 DCLRE1CQ96SD1 692 aaKnown RBP12.83□□□□□ -0.35
ACTN1-204ENST00000438964 EPYCQ99645 322 aa12.83□□□□□ -0.35
ACTN1-204ENST00000438964 CRLS1Q9UJA2 301 aa12.83□□□□□ -0.35
ACTN1-204ENST00000438964 OARD1Q9Y530 152 aa12.83□□□□□ -0.35
ACTN1-204ENST00000438964 PLK4O00444 970 aa12.83□□□□□ -0.36
ACTN1-204ENST00000438964 DVL2O14641 736 aa12.83□□□□□ -0.36
ACTN1-204ENST00000438964 FABP7O15540 132 aa12.83□□□□□ -0.36
ACTN1-204ENST00000438964 SCN2BO60939 215 aa12.83□□□□□ -0.36
ACTN1-204ENST00000438964 ETHE1O95571 254 aa12.83□□□□□ -0.36
ACTN1-204ENST00000438964 ERP29P30040 261 aaKnown RBP12.83□□□□□ -0.36
ACTN1-204ENST00000438964 GJA5P36382 358 aa12.83□□□□□ -0.36
ACTN1-204ENST00000438964 CD79BP40259 229 aa12.83□□□□□ -0.36
ACTN1-204ENST00000438964 MICAQ29983 383 aa12.83□□□□□ -0.36
ACTN1-204ENST00000438964 TIMM50Q3ZCQ8 353 aa12.83□□□□□ -0.36
ACTN1-204ENST00000438964 RPS26P11Q5JNZ5 115 aaPredicted RBP12.83□□□□□ -0.36
ACTN1-204ENST00000438964 ATAT1Q5SQI0 421 aa12.83□□□□□ -0.36
ACTN1-204ENST00000438964 TYW3Q6IPR3 259 aaKnown RBP12.83□□□□□ -0.36
ACTN1-204ENST00000438964 USP30Q70CQ3 517 aa12.83□□□□□ -0.36
ACTN1-204ENST00000438964 FBXL6Q8N531 539 aa12.83□□□□□ -0.36
ACTN1-204ENST00000438964 SLC37A3Q8NCC5 494 aa12.83□□□□□ -0.36
ACTN1-204ENST00000438964 OR52P1PQ8NH57 321 aa12.83□□□□□ -0.36
ACTN1-204ENST00000438964 DACT3Q96B18 629 aaPredicted RBP12.83□□□□□ -0.36
ACTN1-204ENST00000438964 MAGEB10Q96LZ2 347 aaPredicted RBP12.83□□□□□ -0.36
ACTN1-204ENST00000438964 PSKH2Q96QS6 385 aa12.83□□□□□ -0.36
ACTN1-204ENST00000438964 TINF2Q9BSI4 451 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms