RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 ACADMP11310 421 aa2.35□□□□□ -2.03
HMGB1P18-201ENST00000438801 TMEM11P17152 192 aa2.35□□□□□ -2.03
HMGB1P18-201ENST00000438801 RBMS1P29558 406 aaKnown RBP2.35□□□□□ -2.03
HMGB1P18-201ENST00000438801 CDC25CP30307 473 aa2.35□□□□□ -2.03
HMGB1P18-201ENST00000438801 PPM1FP49593 454 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P18-201ENST00000438801 GSCP56915 257 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P18-201ENST00000438801 EIF4A2Q14240 407 aaKnown RBP2.35□□□□□ -2.03
HMGB1P18-201ENST00000438801 FKBP1CQ5VVH2 108 aa2.35□□□□□ -2.03
HMGB1P18-201ENST00000438801 Q6ZRP5 223 aa2.35□□□□□ -2.03
HMGB1P18-201ENST00000438801 PTAR1Q7Z6K3 402 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P18-201ENST00000438801 SMC5Q8IY18 1101 aa2.35□□□□□ -2.03
HMGB1P18-201ENST00000438801 DIS3L2Q8IYB7 885 aaKnown RBP2.35□□□□□ -2.03
HMGB1P18-201ENST00000438801 SLC39A11Q8N1S5 342 aa2.35□□□□□ -2.03
HMGB1P18-201ENST00000438801 MAPKAPK5-AS1Q8N8E1 139 aa2.35□□□□□ -2.03
HMGB1P18-201ENST00000438801 NIPA2Q8N8Q9 360 aa2.35□□□□□ -2.03
HMGB1P18-201ENST00000438801 WFDC11Q8NEX6 87 aa2.35□□□□□ -2.03
HMGB1P18-201ENST00000438801 SLCO2A1Q92959 643 aa2.35□□□□□ -2.03
HMGB1P18-201ENST00000438801 ARHGEF2Q92974 986 aaKnown RBP2.35□□□□□ -2.03
HMGB1P18-201ENST00000438801 AZIN2Q96A70 460 aa2.35□□□□□ -2.03
HMGB1P18-201ENST00000438801 ELMOD3Q96FG2 381 aa2.35□□□□□ -2.03
HMGB1P18-201ENST00000438801 ABHD6Q9BV23 337 aa2.35□□□□□ -2.03
HMGB1P18-201ENST00000438801 DGCR6LQ9BY27 220 aa2.35□□□□□ -2.03
HMGB1P18-201ENST00000438801 HHATLQ9HCP6 504 aa2.35□□□□□ -2.03
HMGB1P18-201ENST00000438801 CHST11Q9NPF2 352 aa2.35□□□□□ -2.03
HMGB1P18-201ENST00000438801 SETD4Q9NVD3 440 aa2.35□□□□□ -2.03
HMGB1P18-201ENST00000438801 LUZP4Q9P127 313 aa2.35□□□□□ -2.03
HMGB1P18-201ENST00000438801 RARRES3Q9UL19 164 aa2.35□□□□□ -2.03
HMGB1P18-201ENST00000438801 PNMA2Q9UL42 364 aa2.35□□□□□ -2.03
HMGB1P18-201ENST00000438801 HECTD4Q9Y4D8 3996 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 FRAS1Q86XX4 4008 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 PRSS51A0A1B0GVH4 220 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 A0A1W2PPR1 153 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 ESYT2A0FGR8 921 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 A6NLC8 198 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 ZNF195O14628 629 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 PIN1P1O15428 100 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 FLRT2O43155 660 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 IDH3BO43837 385 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 C22orf31O95567 290 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 SNAI1O95863 264 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 IGHV3-13P01766 116 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 EIF2S1P05198 315 aaKnown RBP2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 BCKDHBP21953 392 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 CA4P22748 312 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 CA6P23280 308 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 NMBRP28336 390 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 MMP12P39900 470 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 OPRL1P41146 370 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 LIMK2P53671 638 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 FKBP1AP62942 108 aaKnown RBP2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 G3BP1Q13283 466 aaKnown RBP eCLIP2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 SMC1AQ14683 1233 aaKnown RBP2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 FAM174BQ3ZCQ3 159 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 LACTB2Q53H82 288 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 LYSMD4Q5XG99 296 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 TPGS2Q68CL5 300 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 LINGO4Q6UY18 593 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 LPCAT2Q7L5N7 544 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 ADIPOR2Q86V24 386 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 ZNF354CQ86Y25 554 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 ZNF584Q8IVC4 421 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 ZNF519Q8TB69 540 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 ARHGAP45Q92619 1136 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 MTERF3Q96E29 417 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 C14orf79Q96F83 325 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 C1orf74Q96LT6 269 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 DACH2Q96NX9 599 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 PANK3Q9H999 370 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 CD209Q9NNX6 404 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 A4GALTQ9NPC4 353 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 SDR39U1Q9NRG7 319 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 PANK4Q9NVE7 773 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 EHD2Q9NZN4 543 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 OSGIN1Q9UJX0 560 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 PPP1R3CQ9UQK1 317 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 MTMR6Q9Y217 621 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 ANGPTL3Q9Y5C1 460 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 PIAS3Q9Y6X2 628 aa2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.34□□□□□ -2.03
HMGB1P18-201ENST00000438801 ASTN1O14525 1302 aa2.34□□□□□ -2.04
HMGB1P18-201ENST00000438801 CADP27708 2225 aa2.34□□□□□ -2.04
HMGB1P18-201ENST00000438801 PLXNB1O43157 2135 aa2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 PDCD11Q14690 1871 aaKnown RBP2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 LCE6AA0A183 80 aa2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 KLLNB2CW77 178 aa2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 JAK2O60674 1132 aa2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 IGKV3-15P01624 115 aa2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 RARGP13631 454 aa2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 PRG2P13727 222 aa2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 CCNE1P24864 410 aa2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 CASP6P55212 293 aa2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 BACE1P56817 501 aa2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 B3GALT5-AS1P59052 145 aa2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 HERV-K104P61576 105 aa2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 SNRPEP62304 92 aaKnown RBP2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 PNRC1Q12796 327 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 FASTKD3Q14CZ7 662 aaKnown RBP2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 MED22Q15528 200 aa2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 TBCEQ15813 527 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 KLHL26Q53HC5 615 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms