RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 AKAP8O43823 692 aaKnown RBP6.43□□□□□ -1.38
CSDE1-205ENST00000438362 JRKO75564 520 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 IFNGP01579 166 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 SOD2P04179 222 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 C1GALT1C1LP0DN25 315 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 RHCEP18577 417 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 RPL4P36578 427 aaKnown RBP6.43□□□□□ -1.38
CSDE1-205ENST00000438362 SPINT3P49223 89 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 NCBP2P52298 156 aaKnown RBP eCLIP6.43□□□□□ -1.38
CSDE1-205ENST00000438362 MEF2AQ02078 507 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-205ENST00000438362 ZNF33BQ06732 778 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 SMN1Q16637 294 aaKnown RBP6.43□□□□□ -1.38
CSDE1-205ENST00000438362 WSCD2Q2TBF2 565 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 CLEC12AQ5QGZ9 265 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 PLPP4Q5VZY2 271 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 CRTC1Q6UUV9 634 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 MARCH9Q86YJ5 346 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 ZNF366Q8N895 744 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 OR8H1Q8NGG4 311 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 OR8J1Q8NGP2 316 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 KAT2AQ92830 837 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 RGMAQ96B86 450 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 TESCQ96BS2 214 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 CXorf40BQ96DE9 158 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 YIPF4Q9BSR8 244 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 TSSK6Q9BXA6 273 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 SMURF1Q9HCE7 757 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 NKIRAS2Q9NYR9 191 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 IL36AQ9UHA7 158 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 CLEC4AQ9UMR7 237 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 ABCG2Q9UNQ0 655 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 CMAHPQ9Y471 501 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 XIRP1Q702N8 1843 aaKnown RBP6.43□□□□□ -1.38
CSDE1-205ENST00000438362 TLL1O43897 1013 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 OR5F1O95221 314 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 CSF2P04141 144 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 INHAP05111 366 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 AMD1P17707 334 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 TNFRSF1BP20333 461 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 UQCRC2P22695 453 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 CTNNB1P35222 781 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 ETV3P41162 512 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 CLCN7P51798 805 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 HK3P52790 923 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 ZXDBP98169 803 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 LGALS3BPQ08380 585 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 SLC9A5Q14940 896 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 RGNQ15493 299 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 ZNHIT3Q15649 155 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-205ENST00000438362 KIAA1161Q6NSJ0 714 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 SBSNQ6UWP8 590 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 DLEU7Q6UYE1 221 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 IKBIPQ70UQ0 350 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 PEX5LQ8IYB4 626 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 NAGSQ8N159 534 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 KLHL36Q8N4N3 616 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 OR52N2Q8NGI0 321 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 RHOXF1Q8NHV9 184 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 SMG7Q92540 1137 aaKnown RBP6.43□□□□□ -1.38
CSDE1-205ENST00000438362 GLYATL1Q969I3 302 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 NUS1Q96E22 293 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 BHLHE41Q9C0J9 482 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-205ENST00000438362 PAK6Q9NQU5 681 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-205ENST00000438362 MAT2BQ9NZL9 334 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 TAC3Q9UHF0 121 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 SLCO3A1Q9UIG8 710 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 ACSL6Q9UKU0 697 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 SLC27A6Q9Y2P4 619 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 PCDHGB6Q9Y5F9 930 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 BACE2Q9Y5Z0 518 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 PRSS21Q9Y6M0 314 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 FOCADQ5VW36 1801 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 KIAA1217Q5T5P2 1943 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 UBR3Q6ZT12 1888 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 SH3D21A4FU49 640 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 HTR3EA5X5Y0 456 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 SMAD6O43541 496 aaKnown RBP6.43□□□□□ -1.38
CSDE1-205ENST00000438362 HLA-DPB1P04440 258 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 HMGN1P05114 100 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 ALPPP05187 535 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 PIM1P11309 404 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-205ENST00000438362 CYBAP13498 195 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 PTPN2P17706 415 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 IDSP22304 550 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 HSD17B2P37059 387 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 PIGAP37287 484 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 PGFP49763 221 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 SELENOWP63302 87 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 ARF5P84085 180 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 GINS1Q14691 196 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 TBRG1Q3YBR2 411 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 RNASE12Q5GAN4 147 aaKnown RBP6.43□□□□□ -1.38
CSDE1-205ENST00000438362 MEDAGQ5VYS4 303 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 PRR23CQ6ZRP0 262 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 CBLL1Q75N03 491 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 SNX29P2Q8IUI4 249 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 CHPFQ8IZ52 775 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 SLC22A15Q8IZD6 547 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 TMEM151AQ8N4L1 468 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 GPR26Q8NDV2 337 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms