RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 MOSPD1Q9UJG1 213 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 MAN2B2Q9Y2E5 1009 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 WDFY3Q8IZQ1 3526 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 FAM220BPB1ANY3 271 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 FAM227AF5H4B4 570 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 H7BY64 318 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 SLC1A7O00341 560 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 MBTPS2O43462 519 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 ANGPTL1O95841 491 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 FABP3P05413 133 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 RRM2P31350 389 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 SOAT1P35610 550 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 MASP1P48740 699 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 PRLHRP49683 370 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 NUDT6P53370 316 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 AQP6Q13520 282 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 RGNQ15493 299 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 ZNF773Q6PK81 442 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 SZRD1Q7Z422 152 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 RNF130Q86XS8 419 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 CCDC71Q8IV32 467 aaPredicted RBP9.07□□□□□ -0.96
CUX1-206ENST00000437600 HDDC3Q8N4P3 179 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 CSGALNACT1Q8TDX6 532 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 JPH3Q8WXH2 748 aaPredicted RBP9.07□□□□□ -0.96
CUX1-206ENST00000437600 PRAP1Q96NZ9 151 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 ALOXE3Q9BYJ1 711 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 XKR8Q9H6D3 395 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 MBNL1Q9NR56 388 aaKnown RBP9.07□□□□□ -0.96
CUX1-206ENST00000437600 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.07□□□□□ -0.962e-10■■■■□ 23.5
CUX1-206ENST00000437600 TRIM64A6NGJ6 449 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 GLOD5A6NK44 160 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 SCAMP2O15127 329 aaKnown RBP9.07□□□□□ -0.96
CUX1-206ENST00000437600 MYO1DO94832 1006 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 FADS2O95864 444 aaKnown RBP9.07□□□□□ -0.96
CUX1-206ENST00000437600 ALPPL2P10696 532 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 GPX2P18283 190 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 MAPK1P28482 360 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 C21orf33P30042 268 aaPredicted RBP9.07□□□□□ -0.96
CUX1-206ENST00000437600 BMXP51813 675 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 TAS2R38P59533 333 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 SRSF11Q05519 484 aaKnown RBP9.07□□□□□ -0.96
CUX1-206ENST00000437600 LRRC74AQ0VAA2 488 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 NFATC3Q12968 1075 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 HTR4Q13639 388 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 EIF4HQ15056 248 aaKnown RBP9.07□□□□□ -0.96
CUX1-206ENST00000437600 NPTX1Q15818 432 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 CLPPQ16740 277 aaPredicted RBP9.07□□□□□ -0.96
CUX1-206ENST00000437600 SLC5A12Q1EHB4 618 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 GGTA1PQ4G0N0 100 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 PIP5KL1Q5T9C9 394 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 TMEM236Q5W0B7 351 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 MED27Q6P2C8 311 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 PRR23BQ6ZRT6 265 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 TCAIMQ8N3R3 496 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 TTC29Q8NA56 475 aaPredicted RBP9.07□□□□□ -0.96
CUX1-206ENST00000437600 ZNF540Q8NDQ6 660 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 PIK3C3Q8NEB9 887 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 OR13F1Q8NGS4 319 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 ADAMTS16Q8TE57 1224 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 RPL3LQ92901 407 aaKnown RBP9.07□□□□□ -0.96
CUX1-206ENST00000437600 RAB8BQ92930 207 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 F2RL3Q96RI0 385 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 NODALQ96S42 347 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 TBCCD1Q9NVR7 557 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 CUEDC1Q9NWM3 386 aaPredicted RBP9.07□□□□□ -0.96
CUX1-206ENST00000437600 THUMPD1Q9NXG2 353 aaKnown RBP9.07□□□□□ -0.96
CUX1-206ENST00000437600 KIF17Q9P2E2 1029 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 THAP10Q9P2Z0 257 aaPredicted RBP9.07□□□□□ -0.96
CUX1-206ENST00000437600 RUVBL1Q9Y265 456 aaKnown RBP9.07□□□□□ -0.96
CUX1-206ENST00000437600 PCDHB11Q9Y5F2 797 aa9.07□□□□□ -0.96
CUX1-206ENST00000437600 KIAA1549LQ6ZVL6 1849 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 CXorf51AA0A1B0GTR3 108 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 PRAMEF25A6NGN4 478 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 TRIM64CA6NLI5 447 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 TMEM229AB2RXF0 380 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 KPNA5O15131 536 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 ABCB7O75027 752 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 PAPLNO95428 1278 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 HOXD12P35452 270 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 IDH2P48735 452 aaKnown RBP9.06□□□□□ -0.96
CUX1-206ENST00000437600 PRIM2P49643 509 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 VBP1P61758 197 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 ELP6Q0PNE2 266 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 CST6Q15828 149 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 SYT16Q17RD7 645 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 Q6ZNX1 250 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 TSEN54Q7Z6J9 526 aaKnown RBP9.06□□□□□ -0.96
CUX1-206ENST00000437600 B3GNT8Q7Z7M8 397 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 AMER3Q8N944 861 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 TMIEQ8NEW7 156 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 NFKBIDQ8NI38 313 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 CHTF18Q8WVB6 975 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 C11orf24Q96F05 449 aaPredicted RBP9.06□□□□□ -0.96
CUX1-206ENST00000437600 PPP1R16AQ96I34 528 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 OSGEPL1Q9H4B0 414 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 EPS8L2Q9H6S3 715 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 TUBA8Q9NY65 449 aaPredicted RBP9.06□□□□□ -0.96
CUX1-206ENST00000437600 TAC3Q9UHF0 121 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 KLHL20Q9Y2M5 609 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 PLEKHM1Q9Y4G2 1056 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms