RNA–Protein interactions for RNA: ENST00000435953.2

AC004448.3-201, humanhuman

TSL 2 BASIC

Gene AC004448.3, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004448.3-201ENST00000435953 SDC1P18827 310 aa9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 ZNF10P21506 573 aaPredicted RBP9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 SSR2P43308 183 aa9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 ARSFP54793 590 aa9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 MTTPP55157 894 aa9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 NME5P56597 212 aa9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 CLDN8P56748 225 aa9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 STX1BP61266 288 aa9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 UFM1P61960 85 aa9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 TRA2BP62995 288 aaKnown RBP9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 SIM1P81133 766 aaPredicted RBP9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 FOXM1Q08050 763 aa9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 KLF10Q13118 480 aa9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 IL11RAQ14626 422 aa9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 SLC9A5Q14940 896 aa9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 MUM1Q2TAK8 710 aa9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 DEFB134Q4QY38 66 aa9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 YOD1Q5VVQ6 348 aaPredicted RBP9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 MRM1Q6IN84 353 aaKnown RBP9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 PAOXQ6QHF9 649 aa9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 C6orf89Q6UWU4 347 aa9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 TRPM8Q7Z2W7 1104 aa9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 CLNKQ7Z7G1 428 aa9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 NUDT13Q86X67 352 aa9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 CACTIN-AS1Q8N1I8 211 aa9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 ZCCHC7Q8N3Z6 543 aaKnown RBP9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 BMPERQ8N8U9 685 aa9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 TTC29Q8NA56 475 aaPredicted RBP9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 ZCCHC10Q8TBK6 192 aa9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 EGLN2Q96KS0 407 aa9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 TSSK3Q96PN8 268 aa9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 SERINC2Q96SA4 455 aa9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 CMKLR1Q99788 373 aa9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 EBPLQ9BY08 206 aa9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 ANKHQ9HCJ1 492 aa9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 TMEM45AQ9NWC5 275 aa9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 ZIM2Q9NZV7 527 aa9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 ARMCX1Q9P291 453 aa9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 RARRES3Q9UL19 164 aa9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 ASB4Q9Y574 426 aa9.38□□□□□ -0.91
AC004448.3-201ENST00000435953 CAPN14A8MX76 684 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 B4E171 279 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 SGK494L7N484 410 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 POLR1CO15160 346 aaPredicted RBP9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 SLC22A2O15244 555 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 FOXS1O43638 330 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 RRP9O43818 475 aaKnown RBP9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 B3GALT2O43825 422 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 TMPRSS11DO60235 418 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 PRMT3O60678 531 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 CSO75390 466 aaKnown RBP9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 SCELO95171 688 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 MED26O95402 600 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 FGF5P12034 268 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 CD1EP15812 388 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 PRPS1L1P21108 318 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 ALAS2P22557 587 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 PIK3R1P27986 724 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 HOXD11P31277 338 aaPredicted RBP9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 TSPAN7P41732 249 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 GSTM5P46439 218 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 ASMTP46597 345 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 GCGRP47871 477 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 MAPK12P53778 367 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 CLDN6P56747 220 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 TAS2R50P59544 299 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 C2orf80Q0P641 193 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 RUNX2Q13950 521 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 PTGR1Q14914 329 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 KRT72Q14CN4 511 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 AGKQ53H12 422 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 PRAMEF17Q5VTA0 474 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 FAM91A1Q658Y4 838 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 FAM71E1Q6IPT2 247 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 NIPAL1Q6NVV3 410 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 CYB5D1Q6P9G0 228 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 RIPOR1Q6ZS17 1223 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 PRSS41Q7RTY9 318 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 GPR180Q86V85 440 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 PDSS2Q86YH6 399 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 TREML1Q86YW5 311 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 FUNDC1Q8IVP5 155 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 RIMKLAQ8IXN7 391 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 KRTCAP2Q8N6L1 136 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 OR9A4Q8NGU2 314 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 CLHC1Q8NHS4 586 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 PROKR1Q8TCW9 393 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 TEX37Q96LM6 180 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 C10orf90Q96M02 699 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 DEPDC7Q96QD5 511 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 NDC1Q9BTX1 674 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 TUBB6Q9BUF5 446 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 NPLQ9BXD5 320 aaPredicted RBP9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 DPY30Q9C005 99 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 ACTL8Q9H568 366 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 COPS7BQ9H9Q2 264 aaPredicted RBP9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 CLK4Q9HAZ1 481 aaKnown RBP9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 CUTCQ9NTM9 273 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 SLC39A1Q9NY26 324 aa9.37□□□□□ -0.91
AC004448.3-201ENST00000435953 KCMF1Q9P0J7 381 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms