RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 TSPYL5Q86VY4 417 aaPredicted RBP10□□□□□ -0.81
CLSTN1-203ENST00000435891 MMP21Q8N119 569 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 ZNF480Q8WV37 535 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 PMEPA1Q969W9 287 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 DACT3Q96B18 629 aaPredicted RBP10□□□□□ -0.81
CLSTN1-203ENST00000435891 MOV10Q9HCE1 1003 aaKnown RBP10□□□□□ -0.81
CLSTN1-203ENST00000435891 AKIP1Q9NQ31 210 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 TPRKBQ9Y3C4 175 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 PCDHGA6Q9Y5G7 932 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 M0R129 80 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 KPNA5O15131 536 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 CXCL14O95715 111 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 ZNF30P17039 623 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 VEZF1Q14119 521 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 SYT16Q17RD7 645 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 SYT6Q5T7P8 510 aaPredicted RBP9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 ERICH5Q6P6B1 374 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 TECPR1Q7Z6L1 1165 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 P2RY8Q86VZ1 359 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 TRAM1L1Q8N609 369 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 GLYATL1Q969I3 302 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 ZSWIM3Q96MP5 696 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 YME1L1Q96TA2 773 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 CFHR5Q9BXR6 569 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 ZNF717Q9BY31 904 aaPredicted RBP9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 OR51B5Q9H339 312 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 SPHK2Q9NRA0 654 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 NDUFAF4Q9P032 175 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 SLC6A14Q9UN76 642 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 RGS10O43665 173 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 KLHL18O94889 574 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 TGFB1P01137 390 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 C9P02748 559 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 UBL4AP11441 157 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 HLA-EP13747 358 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 SYN1P17600 705 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 CRATP43155 626 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 SDE2Q6IQ49 451 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 SLCO4C1Q6ZQN7 724 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 REM2Q8IYK8 340 aaPredicted RBP9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 CPA6Q8N4T0 437 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 ZNF740Q8NDX6 193 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 OR4A15Q8NGL6 344 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 OR56A3Q8NH54 315 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 OR5AK3PQ8NH89 298 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 WDR48Q8TAF3 677 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 SPPL2AQ8TCT8 520 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 PROX1Q92786 737 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 SIGLEC11Q96RL6 698 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 FEVQ99581 238 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 APOL4Q9BPW4 351 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 RUBCNLQ9H714 662 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 OGDHLQ9ULD0 1010 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 RNF6Q9Y252 685 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 MGAT4DA6NG13 374 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 J3KTA2 159 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 SUV39H1O43463 412 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 HNF4AP41235 474 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 DCDC1P59894 354 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 TBPL1P62380 186 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 IFITM2Q01629 132 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 LIPIQ6XZB0 460 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 ASCC1Q8N9N2 400 aaKnown RBP9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 VN1R2Q8NFZ6 395 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 AP2M1Q96CW1 435 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 VPS35Q96QK1 796 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 ASPSCR1Q9BZE9 553 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 TMEM39AQ9NV64 488 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 SCN3BQ9NY72 215 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 LYVE1Q9Y5Y7 322 aa9.99□□□□□ -0.81
CLSTN1-203ENST00000435891 NINQ8N4C6 2090 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 CCDC88CQ9P219 2028 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 E9PQ18 207 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 PLK4O00444 970 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 AP2A2O94973 939 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 SEMA3DO95025 777 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 C6orf47O95873 294 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 CATP04040 527 aaKnown RBP9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 LINC00271P0C7V0 271 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 CYP2A6P11509 494 aaPredicted RBP9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 TIA1P31483 386 aaKnown RBP eCLIP9.98□□□□□ -0.813e-10■■■■■ 38.8
CLSTN1-203ENST00000435891 TGFBR2P37173 567 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 PRLHRP49683 370 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 NUDT6P53370 316 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 C21orf58P58505 322 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 ERVFC1P60507 584 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 CXCR4P61073 352 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 KCNC3Q14003 757 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 SYTL1Q8IYJ3 562 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 ST13P5Q8NFI4 369 aaPredicted RBP9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 COQ8BQ96D53 544 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 MED30Q96HR3 178 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 ZSCAN5AQ9BUG6 496 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 SORBS1Q9BX66 1292 aaKnown RBP9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 WDR12Q9GZL7 423 aaKnown RBP9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 ADPRHL2Q9NX46 363 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 GOLGA4Q13439 2230 aaKnown RBP9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 LINC00854A0A1B0GVQ3 168 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms