RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 TMIGD1Q6UXZ0 262 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 DCDC5Q6ZRR9 648 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 ERN2Q76MJ5 926 aaKnown RBP9.98□□□□□ -0.81
CD44-210ENST00000434472 PAGE2Q7Z2X7 111 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 PDZD3Q86UT5 571 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 FAM124AQ86V42 546 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 DCUN1D3Q8IWE4 304 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 ETFBKMTQ8IXQ9 262 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 TMCO5AQ8N6Q1 288 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 ZNF366Q8N895 744 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 OR4K1Q8NGD4 311 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 CXorf40AQ8TE69 158 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 PHF10Q8WUB8 498 aaKnown RBP9.98□□□□□ -0.81
CD44-210ENST00000434472 OR5P2Q8WZ92 322 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 SLC38A4Q969I6 547 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 MAL2Q969L2 176 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 PAWRQ96IZ0 340 aaKnown RBP9.98□□□□□ -0.81
CD44-210ENST00000434472 SIGLEC11Q96RL6 698 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 ITPAQ9BY32 194 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 PCBD2Q9H0N5 130 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 RHBGQ9H310 441 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 OR51B5Q9H339 312 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 NT5DC2Q9H857 520 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 MIEF1Q9NQG6 463 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 SPATA7Q9P0W8 599 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 DEC1Q9P2X7 70 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 PSORS1C1Q9UIG5 152 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 RNF6Q9Y252 685 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 TESMINQ9Y4I5 508 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 MYOFQ9NZM1 2061 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 ARRDC5A6NEK1 342 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 TMEM229AB2RXF0 380 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 MMP20O60882 483 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 SULT1C4O75897 302 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 KLK1P06870 262 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 HNRNPCP07910 306 aaKnown RBP eCLIP9.97□□□□□ -0.81
CD44-210ENST00000434472 IL3P08700 152 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 HLA-EP13747 358 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 AQP1P29972 269 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 SOAT1P35610 550 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 HMGA2P52926 109 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 DSTNP60981 165 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 TUBA1BP68363 451 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 TBCEQ15813 527 aaPredicted RBP9.97□□□□□ -0.81
CD44-210ENST00000434472 COX20Q5RI15 118 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 LAIR1Q6GTX8 287 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 ADAMTSL4Q6UY14 1074 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 FAM92BQ6ZTR7 304 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 TUBA1AQ71U36 451 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 TSEN54Q7Z6J9 526 aaKnown RBP9.97□□□□□ -0.81
CD44-210ENST00000434472 ZNF605Q86T29 641 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 SLC9B2Q86UD5 537 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 TRIM74Q86UV6 250 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 C17orf64Q86WR6 236 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 FAM129CQ86XR2 697 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 LGI4Q8N135 537 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 CENPSQ8N2Z9 138 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 DENND6BQ8NEG7 585 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 RHOXF1Q8NHV9 184 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 ING5Q8WYH8 240 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 TAMM41Q96BW9 452 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 FEVQ99581 238 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 PIP5K1AQ99755 562 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 MAPKAP1Q9BPZ7 522 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 AIF1LQ9BQI0 150 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 COPS4Q9BT78 406 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 OR52A5Q9H2C5 316 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 FBXO8Q9NRD0 319 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 RASSF1Q9NS23 344 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 SH2B3Q9UQQ2 575 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 ASF1AQ9Y294 204 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 PCDHGA2Q9Y5H1 932 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 DGKBQ9Y6T7 804 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 ENPP4Q9Y6X5 453 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 PTPRSQ13332 1948 aa9.97□□□□□ -0.81
CD44-210ENST00000434472 ANKDD1BA6NHY2 528 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 J3QRK9 145 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 CACNB4O00305 520 aaPredicted RBP9.96□□□□□ -0.81
CD44-210ENST00000434472 MAGEB3O15480 346 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 PCDHGA12O60330 932 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 MPZL2O60487 215 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 PDE9AO76083 593 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 KLHL18O94889 574 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 CCNB2O95067 398 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 NADKO95544 446 aaPredicted RBP9.96□□□□□ -0.81
CD44-210ENST00000434472 RHCEP18577 417 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 UGT2B10P36537 528 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 OPRL1P41146 370 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 XCR1P46094 333 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 GJA8P48165 433 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 CDH12P55289 794 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 PCBP3P57721 371 aaKnown RBP9.96□□□□□ -0.81
CD44-210ENST00000434472 MC1RQ01726 317 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 ITGADQ13349 1161 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 EXOC3L2Q2M3D2 409 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 ADPRMQ3LIE5 342 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 FBXO43Q4G163 708 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 TCEAL5Q5H9L2 206 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 DEPDC1Q5TB30 811 aa9.96□□□□□ -0.81
CD44-210ENST00000434472 REEP3Q6NUK4 255 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms