RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 HSH2DQ96JZ2 352 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 RAB9BQ9NP90 201 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 SLC17A5Q9NRA2 495 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 C2orf92A0A1B0GVN3 265 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 CCDC182A6NF36 153 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 OR51F1A6NGY5 319 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 TFE3P19532 575 aaPredicted RBP3.62□□□□□ -1.83
SHPRH-205ENST00000433355 ASB18Q6ZVZ8 466 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 SPARTQ8N0X7 666 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 CDRT4Q8N9R6 151 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 POC5Q8NA72 575 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 OR52N2Q8NGI0 321 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 CHPT1Q8WUD6 406 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 ADAMTS14Q8WXS8 1223 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 FIG4Q92562 907 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 RPL3LQ92901 407 aaKnown RBP3.62□□□□□ -1.83
SHPRH-205ENST00000433355 WACQ9BTA9 647 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 PDFQ9HBH1 243 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 CFAP97Q9P2B7 532 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 GMEB2Q9UKD1 530 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 CCRL2O00421 344 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 B3GALT2O43825 422 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 AHSGP02765 367 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 JUNDP17535 347 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 BMP7P18075 431 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 GCAP28676 217 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 GUCA1AP43080 201 aaPredicted RBP3.62□□□□□ -1.83
SHPRH-205ENST00000433355 AQP4P55087 323 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 UBE2MP61081 183 aaKnown RBP3.62□□□□□ -1.83
SHPRH-205ENST00000433355 SLC36A3Q495N2 470 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 C2CD6Q53TS8 623 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 PITRM1Q5JRX3 1037 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 PRAMEF14Q5SWL7 426 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 HENMT1Q5T8I9 393 aaKnown RBP3.62□□□□□ -1.83
SHPRH-205ENST00000433355 PRPF38BQ5VTL8 546 aaKnown RBP3.62□□□□□ -1.83
SHPRH-205ENST00000433355 PRAMEF13Q5VWM6 474 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 SPESP1Q6UW49 350 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 HSDL2Q6YN16 418 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 USP51Q70EK9 711 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 CTU1Q7Z7A3 348 aaKnown RBP3.62□□□□□ -1.83
SHPRH-205ENST00000433355 ZNF554Q86TJ5 538 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 TICAM1Q8IUC6 712 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 VRK3Q8IV63 474 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 KREMEN2Q8NCW0 462 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 OR13F1Q8NGS4 319 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 PYDC1Q8WXC3 89 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 ASB17Q8WXJ9 295 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 HMCESQ96FZ2 354 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 ZFP42Q96MM3 310 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 COG8Q96MW5 612 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 STACQ99469 402 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 SLC22A4Q9H015 551 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 MCUBQ9NWR8 336 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 ARMCX1Q9P291 453 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 NDOR1Q9UHB4 597 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 PSAT1Q9Y617 370 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 CCDC168Q8NDH2 2452 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 FZD6O60353 706 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 DHFRP00374 187 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 TSPAN19P0C672 248 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 AKAP5P24588 427 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 SSR2P43308 183 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 SLC15A1P46059 708 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 RGS8P57771 180 aaPredicted RBP3.62□□□□□ -1.83
SHPRH-205ENST00000433355 CRB2Q5IJ48 1285 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 SYPL2Q5VXT5 272 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 ZNF767PQ75MW2 155 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 SLC39A11Q8N1S5 342 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 PROKR2Q8NFJ6 384 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 KCTD4Q8WVF5 259 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 POLR1BQ9H9Y6 1135 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 GPN1Q9HCN4 374 aaPredicted RBP3.62□□□□□ -1.83
SHPRH-205ENST00000433355 AJAP1Q9UKB5 411 aaPredicted RBP3.62□□□□□ -1.83
SHPRH-205ENST00000433355 SLC6A5Q9Y345 797 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 TRIM17Q9Y577 477 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 ESPL1Q14674 2120 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 TSPAN9O75954 239 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 ECI1P42126 302 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 SLC6A12P48065 614 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 GLRBP48167 497 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 PPP3R1P63098 170 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 IL10RAQ13651 578 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 NPWQ8N729 165 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 DPF3Q92784 378 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 SERINC2Q96SA4 455 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 LMF2Q9BU23 707 aaKnown RBP3.62□□□□□ -1.83
SHPRH-205ENST00000433355 ITPAQ9BY32 194 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 REEP4Q9H6H4 257 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 GJD2Q9UKL4 321 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.62□□□□□ -1.83
SHPRH-205ENST00000433355 ETV7Q9Y603 341 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 LTBP2Q14767 1821 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 SCAMP2O15127 329 aaKnown RBP3.62□□□□□ -1.83
SHPRH-205ENST00000433355 OR2T1O43869 369 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 TCF4P15884 667 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 DGKEP52429 567 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 SUMO3P55854 103 aaPredicted RBP3.62□□□□□ -1.83
SHPRH-205ENST00000433355 AKAP14Q86UN6 197 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 MMAAQ8IVH4 418 aaKnown RBP3.62□□□□□ -1.83
SHPRH-205ENST00000433355 TMEM234Q8WY98 164 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms