RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 AADACL4Q5VUY2 407 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 GLB1LQ6UWU2 654 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 STRADAQ7RTN6 431 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 C3orf58Q8NDZ4 430 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 TRAPPC12Q8WVT3 735 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 CXorf40BQ96DE9 158 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 C1GALT1C1Q96EU7 318 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 TMEM248Q9NWD8 314 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 NUDT4Q9NZJ9 180 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 NLKQ9UBE8 527 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 BHLHE40O14503 412 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 GRIN3BO60391 1043 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 GTF2F2P13984 249 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 IGFALSP35858 605 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 SLC16A1P53985 500 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 AIMP2Q13155 320 aaKnown RBP7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 CAMK2GQ13555 558 aaPredicted RBP7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 SPRED3Q2MJR0 410 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 PAN2Q504Q3 1202 aaKnown RBP7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 RASGEF1AQ8N9B8 481 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 UXS1Q8NBZ7 420 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 GPR88Q9GZN0 384 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 APC2O95996 2303 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 IGLV3-22A0A075B6J6 115 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 YDJCA8MPS7 323 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 SORDQ00796 357 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 EFEMP1Q12805 493 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 PWP1Q13610 501 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 CARTPTQ16568 116 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 YIF1BQ5BJH7 314 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 VARS2Q5ST30 1063 aaKnown RBP7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 FKBP1CQ5VVH2 108 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 ARHGAP11AQ6P4F7 1023 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 DNAJC22Q8N4W6 341 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 TMBIM1Q969X1 311 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 CMBLQ96DG6 245 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 PKP4Q99569 1192 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 RGCCQ9H4X1 137 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 GMPR2Q9P2T1 348 aaKnown RBP7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 ERVK-18Q9QC07 812 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 PNMA8BQ9ULN7 279 aaPredicted RBP7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 LIPT1Q9Y234 373 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 AP2A1O95782 977 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 BDNFP23560 247 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 ARHGAP1Q07960 439 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 BTN1A1Q13410 526 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 IL34Q6ZMJ4 242 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 ZNF621Q6ZSS3 439 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 LYSMD3Q7Z3D4 306 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 GID4Q8IVV7 300 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 GPR151Q8TDV0 419 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 HASPINQ8TF76 798 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 WRAP53Q9BUR4 548 aaKnown RBP7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 ACSS2Q9NR19 701 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 TMEM218A2RU14 115 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 SMCO3A2RU48 225 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 PGLSO95336 258 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 GIPP09681 153 aaPredicted RBP7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 DDX6P26196 483 aaKnown RBP eCLIP7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 EIF2S3P41091 472 aaKnown RBP7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 CAPSQ13938 189 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 KCNAB1Q14722 419 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 HEPACAMQ14CZ8 416 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 STEAP3Q658P3 488 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 KLHL36Q8N4N3 616 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 ZNF384Q8TF68 577 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 CSPG4P5Q96PW8 444 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 SLCO5A1Q9H2Y9 848 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 EVA1AQ9H8M9 152 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 FAM118AQ9NWS6 357 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 WIF1Q9Y5W5 379 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 CXCR6O00574 342 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 AQP8O94778 261 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 DNTTP04053 509 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 CSF1P09603 554 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 H3F3AP84243 136 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 YIPF5Q969M3 257 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 ELP4Q96EB1 424 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 SLC2A11Q9BYW1 496 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 SOX17Q9H6I2 414 aaPredicted RBP7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 ZFP14Q9HCL3 533 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 OPTCQ9UBM4 332 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 CPOXP36551 454 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 FBXO48Q5FWF7 155 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 ZMAT1Q5H9K5 638 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 LRRC15Q8TF66 581 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 P2RY13Q9BPV8 354 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 CARS2Q9HA77 564 aaKnown RBP7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 BCO1Q9HAY6 547 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 PDP1Q9P0J1 537 aaPredicted RBP7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 TNFSF13BQ9Y275 285 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 RGPD3A6NKT7 1758 aaPredicted RBP7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 RGPD4Q7Z3J3 1758 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 TCRBV7S3A2A0A539 114 aa7.27□□□□□ -1.24
SYNPO2-202ENST00000429713 SLC12A8A0AV02 714 aa7.27□□□□□ -1.24
SYNPO2-202ENST00000429713 GXYLT2A0PJZ3 443 aa7.27□□□□□ -1.24
SYNPO2-202ENST00000429713 FAM149AA5PLN7 773 aa7.27□□□□□ -1.24
SYNPO2-202ENST00000429713 SLC15A5A6NIM6 579 aa7.27□□□□□ -1.24
SYNPO2-202ENST00000429713 ABCD4O14678 606 aa7.27□□□□□ -1.24
SYNPO2-202ENST00000429713 GPR182O15218 404 aa7.27□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms