RNA–Protein interactions for RNA: ENST00000428104.2

PDE6D-203, Transcript of phosphodiesterase 6D, humanhuman

TSL 3

Gene PDE6D, Length 627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-203ENST00000428104 RFPL3SP0C7P2 107 aa13.25□□□□□ -0.29
PDE6D-203ENST00000428104 CCL3P10147 92 aa13.25□□□□□ -0.29
PDE6D-203ENST00000428104 RBP3P10745 1247 aa13.25□□□□□ -0.29
PDE6D-203ENST00000428104 CYLC1P35663 651 aaPredicted RBP13.25□□□□□ -0.29
PDE6D-203ENST00000428104 SLC1A1P43005 524 aa13.25□□□□□ -0.29
PDE6D-203ENST00000428104 TRPC1P48995 793 aa13.25□□□□□ -0.29
PDE6D-203ENST00000428104 EIF3EP60228 445 aaKnown RBP13.25□□□□□ -0.29
PDE6D-203ENST00000428104 ZBED6P86452 979 aa13.25□□□□□ -0.29
PDE6D-203ENST00000428104 HERC3Q15034 1050 aa13.25□□□□□ -0.29
PDE6D-203ENST00000428104 STX1AQ16623 288 aa13.25□□□□□ -0.29
PDE6D-203ENST00000428104 CHRFAM7AQ494W8 412 aa13.25□□□□□ -0.29
PDE6D-203ENST00000428104 TSTD2Q5T7W7 516 aa13.25□□□□□ -0.29
PDE6D-203ENST00000428104 CAPN13Q6MZZ7 669 aaPredicted RBP13.25□□□□□ -0.29
PDE6D-203ENST00000428104 RTL4Q6ZR62 310 aa13.25□□□□□ -0.29
PDE6D-203ENST00000428104 RBM43Q6ZSC3 357 aaKnown RBP13.25□□□□□ -0.29
PDE6D-203ENST00000428104 AFAP1L2Q8N4X5 818 aa13.25□□□□□ -0.29
PDE6D-203ENST00000428104 ZNF740Q8NDX6 193 aa13.25□□□□□ -0.29
PDE6D-203ENST00000428104 THAP11Q96EK4 314 aa13.25□□□□□ -0.29
PDE6D-203ENST00000428104 VMP1Q96GC9 406 aa13.25□□□□□ -0.29
PDE6D-203ENST00000428104 CCDC77Q9BR77 488 aa13.25□□□□□ -0.29
PDE6D-203ENST00000428104 PRDM9Q9NQV7 894 aa13.25□□□□□ -0.29
PDE6D-203ENST00000428104 TMEM184CQ9NVA4 438 aa13.25□□□□□ -0.29
PDE6D-203ENST00000428104 SAMD15Q9P1V8 674 aa13.25□□□□□ -0.29
PDE6D-203ENST00000428104 KIAA1549Q9HCM3 1950 aa13.24□□□□□ -0.29
PDE6D-203ENST00000428104 DEFB108AA8MXU0 73 aa13.24□□□□□ -0.29
PDE6D-203ENST00000428104 PSTPIP1O43586 416 aa13.24□□□□□ -0.29
PDE6D-203ENST00000428104 ZFAND5O76080 213 aa13.24□□□□□ -0.29
PDE6D-203ENST00000428104 TP53P04637 393 aaPredicted RBP13.24□□□□□ -0.29
PDE6D-203ENST00000428104 SLC35G6P0C7Q6 338 aa13.24□□□□□ -0.29
PDE6D-203ENST00000428104 PPP2R1BP30154 601 aa13.24□□□□□ -0.29
PDE6D-203ENST00000428104 HSD17B2P37059 387 aa13.24□□□□□ -0.29
PDE6D-203ENST00000428104 PIGAP37287 484 aa13.24□□□□□ -0.29
PDE6D-203ENST00000428104 ADARP55265 1226 aaKnown RBP13.24□□□□□ -0.29
PDE6D-203ENST00000428104 PRAMEP78395 509 aa13.24□□□□□ -0.29
PDE6D-203ENST00000428104 GBX1Q14549 363 aa13.24□□□□□ -0.29
PDE6D-203ENST00000428104 SLC18A3Q16572 532 aa13.24□□□□□ -0.29
PDE6D-203ENST00000428104 AARS2Q5JTZ9 985 aaKnown RBP13.24□□□□□ -0.29
PDE6D-203ENST00000428104 CTSL3PQ5NE16 218 aa13.24□□□□□ -0.29
PDE6D-203ENST00000428104 HECTD2Q5U5R9 776 aa13.24□□□□□ -0.29
PDE6D-203ENST00000428104 SASS6Q6UVJ0 657 aa13.24□□□□□ -0.29
PDE6D-203ENST00000428104 LUZP2Q86TE4 346 aa13.24□□□□□ -0.29
PDE6D-203ENST00000428104 LRRC56Q8IYG6 542 aaPredicted RBP13.24□□□□□ -0.29
PDE6D-203ENST00000428104 OR52K1Q8NGK4 314 aa13.24□□□□□ -0.29
PDE6D-203ENST00000428104 NEIL3Q8TAT5 605 aa13.24□□□□□ -0.29
PDE6D-203ENST00000428104 PIGQQ9BRB3 760 aa13.24□□□□□ -0.29
PDE6D-203ENST00000428104 RHBGQ9H310 441 aa13.24□□□□□ -0.29
PDE6D-203ENST00000428104 GOLPH3Q9H4A6 298 aa13.24□□□□□ -0.29
PDE6D-203ENST00000428104 ZNF703Q9H7S9 590 aaPredicted RBP13.24□□□□□ -0.29
PDE6D-203ENST00000428104 PNO1Q9NRX1 252 aaKnown RBP13.24□□□□□ -0.29
PDE6D-203ENST00000428104 FAM114A2Q9NRY5 505 aa13.24□□□□□ -0.29
PDE6D-203ENST00000428104 SACM1LQ9NTJ5 587 aa13.24□□□□□ -0.29
PDE6D-203ENST00000428104 CATSPERZQ9NTU4 200 aa13.24□□□□□ -0.29
PDE6D-203ENST00000428104 SPTLC3Q9NUV7 552 aa13.24□□□□□ -0.29
PDE6D-203ENST00000428104 ZFATQ9P243 1243 aa13.24□□□□□ -0.29
PDE6D-203ENST00000428104 MYOTQ9UBF9 498 aa13.24□□□□□ -0.29
PDE6D-203ENST00000428104 SH2B3Q9UQQ2 575 aa13.24□□□□□ -0.29
PDE6D-203ENST00000428104 ATG4BQ9Y4P1 393 aa13.24□□□□□ -0.29
PDE6D-203ENST00000428104 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.24□□□□□ -0.29
PDE6D-203ENST00000428104 SVEP1Q4LDE5 3571 aa13.23□□□□□ -0.29
PDE6D-203ENST00000428104 AHRRA9YTQ3 701 aa13.23□□□□□ -0.29
PDE6D-203ENST00000428104 KCNAB3O43448 404 aa13.23□□□□□ -0.29
PDE6D-203ENST00000428104 SOX30O94993 753 aa13.23□□□□□ -0.29
PDE6D-203ENST00000428104 SYF2O95926 243 aaKnown RBP13.23□□□□□ -0.29
PDE6D-203ENST00000428104 CATP04040 527 aaKnown RBP13.23□□□□□ -0.29
PDE6D-203ENST00000428104 CTSSP25774 331 aa13.23□□□□□ -0.29
PDE6D-203ENST00000428104 OPRM1P35372 400 aa13.23□□□□□ -0.29
PDE6D-203ENST00000428104 TTPAP49638 278 aa13.23□□□□□ -0.29
PDE6D-203ENST00000428104 GPR143P51810 404 aa13.23□□□□□ -0.29
PDE6D-203ENST00000428104 EIF3BP55884 814 aaKnown RBP13.23□□□□□ -0.29
PDE6D-203ENST00000428104 ACVR1Q04771 509 aa13.23□□□□□ -0.29
PDE6D-203ENST00000428104 KCNJ11Q14654 390 aa13.23□□□□□ -0.29
PDE6D-203ENST00000428104 PARP6Q2NL67 630 aa13.23□□□□□ -0.29
PDE6D-203ENST00000428104 ACSBG2Q5FVE4 666 aa13.23□□□□□ -0.29
PDE6D-203ENST00000428104 C20orf204Q6ZNR8 217 aa13.23□□□□□ -0.29
PDE6D-203ENST00000428104 KATNAL2Q8IYT4 538 aa13.23□□□□□ -0.29
PDE6D-203ENST00000428104 RCOR2Q8IZ40 523 aa13.23□□□□□ -0.29
PDE6D-203ENST00000428104 MEIOBQ8N635 442 aa13.23□□□□□ -0.29
PDE6D-203ENST00000428104 HSPBAP1Q96EW2 488 aa13.23□□□□□ -0.29
PDE6D-203ENST00000428104 PIK3IP1Q96FE7 263 aa13.23□□□□□ -0.29
PDE6D-203ENST00000428104 PDLIM2Q96JY6 352 aa13.23□□□□□ -0.29
PDE6D-203ENST00000428104 GALPQ9UBC7 116 aa13.23□□□□□ -0.29
PDE6D-203ENST00000428104 ANAPC5Q9UJX4 755 aa13.23□□□□□ -0.29
PDE6D-203ENST00000428104 PPIEQ9UNP9 301 aaKnown RBP13.23□□□□□ -0.29
PDE6D-203ENST00000428104 TESMINQ9Y4I5 508 aa13.23□□□□□ -0.29
PDE6D-203ENST00000428104 ARHGAP21Q5T5U3 1957 aa13.23□□□□□ -0.29
PDE6D-203ENST00000428104 C15orf38-AP3S2A0A0A6YYH1 394 aa13.22□□□□□ -0.29
PDE6D-203ENST00000428104 NDUFS4O43181 175 aa13.22□□□□□ -0.29
PDE6D-203ENST00000428104 CTIFO43310 598 aaKnown RBP13.22□□□□□ -0.29
PDE6D-203ENST00000428104 TLX2O43763 284 aaPredicted RBP13.22□□□□□ -0.29
PDE6D-203ENST00000428104 ZNF354AO60765 605 aaPredicted RBP13.22□□□□□ -0.29
PDE6D-203ENST00000428104 NIPSNAP2O75323 286 aa13.22□□□□□ -0.29
PDE6D-203ENST00000428104 P04436 131 aa13.22□□□□□ -0.29
PDE6D-203ENST00000428104 ALOX12P18054 663 aa13.22□□□□□ -0.29
PDE6D-203ENST00000428104 ATP5DP30049 168 aa13.22□□□□□ -0.29
PDE6D-203ENST00000428104 CPA2P48052 419 aa13.22□□□□□ -0.29
PDE6D-203ENST00000428104 SRSF2Q01130 221 aaKnown RBP13.22□□□□□ -0.29
PDE6D-203ENST00000428104 NR1I3Q14994 352 aa13.22□□□□□ -0.29
PDE6D-203ENST00000428104 TERF2Q15554 542 aa13.22□□□□□ -0.29
PDE6D-203ENST00000428104 KLHL38Q2WGJ6 581 aa13.22□□□□□ -0.29
PDE6D-203ENST00000428104 RNF187Q5TA31 235 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms