RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 NT5CQ8TCD5 201 aa14.48□□□□□ -0.09
ACTB-204ENST00000425660 TM4SF19Q96DZ7 209 aa14.48□□□□□ -0.09
ACTB-204ENST00000425660 THAP11Q96EK4 314 aa14.48□□□□□ -0.09
ACTB-204ENST00000425660 REXO5Q96IC2 774 aaKnown RBP14.48□□□□□ -0.09
ACTB-204ENST00000425660 C17orf62Q9BQA9 187 aa14.48□□□□□ -0.09
ACTB-204ENST00000425660 KLHL31Q9H511 634 aa14.48□□□□□ -0.09
ACTB-204ENST00000425660 PIF1Q9H611 641 aa14.48□□□□□ -0.09
ACTB-204ENST00000425660 MIEF1Q9NQG6 463 aa14.48□□□□□ -0.09
ACTB-204ENST00000425660 PRDM7Q9NQW5 492 aa14.48□□□□□ -0.09
ACTB-204ENST00000425660 PRMT8Q9NR22 394 aaPredicted RBP14.48□□□□□ -0.09
ACTB-204ENST00000425660 KNL1Q8NG31 2342 aa14.47□□□□□ -0.09
ACTB-204ENST00000425660 EML5Q05BV3 1969 aa14.47□□□□□ -0.09
ACTB-204ENST00000425660 CROCCQ5TZA2 2017 aa14.47□□□□□ -0.09
ACTB-204ENST00000425660 SNRNP200O75643 2136 aaKnown RBP14.47□□□□□ -0.09
ACTB-204ENST00000425660 DHRS12A0PJE2 317 aa14.47□□□□□ -0.09
ACTB-204ENST00000425660 ELOVL7A1L3X0 281 aa14.47□□□□□ -0.09
ACTB-204ENST00000425660 B4DGG1 531 aa14.47□□□□□ -0.09
ACTB-204ENST00000425660 C4orf51C9J302 202 aa14.47□□□□□ -0.09
ACTB-204ENST00000425660 LMO7DNF2Z398 122 aa14.47□□□□□ -0.09
ACTB-204ENST00000425660 PPM1DO15297 605 aa14.47□□□□□ -0.09
ACTB-204ENST00000425660 NVLO15381 856 aaKnown RBP14.47□□□□□ -0.09
ACTB-204ENST00000425660 BCAT2O15382 392 aaPredicted RBP14.47□□□□□ -0.09
ACTB-204ENST00000425660 SCELO95171 688 aa14.47□□□□□ -0.09
ACTB-204ENST00000425660 EPN2O95208 641 aa14.47□□□□□ -0.09
ACTB-204ENST00000425660 SERPIND1P05546 499 aa14.47□□□□□ -0.09
ACTB-204ENST00000425660 UMPSP11172 480 aa14.47□□□□□ -0.09
ACTB-204ENST00000425660 TDGF1P13385 188 aa14.47□□□□□ -0.09
ACTB-204ENST00000425660 NCK1P16333 377 aa14.47□□□□□ -0.09
ACTB-204ENST00000425660 HIST1H1TP22492 207 aaPredicted RBP14.47□□□□□ -0.09
ACTB-204ENST00000425660 STXBP1P61764 594 aaKnown RBP14.47□□□□□ -0.09
ACTB-204ENST00000425660 SIGLEC14Q08ET2 396 aa14.47□□□□□ -0.09
ACTB-204ENST00000425660 SLC14A1Q13336 389 aa14.47□□□□□ -0.09
ACTB-204ENST00000425660 MTX3Q5HYI7 312 aa14.47□□□□□ -0.09
ACTB-204ENST00000425660 GLYATQ6IB77 296 aa14.47□□□□□ -0.09
ACTB-204ENST00000425660 ZNF621Q6ZSS3 439 aa14.47□□□□□ -0.09
ACTB-204ENST00000425660 ZNF551Q7Z340 670 aaPredicted RBP14.47□□□□□ -0.09
ACTB-204ENST00000425660 TRIM73Q86UV7 250 aa14.47□□□□□ -0.09
ACTB-204ENST00000425660 OOSP2Q86WS3 158 aa14.47□□□□□ -0.09
ACTB-204ENST00000425660 TICAM1Q8IUC6 712 aa14.47□□□□□ -0.09
ACTB-204ENST00000425660 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.47□□□□□ -0.097e-13■■■■□ 19.9
ACTB-204ENST00000425660 ZCCHC7Q8N3Z6 543 aaKnown RBP14.47□□□□□ -0.09
ACTB-204ENST00000425660 FAM47BQ8NA70 645 aa14.47□□□□□ -0.09
ACTB-204ENST00000425660 BAHD1Q8TBE0 780 aaPredicted RBP14.47□□□□□ -0.09
ACTB-204ENST00000425660 LMX1AQ8TE12 382 aa14.47□□□□□ -0.09
ACTB-204ENST00000425660 TBCDQ9BTW9 1192 aa14.47□□□□□ -0.09
ACTB-204ENST00000425660 EFHD1Q9BUP0 239 aa14.47□□□□□ -0.09
ACTB-204ENST00000425660 TAS2R7Q9NYW3 318 aa14.47□□□□□ -0.09
ACTB-204ENST00000425660 ZNF282Q9UDV7 671 aaPredicted RBP14.47□□□□□ -0.09
ACTB-204ENST00000425660 EVPLLA8MZ36 301 aa14.46□□□□□ -0.09
ACTB-204ENST00000425660 AQP9O43315 295 aa14.46□□□□□ -0.09
ACTB-204ENST00000425660 ERI3O43414 337 aaKnown RBP14.46□□□□□ -0.09
ACTB-204ENST00000425660 PEX1O43933 1283 aa14.46□□□□□ -0.09
ACTB-204ENST00000425660 NOBOXO60393 691 aa14.46□□□□□ -0.09
ACTB-204ENST00000425660 CTSVO60911 334 aa14.46□□□□□ -0.09
ACTB-204ENST00000425660 ABCB1P08183 1280 aaPredicted RBP14.46□□□□□ -0.09
ACTB-204ENST00000425660 ENGP17813 658 aa14.46□□□□□ -0.09
ACTB-204ENST00000425660 DDX5P17844 614 aaKnown RBP14.46□□□□□ -0.09
ACTB-204ENST00000425660 PPIBP23284 216 aaKnown RBP14.46□□□□□ -0.09
ACTB-204ENST00000425660 PSMA4P25789 261 aaKnown RBP14.46□□□□□ -0.09
ACTB-204ENST00000425660 SSR2P43308 183 aa14.46□□□□□ -0.09
ACTB-204ENST00000425660 CSNK1EP49674 416 aaKnown RBP14.46□□□□□ -0.09
ACTB-204ENST00000425660 HBA1P69905 142 aa14.46□□□□□ -0.09
ACTB-204ENST00000425660 PRSS53Q2L4Q9 553 aa14.46□□□□□ -0.09
ACTB-204ENST00000425660 OGFRL1Q5TC84 451 aaPredicted RBP14.46□□□□□ -0.09
ACTB-204ENST00000425660 MRM1Q6IN84 353 aaKnown RBP14.46□□□□□ -0.09
ACTB-204ENST00000425660 TRIM40Q6P9F5 258 aa14.46□□□□□ -0.09
ACTB-204ENST00000425660 OGFOD3Q6PK18 319 aa14.46□□□□□ -0.09
ACTB-204ENST00000425660 FIGLAQ6QHK4 219 aa14.46□□□□□ -0.09
ACTB-204ENST00000425660 ASPGQ86U10 573 aa14.46□□□□□ -0.09
ACTB-204ENST00000425660 ADGRG5Q8IZF4 528 aa14.46□□□□□ -0.09
ACTB-204ENST00000425660 ABCA7Q8IZY2 2146 aa14.46□□□□□ -0.09
ACTB-204ENST00000425660 ARL14Q8N4G2 192 aa14.46□□□□□ -0.09
ACTB-204ENST00000425660 AMER3Q8N944 861 aa14.46□□□□□ -0.09
ACTB-204ENST00000425660 TMEM102Q8N9M5 508 aaPredicted RBP14.46□□□□□ -0.09
ACTB-204ENST00000425660 ZFP90Q8TF47 636 aa14.46□□□□□ -0.09
ACTB-204ENST00000425660 ERVMER34-1Q9H9K5 563 aa14.46□□□□□ -0.09
ACTB-204ENST00000425660 COPS7BQ9H9Q2 264 aaPredicted RBP14.46□□□□□ -0.09
ACTB-204ENST00000425660 TPT1P8Q9HAU6 139 aa14.46□□□□□ -0.09
ACTB-204ENST00000425660 EVA1BQ9NVM1 165 aa14.46□□□□□ -0.09
ACTB-204ENST00000425660 EHD3Q9NZN3 535 aa14.46□□□□□ -0.09
ACTB-204ENST00000425660 A0A0J9YY10 115 aa14.45□□□□□ -0.1
ACTB-204ENST00000425660 CPSF4O95639 269 aaKnown RBP14.45□□□□□ -0.1
ACTB-204ENST00000425660 PDGFBP01127 241 aaPredicted RBP14.45□□□□□ -0.1
ACTB-204ENST00000425660 DRD2P14416 443 aa14.45□□□□□ -0.1
ACTB-204ENST00000425660 ATP5A1P25705 553 aaKnown RBP14.45□□□□□ -0.1
ACTB-204ENST00000425660 FRKP42685 505 aaPredicted RBP14.45□□□□□ -0.1
ACTB-204ENST00000425660 LSSP48449 732 aa14.45□□□□□ -0.1
ACTB-204ENST00000425660 POLE2P56282 527 aa14.45□□□□□ -0.1
ACTB-204ENST00000425660 GAB1Q13480 694 aa14.45□□□□□ -0.1
ACTB-204ENST00000425660 SLC9A5Q14940 896 aa14.45□□□□□ -0.1
ACTB-204ENST00000425660 CYP51A1Q16850 503 aa14.45□□□□□ -0.1
ACTB-204ENST00000425660 MICU2Q8IYU8 434 aa14.45□□□□□ -0.1
ACTB-204ENST00000425660 MMP21Q8N119 569 aa14.45□□□□□ -0.1
ACTB-204ENST00000425660 PAPD5Q8NDF8 572 aaKnown RBP14.45□□□□□ -0.1
ACTB-204ENST00000425660 GAL3ST3Q96A11 431 aa14.45□□□□□ -0.1
ACTB-204ENST00000425660 CIDECQ96AQ7 238 aaPredicted RBP14.45□□□□□ -0.1
ACTB-204ENST00000425660 FAM120BQ96EK7 910 aaKnown RBP14.45□□□□□ -0.1
ACTB-204ENST00000425660 NSMCE2Q96MF7 247 aa14.45□□□□□ -0.1
ACTB-204ENST00000425660 FCRL4Q96PJ5 515 aa14.45□□□□□ -0.1
ACTB-204ENST00000425660 PKP2Q99959 881 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms