RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 ZNF549Q6P9A3 640 aa11.45□□□□□ -0.58
HLA-DQB3-203ENST00000425319 KRT78Q8N1N4 520 aa11.45□□□□□ -0.58
HLA-DQB3-203ENST00000425319 OR56A3Q8NH54 315 aa11.45□□□□□ -0.58
HLA-DQB3-203ENST00000425319 MAGOHBQ96A72 148 aaKnown RBP11.45□□□□□ -0.58
HLA-DQB3-203ENST00000425319 SARAFQ96BY9 339 aa11.45□□□□□ -0.58
HLA-DQB3-203ENST00000425319 LINGO1Q96FE5 620 aa11.45□□□□□ -0.58
HLA-DQB3-203ENST00000425319 TREX2Q9BQ50 279 aaPredicted RBP11.45□□□□□ -0.58
HLA-DQB3-203ENST00000425319 POLDIP3Q9BY77 421 aaKnown RBP11.45□□□□□ -0.58
HLA-DQB3-203ENST00000425319 PELI2Q9HAT8 420 aa11.45□□□□□ -0.58
HLA-DQB3-203ENST00000425319 PPANQ9NQ55 473 aaKnown RBP11.45□□□□□ -0.58
HLA-DQB3-203ENST00000425319 PRTFDC1Q9NRG1 225 aa11.45□□□□□ -0.58
HLA-DQB3-203ENST00000425319 DNAJB12Q9NXW2 375 aaKnown RBP11.45□□□□□ -0.58
HLA-DQB3-203ENST00000425319 KCMF1Q9P0J7 381 aa11.45□□□□□ -0.58
HLA-DQB3-203ENST00000425319 SPACA6W5XKT8 324 aa11.45□□□□□ -0.58
HLA-DQB3-203ENST00000425319 ZCWPW2A0A1B0GU75 182 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 TCRBV7S3A2A0A539 114 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 NKX2-6A6NCS4 301 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 ANKDD1BA6NHY2 528 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 GOLGA8MH3BSY2 632 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 B3GALT2O43825 422 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 DIAPH2O60879 1101 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 FAM155BO75949 473 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 GUCA1CO95843 209 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 P04436 131 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 GABRA1P14867 456 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 PGAM1P18669 254 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 MAOAP21397 527 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 ACVR2AP27037 513 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 GSTM2P28161 218 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 MSX1P28360 303 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 RFC3P40938 356 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 SCTRP47872 440 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 MAN2A2P49641 1150 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 GPR85P60893 370 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 DHX9Q08211 1270 aaKnown RBP11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 HYAL2Q12891 473 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 SLC10A1Q14973 349 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 EFTUD2Q15029 972 aaKnown RBP eCLIP11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 CMPK2Q5EBM0 449 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 RNFT1Q5M7Z0 435 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 PAQR3Q6TCH7 311 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 OPN5Q6U736 354 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 IL20RBQ6UXL0 311 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 HSDL2Q6YN16 418 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 B3GNT6Q6ZMB0 384 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 CAND1Q86VP6 1230 aaKnown RBP11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 ZNF595Q8IYB9 648 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 ARMC10Q8N2F6 343 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 ACBD4Q8NC06 268 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 PSD4Q8NDX1 1056 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 GIMAP7Q8NHV1 300 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 UTP15Q8TED0 518 aaKnown RBP11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 CCT6BQ92526 530 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 PYCR2Q96C36 320 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 FBXL8Q96CD0 374 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 SGCZQ96LD1 299 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 EGFL8Q99944 293 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 FOXC2Q99958 501 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 FAM173AQ9BQD7 235 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 UCK2Q9BZX2 261 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 COPS7BQ9H9Q2 264 aaPredicted RBP11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 ALKBH4Q9NXW9 302 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 ADAMTS6Q9UKP5 1117 aa11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 CORO1CQ9ULV4 474 aaPredicted RBP11.44□□□□□ -0.58
HLA-DQB3-203ENST00000425319 TEP1Q99973 2627 aaKnown RBP11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 GOLGA6L10A0A0M3HER8 536 aa11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 ZNHIT1O43257 154 aa11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 KLK8O60259 260 aa11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 WDR1O75083 606 aa11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 TOXO94900 526 aa11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 CCDC175P0C221 793 aa11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 GNAZP19086 355 aa11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 DNAJA1P31689 397 aaKnown RBP11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 HNMTP50135 292 aa11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 DGKQP52824 942 aa11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 NUP107P57740 925 aa11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 STX4Q12846 297 aa11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 ILF2Q12905 390 aaKnown RBP11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 SIX1Q15475 284 aaPredicted RBP11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 SLC25A35Q3KQZ1 300 aa11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 TOR1AIP1Q5JTV8 583 aa11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 CATSPEREQ5SY80 951 aa11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 FAM45BPQ6NSW5 357 aa11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 NXPE4Q6UWF7 544 aa11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 RTL4Q6ZR62 310 aa11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 FAM47EQ6ZV65 393 aa11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 FRA10AC1Q70Z53 315 aa11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 THOC6Q86W42 341 aaKnown RBP11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 CCDC71Q8IV32 467 aaPredicted RBP11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 PPIL6Q8IXY8 311 aa11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 NKAPQ8N5F7 415 aaKnown RBP11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 AMER2Q8N7J2 671 aa11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 SPC24Q8NBT2 197 aa11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 C2CD4AQ8NCU7 369 aaPredicted RBP11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 SRFBP1Q8NEF9 429 aaKnown RBP11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 NFAM1Q8NET5 270 aaPredicted RBP11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 OR52N2Q8NGI0 321 aa11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 FAM45AQ8TCE6 357 aa11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 KIAA1191Q96A73 305 aa11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 SEC16BQ96JE7 1060 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms