RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 PLPPR4Q7Z2D5 763 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 KANSL1Q7Z3B3 1105 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 PRSS42Q7Z5A4 293 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 RNF130Q86XS8 419 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 LGI4Q8N135 537 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 SLAIN1Q8ND83 568 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 CREB3L4Q8TEY5 395 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 DNAJA4Q8WW22 397 aaPredicted RBP10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 ULK4Q96C45 1275 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 MS4A4AQ96JQ5 239 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 RTP3Q9BQQ7 232 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 SAV1Q9H4B6 383 aaPredicted RBP10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 FAM124BQ9H5Z6 455 aaPredicted RBP10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 C3orf14Q9HBI5 128 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 SLC35C2Q9NQQ7 365 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 FKBPLQ9UIM3 349 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 TMCC3Q9ULS5 477 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 RAI2Q9Y5P3 530 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 PDE4DIPQ5VU43 2346 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 A0A075B6Q4 140 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 PRRG1O14668 218 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 GABRDO14764 452 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 LYRM1O43325 122 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 RENBPP51606 427 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 AKR1D1P51857 326 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 OLR1P78380 273 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 CSTF3Q12996 717 aaKnown RBP10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 ATXN7L2Q5T6C5 722 aaPredicted RBP10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 LCN1P1Q5VSP4 162 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 ATG9BQ674R7 924 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 TSEN54Q7Z6J9 526 aaKnown RBP10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 TMEM145Q8NBT3 493 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 CD200R1Q8TD46 325 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 TMEM40Q8WWA1 233 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 PITX2Q99697 317 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 UBQLN1Q9UMX0 589 aaKnown RBP10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 MRPS7Q9Y2R9 242 aaKnown RBP10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 TRBV5-3A0A0A0MS03 114 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 A0A0A6YYJ9 748 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 C2orf78A6NCI8 922 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 INMT-MINDY4F8WBC2 141 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 IFNA16P05015 189 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 LGALS2P05162 132 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 HOXD4P09016 255 aaPredicted RBP10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 KELP23276 732 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 PTPN6P29350 595 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 HMGCLP35914 325 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 FBXO43Q4G163 708 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 CTSL3PQ5NE16 218 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 OR2G6Q5TZ20 316 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 MTFR2Q6P444 385 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 SLC27A1Q6PCB7 646 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 CNIH2Q6PI25 160 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 ZNF782Q6ZMW2 699 aaPredicted RBP10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 SHFQ7M4L6 423 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 CFAP52Q8N1V2 620 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 ZNF366Q8N895 744 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 OR52P1PQ8NH57 321 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 ARRDC2Q8TBH0 407 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 FAM126AQ9BYI3 521 aaPredicted RBP10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 IFT22Q9H7X7 185 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 PLEKHB1Q9UF11 243 aaPredicted RBP10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 ELF5Q9UKW6 265 aaPredicted RBP10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 CLEC4AQ9UMR7 237 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 FNDC1Q4ZHG4 1894 aaPredicted RBP10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 ARPC4-TTLL3A0A0A6YYG9 625 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 H3BRB1 525 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 FPGTO14772 594 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 SYN3O14994 580 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 YY2O15391 372 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 SEC14L5O43304 696 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 RGS14O43566 566 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 RGS11O94810 467 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 MPC2O95563 127 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 PLATP00750 562 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 VSX2P58304 361 aaPredicted RBP10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 RPS14P62263 151 aaKnown RBP10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 TEKQ02763 1124 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 CRYZQ08257 329 aaKnown RBP10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 DDX39BQ13838 428 aaKnown RBP10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 ARHGEF7Q14155 803 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 SPHARQ15513 63 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 PTOV1Q86YD1 416 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 MIB1Q86YT6 1006 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 CCDC117Q8IWD4 279 aaPredicted RBP10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 ZZZ3Q8IYH5 903 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 MDGA1Q8NFP4 955 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 OR52E4Q8NGH9 312 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 PIH1D2Q8WWB5 315 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 KCTD13Q8WZ19 329 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 ST8SIA4Q92187 359 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 RADILQ96JH8 1075 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 PPP3R2Q96LZ3 170 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 ARNT2Q9HBZ2 717 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 PCDHGC4Q9Y5F7 938 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 PCDHGA2Q9Y5H1 932 aa10.84□□□□□ -0.67
SEC61A1-202ENST00000424880 CASTOR2A6NHX0 329 aa10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 STX16O14662 325 aa10.83□□□□□ -0.68
SEC61A1-202ENST00000424880 KPNA5O15131 536 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms