RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 ONECUT1Q9UBC0 465 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 UXTQ9UBK9 157 aaPredicted RBP3.5□□□□□ -1.85
SF3B1-205ENST00000424674 COPS7AQ9UBW8 275 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 FOXJ3Q9UPW0 622 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 ERVK-11Q9UQG0 969 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 ERVK-19Q9WJR5 959 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 B3GNT3Q9Y2A9 372 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 PIGLQ9Y2B2 252 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 GRIP1Q9Y3R0 1128 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 MAD1L1Q9Y6D9 718 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 KIAA1217Q5T5P2 1943 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 NINLQ9Y2I6 1382 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 ASTN2O75129 1339 aaPredicted RBP3.49□□□□□ -1.85
SF3B1-205ENST00000424674 IQANK1A0A1B0GTG1 560 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.49□□□□□ -1.85
SF3B1-205ENST00000424674 A0A1W2PPV4 95 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 TMEM89A2RUT3 159 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 ANKUB1A6NFN9 424 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 ASB14A6NK59 587 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 PDZK1P1A8MUH7 402 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 C9JVG2 144 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 EEF2KO00418 725 aaKnown RBP3.49□□□□□ -1.85
SF3B1-205ENST00000424674 NR5A2O00482 541 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 INPPL1O15357 1258 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 PSMD3O43242 534 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 CALUO43852 315 aaPredicted RBP3.49□□□□□ -1.85
SF3B1-205ENST00000424674 SSX4O60224 188 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 DFNA5O60443 496 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 PMPCBO75439 489 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 ATP5HO75947 161 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 CABYRO75952 493 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 C1QL1O75973 258 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 VNN1O95497 513 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 NFATC1O95644 943 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 MOCS2O96007 188 aaPredicted RBP3.49□□□□□ -1.85
SF3B1-205ENST00000424674 GLAP06280 429 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 CSN3P07498 182 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 ETFAP13804 333 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 AKR1A1P14550 325 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 AMD1P17707 334 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 HNF1AP20823 631 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 NMBRP28336 390 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 GABRA5P31644 462 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 PRDX2P32119 198 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 EVI2BP34910 448 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 PTGFRP43088 359 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 NAMPTP43490 491 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 CSNK1EP49674 416 aaKnown RBP3.49□□□□□ -1.85
SF3B1-205ENST00000424674 FHITP49789 147 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 AGTR2P50052 363 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 HNRNPMP52272 730 aaKnown RBP eCLIP3.49□□□□□ -1.85
SF3B1-205ENST00000424674 ARHGDIAP52565 204 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 DSTNP60981 165 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 SNRPEP62304 92 aaKnown RBP3.49□□□□□ -1.85
SF3B1-205ENST00000424674 RAB11AP62491 216 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 PPP2R2BQ00005 443 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 CNTN2Q02246 1040 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 HYAL1Q12794 435 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 TRAF1Q13077 416 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 CUL3Q13618 768 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 GPR176Q14439 515 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 RAB11BQ15907 218 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 BCL2A1Q16548 175 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 HKDC1Q2TB90 917 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 AMZ1Q400G9 498 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 XKR7Q5GH72 579 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 PDZK1Q5T2W1 519 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 TEDDM1Q5T9Z0 273 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 VWA5B1Q5TIE3 1220 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 SPECC1LQ69YQ0 1117 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 SP5Q6BEB4 398 aaPredicted RBP3.49□□□□□ -1.85
SF3B1-205ENST00000424674 TMEM225Q6GV28 225 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 SLC25A25Q6KCM7 469 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 TRIM65Q6PJ69 517 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 KYAT3Q6YP21 454 aaKnown RBP3.49□□□□□ -1.85
SF3B1-205ENST00000424674 CDHR3Q6ZTQ4 885 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 FRA10AC1Q70Z53 315 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 IRF2BP2Q7Z5L9 587 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 ADGRD2Q7Z7M1 963 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 HAPLN4Q86UW8 402 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 KLBQ86Z14 1044 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 TGIF2LXQ8IUE1 241 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 ZDHHC17Q8IUH5 632 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 CDKL3Q8IVW4 592 aaPredicted RBP3.49□□□□□ -1.85
SF3B1-205ENST00000424674 FAM114A1Q8IWE2 563 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 CADM3Q8N126 398 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 RYBPQ8N488 228 aaPredicted RBP3.49□□□□□ -1.85
SF3B1-205ENST00000424674 LRRC17Q8N6Y2 441 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 C7orf57Q8NEG2 295 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 BEST2Q8NFU1 509 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 RDM1Q8NG50 284 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 OR4K14Q8NGD5 310 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 OR5D13Q8NGL4 314 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 CDC26Q8NHZ8 85 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 RAET1EQ8TD07 263 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 TFAP2BQ92481 460 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 PIGBQ92521 554 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 GGHQ92820 318 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 TNFRSF14Q92956 283 aa3.49□□□□□ -1.85
SF3B1-205ENST00000424674 STAMBPL1Q96FJ0 436 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms