RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 NIPAL1Q6NVV3 410 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 TMIGD1Q6UXZ0 262 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 FRA10AC1Q70Z53 315 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 CMC1Q7Z7K0 106 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 ZNF227Q86WZ6 799 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 SCUBE1Q8IWY4 988 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 PDPRQ8NCN5 879 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 TMEM52Q8NDY8 209 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 CDKL2Q92772 493 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 GAL3ST3Q96A11 431 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 MS4A6EQ96DS6 147 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 WDR34Q96EX3 536 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 SCMH1Q96GD3 660 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 ZNF354BQ96LW1 612 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 MAGEB10Q96LZ2 347 aaPredicted RBP10.35□□□□□ -0.75
SSBP3-206ENST00000420121 PTCHD1Q96NR3 888 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 NT5DC2Q9H857 520 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 KCNK13Q9HB14 408 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 GPRC5BQ9NZH0 403 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 ABI3Q9P2A4 366 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 TEKT2Q9UIF3 430 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 PTBP2Q9UKA9 531 aaKnown RBP10.35□□□□□ -0.75
SSBP3-206ENST00000420121 PCDHGB6Q9Y5F9 930 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 A0A0G2JN53 185 aa10.34□□□□□ -0.75
SSBP3-206ENST00000420121 HMX2A2RU54 273 aa10.34□□□□□ -0.75
SSBP3-206ENST00000420121 URADA6NGE7 173 aa10.34□□□□□ -0.75
SSBP3-206ENST00000420121 SAGE2PA6NJ88 616 aa10.34□□□□□ -0.75
SSBP3-206ENST00000420121 PRMT3O60678 531 aa10.34□□□□□ -0.75
SSBP3-206ENST00000420121 NEURL1O76050 574 aa10.34□□□□□ -0.75
SSBP3-206ENST00000420121 UQCRHP07919 91 aa10.34□□□□□ -0.75
SSBP3-206ENST00000420121 RNH1P13489 461 aaKnown RBP10.34□□□□□ -0.75
SSBP3-206ENST00000420121 STMN1P16949 149 aa10.34□□□□□ -0.75
SSBP3-206ENST00000420121 MAGEA4P43358 317 aa10.34□□□□□ -0.75
SSBP3-206ENST00000420121 SLC12A2P55011 1212 aa10.34□□□□□ -0.75
SSBP3-206ENST00000420121 ATP6V0D1P61421 351 aa10.34□□□□□ -0.75
SSBP3-206ENST00000420121 SKP1P63208 163 aa10.34□□□□□ -0.75
SSBP3-206ENST00000420121 MEP1AQ16819 746 aa10.34□□□□□ -0.75
SSBP3-206ENST00000420121 ZNF766Q5HY98 468 aa10.34□□□□□ -0.75
SSBP3-206ENST00000420121 GRTP1Q5TC63 336 aa10.34□□□□□ -0.75
SSBP3-206ENST00000420121 ISCA2Q86U28 154 aa10.34□□□□□ -0.75
SSBP3-206ENST00000420121 GPSM1Q86YR5 675 aa10.34□□□□□ -0.75
SSBP3-206ENST00000420121 ARMC10Q8N2F6 343 aa10.34□□□□□ -0.75
SSBP3-206ENST00000420121 FBF1Q8TES7 1133 aa10.34□□□□□ -0.75
SSBP3-206ENST00000420121 KIAA1191Q96A73 305 aa10.34□□□□□ -0.75
SSBP3-206ENST00000420121 TSPAN17Q96FV3 270 aa10.34□□□□□ -0.75
SSBP3-206ENST00000420121 ATOH8Q96SQ7 321 aa10.34□□□□□ -0.75
SSBP3-206ENST00000420121 EHD1Q9H4M9 534 aa10.34□□□□□ -0.75
SSBP3-206ENST00000420121 PRDM9Q9NQV7 894 aa10.34□□□□□ -0.75
SSBP3-206ENST00000420121 IGSF5Q9NSI5 407 aa10.34□□□□□ -0.75
SSBP3-206ENST00000420121 ZDHHC18Q9NUE0 388 aa10.34□□□□□ -0.75
SSBP3-206ENST00000420121 DNAJC11Q9NVH1 559 aa10.34□□□□□ -0.75
SSBP3-206ENST00000420121 ANKRD10Q9NXR5 420 aa10.34□□□□□ -0.75
SSBP3-206ENST00000420121 WWOXQ9NZC7 414 aa10.34□□□□□ -0.75
SSBP3-206ENST00000420121 ESYT3A0FGR9 886 aa10.33□□□□□ -0.76
SSBP3-206ENST00000420121 ASPDHA6ND91 283 aa10.33□□□□□ -0.76
SSBP3-206ENST00000420121 GABRR3A8MPY1 467 aa10.33□□□□□ -0.76
SSBP3-206ENST00000420121 ERI3O43414 337 aaKnown RBP10.33□□□□□ -0.76
SSBP3-206ENST00000420121 CLEC3AO75596 197 aa10.33□□□□□ -0.76
SSBP3-206ENST00000420121 STK16O75716 305 aa10.33□□□□□ -0.76
SSBP3-206ENST00000420121 RASAL1O95294 804 aa10.33□□□□□ -0.76
SSBP3-206ENST00000420121 MTHFD2P13995 350 aa10.33□□□□□ -0.76
SSBP3-206ENST00000420121 HOXB1P14653 301 aaPredicted RBP10.33□□□□□ -0.76
SSBP3-206ENST00000420121 GSTM2P28161 218 aa10.33□□□□□ -0.76
SSBP3-206ENST00000420121 SPRP35270 261 aaPredicted RBP10.33□□□□□ -0.76
SSBP3-206ENST00000420121 GPR143P51810 404 aa10.33□□□□□ -0.76
SSBP3-206ENST00000420121 STXBP1P61764 594 aaKnown RBP10.33□□□□□ -0.76
SSBP3-206ENST00000420121 BTN3A2P78410 334 aa10.33□□□□□ -0.76
SSBP3-206ENST00000420121 CAV1Q03135 178 aa10.33□□□□□ -0.76
SSBP3-206ENST00000420121 ACTN3Q08043 901 aaPredicted RBP10.33□□□□□ -0.76
SSBP3-206ENST00000420121 DOC2AQ14183 400 aa10.33□□□□□ -0.76
SSBP3-206ENST00000420121 OR1C1Q15619 314 aa10.33□□□□□ -0.76
SSBP3-206ENST00000420121 ZNF787Q6DD87 383 aa10.33□□□□□ -0.76
SSBP3-206ENST00000420121 SPINK14Q6IE38 97 aa10.33□□□□□ -0.76
SSBP3-206ENST00000420121 SULT1C3Q6IMI6 304 aa10.33□□□□□ -0.76
SSBP3-206ENST00000420121 UBE3DQ7Z6J8 389 aa10.33□□□□□ -0.76
SSBP3-206ENST00000420121 CCDC25Q86WR0 208 aa10.33□□□□□ -0.76
SSBP3-206ENST00000420121 CTAGE3PQ8IX95 158 aa10.33□□□□□ -0.76
SSBP3-206ENST00000420121 CENPLQ8N0S6 344 aaPredicted RBP10.33□□□□□ -0.76
SSBP3-206ENST00000420121 LGI4Q8N135 537 aa10.33□□□□□ -0.76
SSBP3-206ENST00000420121 TCAIMQ8N3R3 496 aa10.33□□□□□ -0.76
SSBP3-206ENST00000420121 PPM1NQ8N819 430 aa10.33□□□□□ -0.76
SSBP3-206ENST00000420121 APCDD1LQ8NCL9 501 aa10.33□□□□□ -0.76
SSBP3-206ENST00000420121 TTLQ8NG68 377 aa10.33□□□□□ -0.76
SSBP3-206ENST00000420121 OR2L5Q8NG80 312 aa10.33□□□□□ -0.76
SSBP3-206ENST00000420121 DNAJB8Q8NHS0 232 aa10.33□□□□□ -0.76
SSBP3-206ENST00000420121 RELTQ969Z4 430 aa10.33□□□□□ -0.76
SSBP3-206ENST00000420121 SEC16BQ96JE7 1060 aa10.33□□□□□ -0.76
SSBP3-206ENST00000420121 HS3ST6Q96QI5 342 aa10.33□□□□□ -0.76
SSBP3-206ENST00000420121 NPLQ9BXD5 320 aaPredicted RBP10.33□□□□□ -0.76
SSBP3-206ENST00000420121 PITHD1Q9GZP4 211 aaPredicted RBP10.33□□□□□ -0.76
SSBP3-206ENST00000420121 RAB17Q9H0T7 212 aa10.33□□□□□ -0.76
SSBP3-206ENST00000420121 RHBGQ9H310 441 aa10.33□□□□□ -0.76
SSBP3-206ENST00000420121 CDCP1Q9H5V8 836 aa10.33□□□□□ -0.76
SSBP3-206ENST00000420121 TRIM45Q9H8W5 580 aaPredicted RBP10.33□□□□□ -0.76
SSBP3-206ENST00000420121 PRDM7Q9NQW5 492 aa10.33□□□□□ -0.76
SSBP3-206ENST00000420121 ZNF223Q9UK11 482 aaPredicted RBP10.33□□□□□ -0.76
SSBP3-206ENST00000420121 PPIEQ9UNP9 301 aaKnown RBP10.33□□□□□ -0.76
SSBP3-206ENST00000420121 UTP11Q9Y3A2 253 aaKnown RBP10.33□□□□□ -0.76
SSBP3-206ENST00000420121 MMACHCQ9Y4U1 282 aa10.33□□□□□ -0.76
SSBP3-206ENST00000420121 APCP25054 2843 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms