RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 HTR1EP28566 365 aa13.23□□□□□ -0.29
LINC01006-202ENST00000418309 GRNP28799 593 aaKnown RBP13.23□□□□□ -0.29
LINC01006-202ENST00000418309 TNFRSF8P28908 595 aa13.23□□□□□ -0.29
LINC01006-202ENST00000418309 MLF1P58340 268 aa13.23□□□□□ -0.29
LINC01006-202ENST00000418309 SLBPQ14493 270 aaKnown RBP eCLIP13.23□□□□□ -0.29
LINC01006-202ENST00000418309 TMIGD1Q6UXZ0 262 aa13.23□□□□□ -0.29
LINC01006-202ENST00000418309 SPPL2CQ8IUH8 684 aa13.23□□□□□ -0.29
LINC01006-202ENST00000418309 MCEMP1Q8IX19 187 aa13.23□□□□□ -0.29
LINC01006-202ENST00000418309 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.23□□□□□ -0.29
LINC01006-202ENST00000418309 KRT78Q8N1N4 520 aa13.23□□□□□ -0.29
LINC01006-202ENST00000418309 TTLQ8NG68 377 aa13.23□□□□□ -0.29
LINC01006-202ENST00000418309 RHBDF1Q96CC6 855 aa13.23□□□□□ -0.29
LINC01006-202ENST00000418309 FRMD6Q96NE9 622 aa13.23□□□□□ -0.29
LINC01006-202ENST00000418309 KRT12Q99456 494 aa13.23□□□□□ -0.29
LINC01006-202ENST00000418309 RHOJQ9H4E5 214 aa13.23□□□□□ -0.29
LINC01006-202ENST00000418309 PRM3Q9NNZ6 103 aa13.23□□□□□ -0.29
LINC01006-202ENST00000418309 PNO1Q9NRX1 252 aaKnown RBP13.23□□□□□ -0.29
LINC01006-202ENST00000418309 TXNDC16Q9P2K2 825 aa13.23□□□□□ -0.29
LINC01006-202ENST00000418309 ANKDD1BA6NHY2 528 aa13.22□□□□□ -0.29
LINC01006-202ENST00000418309 C4orf51C9J302 202 aa13.22□□□□□ -0.29
LINC01006-202ENST00000418309 CDK2AP1O14519 115 aa13.22□□□□□ -0.29
LINC01006-202ENST00000418309 ERI3O43414 337 aaKnown RBP13.22□□□□□ -0.29
LINC01006-202ENST00000418309 MYO1DO94832 1006 aa13.22□□□□□ -0.29
LINC01006-202ENST00000418309 SNRPB2P08579 225 aaKnown RBP13.22□□□□□ -0.29
LINC01006-202ENST00000418309 ABOP16442 354 aa13.22□□□□□ -0.29
LINC01006-202ENST00000418309 RPL21P46778 160 aaKnown RBP13.22□□□□□ -0.29
LINC01006-202ENST00000418309 CLCN2P51788 898 aa13.22□□□□□ -0.29
LINC01006-202ENST00000418309 SMSP52788 366 aa13.22□□□□□ -0.29
LINC01006-202ENST00000418309 MRPS25P82663 173 aaKnown RBP13.22□□□□□ -0.29
LINC01006-202ENST00000418309 POU4F1Q01851 419 aa13.22□□□□□ -0.29
LINC01006-202ENST00000418309 XKRXQ6PP77 449 aa13.22□□□□□ -0.29
LINC01006-202ENST00000418309 BNC2Q6ZN30 1099 aaPredicted RBP13.22□□□□□ -0.29
LINC01006-202ENST00000418309 SLCO4C1Q6ZQN7 724 aa13.22□□□□□ -0.29
LINC01006-202ENST00000418309 SPATA6LQ8N4H0 392 aa13.22□□□□□ -0.29
LINC01006-202ENST00000418309 BBOF1Q8ND07 529 aa13.22□□□□□ -0.29
LINC01006-202ENST00000418309 PYROXD1Q8WU10 500 aa13.22□□□□□ -0.29
LINC01006-202ENST00000418309 GAL3ST3Q96A11 431 aa13.22□□□□□ -0.29
LINC01006-202ENST00000418309 CAPS2Q9BXY5 557 aa13.22□□□□□ -0.29
LINC01006-202ENST00000418309 AICDAQ9GZX7 198 aa13.22□□□□□ -0.29
LINC01006-202ENST00000418309 CAB39LQ9H9S4 337 aa13.22□□□□□ -0.29
LINC01006-202ENST00000418309 CHST11Q9NPF2 352 aa13.22□□□□□ -0.29
LINC01006-202ENST00000418309 PRTFDC1Q9NRG1 225 aa13.22□□□□□ -0.29
LINC01006-202ENST00000418309 WWOXQ9NZC7 414 aa13.22□□□□□ -0.29
LINC01006-202ENST00000418309 FBXW2Q9UKT8 454 aa13.22□□□□□ -0.29
LINC01006-202ENST00000418309 MTO1Q9Y2Z2 717 aaKnown RBP13.22□□□□□ -0.29
LINC01006-202ENST00000418309 MMACHCQ9Y4U1 282 aa13.22□□□□□ -0.29
LINC01006-202ENST00000418309 MYO9AB2RTY4 2548 aa13.22□□□□□ -0.29
LINC01006-202ENST00000418309 GTF3C1Q12789 2109 aa13.22□□□□□ -0.29
LINC01006-202ENST00000418309 PCNX1Q96RV3 2341 aa13.22□□□□□ -0.29
LINC01006-202ENST00000418309 A0A088AWK7 358 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 IGKV3D-11A0A0A0MRZ8 115 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 TRBV11-1A0A0K0K1C0 115 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 E7ESA3 106 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 CLDN4O14493 209 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 CLGNO14967 610 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 TP73O15350 636 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 ZNHIT1O43257 154 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 B3GALT2O43825 422 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 NME2P1O60361 137 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 CCDC166P0CW27 439 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 ZNF24P17028 368 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 ZNF10P21506 573 aaPredicted RBP13.21□□□□□ -0.29
LINC01006-202ENST00000418309 NME2P22392 152 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 SSTR1P30872 391 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 SLC6A12P48065 614 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 HLCSP50747 726 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 PLA2G16P53816 162 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 ILF2Q12905 390 aaKnown RBP13.21□□□□□ -0.29
LINC01006-202ENST00000418309 CALCOCO2Q13137 446 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 SLC13A2Q13183 592 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 RUNX2Q13950 521 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 TGFBIQ15582 683 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 ZNF630Q2M218 657 aaPredicted RBP13.21□□□□□ -0.29
LINC01006-202ENST00000418309 FBXO48Q5FWF7 155 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 GPSM1Q86YR5 675 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 KLHDC8AQ8IYD2 350 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 GHDCQ8N2G8 530 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 TCAIMQ8N3R3 496 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 TMEM156Q8N614 296 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 CPSF7Q8N684 471 aaKnown RBP13.21□□□□□ -0.29
LINC01006-202ENST00000418309 SNX31Q8N9S9 440 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 NFAM1Q8NET5 270 aaPredicted RBP13.21□□□□□ -0.29
LINC01006-202ENST00000418309 B3GNT7Q8NFL0 401 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 CDKL2Q92772 493 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 MS4A6EQ96DS6 147 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 TSPAN17Q96FV3 270 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 PDLIM2Q96JY6 352 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 NPLQ9BXD5 320 aaPredicted RBP13.21□□□□□ -0.29
LINC01006-202ENST00000418309 DERL2Q9GZP9 239 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 DPH5Q9H2P9 285 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 CNOT10Q9H9A5 744 aaKnown RBP13.21□□□□□ -0.29
LINC01006-202ENST00000418309 POPDC3Q9HBV1 291 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 SAYSD1Q9NPB0 183 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 SMYD2Q9NRG4 433 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 DNAJC11Q9NVH1 559 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 RNF14Q9UBS8 474 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 ZNF835Q9Y2P0 537 aa13.21□□□□□ -0.29
LINC01006-202ENST00000418309 LRIT2A6NDA9 550 aa13.2□□□□□ -0.3
LINC01006-202ENST00000418309 KLRC4-KLRK1H3BQV0 150 aa13.2□□□□□ -0.3
LINC01006-202ENST00000418309 PHGDHO43175 533 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms