RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 MEOX1P50221 254 aa13.48□□□□□ -0.25
PAF1-202ENST00000416728 CLCN2P51788 898 aa13.48□□□□□ -0.25
PAF1-202ENST00000416728 ARL4CP56559 192 aa13.48□□□□□ -0.25
PAF1-202ENST00000416728 BTN3A2P78410 334 aa13.48□□□□□ -0.25
PAF1-202ENST00000416728 MGAT5Q09328 741 aa13.48□□□□□ -0.25
PAF1-202ENST00000416728 FRG1Q14331 258 aaKnown RBP13.48□□□□□ -0.25
PAF1-202ENST00000416728 ZNF460Q14592 562 aa13.48□□□□□ -0.25
PAF1-202ENST00000416728 TERF2Q15554 542 aa13.48□□□□□ -0.25
PAF1-202ENST00000416728 C3P1Q6ZMU1 363 aa13.48□□□□□ -0.25
PAF1-202ENST00000416728 FRA10AC1Q70Z53 315 aa13.48□□□□□ -0.25
PAF1-202ENST00000416728 ADAMTSL2Q86TH1 951 aa13.48□□□□□ -0.25
PAF1-202ENST00000416728 ZC3HC1Q86WB0 502 aaKnown RBP13.48□□□□□ -0.25
PAF1-202ENST00000416728 CHERPQ8IWX8 916 aaKnown RBP13.48□□□□□ -0.25
PAF1-202ENST00000416728 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.48□□□□□ -0.25
PAF1-202ENST00000416728 TMEM156Q8N614 296 aa13.48□□□□□ -0.25
PAF1-202ENST00000416728 APCDD1LQ8NCL9 501 aa13.48□□□□□ -0.25
PAF1-202ENST00000416728 B3GNT7Q8NFL0 401 aa13.48□□□□□ -0.25
PAF1-202ENST00000416728 TTLQ8NG68 377 aa13.48□□□□□ -0.25
PAF1-202ENST00000416728 PHF10Q8WUB8 498 aaKnown RBP13.48□□□□□ -0.25
PAF1-202ENST00000416728 GAL3ST3Q96A11 431 aa13.48□□□□□ -0.25
PAF1-202ENST00000416728 PDLIM2Q96JY6 352 aa13.48□□□□□ -0.25
PAF1-202ENST00000416728 VKORC1Q9BQB6 163 aa13.48□□□□□ -0.25
PAF1-202ENST00000416728 FBXW2Q9UKT8 454 aa13.48□□□□□ -0.25
PAF1-202ENST00000416728 PPT2Q9UMR5 302 aa13.48□□□□□ -0.25
PAF1-202ENST00000416728 OARD1Q9Y530 152 aa13.48□□□□□ -0.25
PAF1-202ENST00000416728 KLRC4-KLRK1H3BQV0 150 aa13.47□□□□□ -0.25
PAF1-202ENST00000416728 H2AFYO75367 372 aaKnown RBP13.47□□□□□ -0.25
PAF1-202ENST00000416728 WDR47O94967 919 aa13.47□□□□□ -0.25
PAF1-202ENST00000416728 C1GALT1C1LP0DN25 315 aa13.47□□□□□ -0.25
PAF1-202ENST00000416728 POU3F2P20265 443 aaPredicted RBP13.47□□□□□ -0.25
PAF1-202ENST00000416728 SSTR2P30874 369 aa13.47□□□□□ -0.25
PAF1-202ENST00000416728 PTGER1P34995 402 aa13.47□□□□□ -0.25
PAF1-202ENST00000416728 TAS2R39P59534 338 aa13.47□□□□□ -0.25
PAF1-202ENST00000416728 TMIGD1Q6UXZ0 262 aa13.47□□□□□ -0.25
PAF1-202ENST00000416728 ANKMY2Q8IV38 441 aa13.47□□□□□ -0.25
PAF1-202ENST00000416728 SULF2Q8IWU5 870 aa13.47□□□□□ -0.25
PAF1-202ENST00000416728 KLHL7Q8IXQ5 586 aa13.47□□□□□ -0.25
PAF1-202ENST00000416728 ZNF295-AS1Q8N0V1 137 aa13.47□□□□□ -0.25
PAF1-202ENST00000416728 CYP4Z2PQ8N1L4 340 aa13.47□□□□□ -0.25
PAF1-202ENST00000416728 CCT6BQ92526 530 aa13.47□□□□□ -0.25
PAF1-202ENST00000416728 VPS39Q96JC1 886 aa13.47□□□□□ -0.25
PAF1-202ENST00000416728 RUNDC3BQ96NL0 473 aa13.47□□□□□ -0.25
PAF1-202ENST00000416728 DMRTA2Q96SC8 542 aa13.47□□□□□ -0.25
PAF1-202ENST00000416728 AICDAQ9GZX7 198 aa13.47□□□□□ -0.25
PAF1-202ENST00000416728 PNO1Q9NRX1 252 aaKnown RBP13.47□□□□□ -0.25
PAF1-202ENST00000416728 CTNNAL1Q9UBT7 734 aa13.47□□□□□ -0.25
PAF1-202ENST00000416728 ASB1Q9Y576 335 aa13.47□□□□□ -0.25
PAF1-202ENST00000416728 PKDREJQ9NTG1 2253 aa13.46□□□□□ -0.25
PAF1-202ENST00000416728 A0A088AWK7 358 aa13.46□□□□□ -0.25
PAF1-202ENST00000416728 A0A0G2JN53 185 aa13.46□□□□□ -0.25
PAF1-202ENST00000416728 CLDN4O14493 209 aa13.46□□□□□ -0.25
PAF1-202ENST00000416728 ADAM10O14672 748 aa13.46□□□□□ -0.25
PAF1-202ENST00000416728 ERI3O43414 337 aaKnown RBP13.46□□□□□ -0.25
PAF1-202ENST00000416728 PEX1O43933 1283 aa13.46□□□□□ -0.25
PAF1-202ENST00000416728 ITGA10O75578 1167 aa13.46□□□□□ -0.25
PAF1-202ENST00000416728 ZNF10P21506 573 aaPredicted RBP13.46□□□□□ -0.25
PAF1-202ENST00000416728 GSTM2P28161 218 aa13.46□□□□□ -0.25
PAF1-202ENST00000416728 PTGS2P35354 604 aa13.46□□□□□ -0.25
PAF1-202ENST00000416728 RFC3P40938 356 aa13.46□□□□□ -0.25
PAF1-202ENST00000416728 GDF5P43026 501 aa13.46□□□□□ -0.25
PAF1-202ENST00000416728 KIR3DL1P43629 444 aa13.46□□□□□ -0.25
PAF1-202ENST00000416728 HSD17B7P56937 341 aa13.46□□□□□ -0.25
PAF1-202ENST00000416728 DR1Q01658 176 aa13.46□□□□□ -0.25
PAF1-202ENST00000416728 SLC13A2Q13183 592 aa13.46□□□□□ -0.25
PAF1-202ENST00000416728 SLBPQ14493 270 aaKnown RBP eCLIP13.46□□□□□ -0.25
PAF1-202ENST00000416728 TSNQ15631 228 aaKnown RBP13.46□□□□□ -0.25
PAF1-202ENST00000416728 SLCO4C1Q6ZQN7 724 aa13.46□□□□□ -0.25
PAF1-202ENST00000416728 FGD2Q7Z6J4 655 aa13.46□□□□□ -0.25
PAF1-202ENST00000416728 CEP97Q8IW35 865 aa13.46□□□□□ -0.25
PAF1-202ENST00000416728 SCUBE1Q8IWY4 988 aa13.46□□□□□ -0.25
PAF1-202ENST00000416728 CA5BP1Q8WTZ4 195 aa13.46□□□□□ -0.25
PAF1-202ENST00000416728 SDCCAG3Q96C92 435 aa13.46□□□□□ -0.25
PAF1-202ENST00000416728 MS4A6EQ96DS6 147 aa13.46□□□□□ -0.25
PAF1-202ENST00000416728 VMP1Q96GC9 406 aa13.46□□□□□ -0.25
PAF1-202ENST00000416728 CCDC77Q9BR77 488 aa13.46□□□□□ -0.25
PAF1-202ENST00000416728 NPLQ9BXD5 320 aaPredicted RBP13.46□□□□□ -0.25
PAF1-202ENST00000416728 PRTFDC1Q9NRG1 225 aa13.46□□□□□ -0.25
PAF1-202ENST00000416728 COQ3Q9NZJ6 369 aa13.46□□□□□ -0.25
PAF1-202ENST00000416728 MRPS33Q9Y291 106 aaKnown RBP13.46□□□□□ -0.25
PAF1-202ENST00000416728 APCP25054 2843 aa13.46□□□□□ -0.25
PAF1-202ENST00000416728 FBN2P35556 2912 aa13.46□□□□□ -0.26
PAF1-202ENST00000416728 A0A1B0GTH9 108 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 LRIT2A6NDA9 550 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 B3GALT2O43825 422 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 HS6ST1O60243 411 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 CDC40O60508 579 aaKnown RBP eCLIP13.45□□□□□ -0.26
PAF1-202ENST00000416728 TPOP07202 933 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 HNRNPH1P31943 449 aaKnown RBP13.45□□□□□ -0.26
PAF1-202ENST00000416728 HPDP32754 393 aaPredicted RBP13.45□□□□□ -0.26
PAF1-202ENST00000416728 SLC6A12P48065 614 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 SLC12A2P55011 1212 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 RAB38P57729 211 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 PDIA2Q13087 525 aaKnown RBP13.45□□□□□ -0.26
PAF1-202ENST00000416728 RUNX2Q13950 521 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 C18orf21Q32NC0 220 aaPredicted RBP13.45□□□□□ -0.26
PAF1-202ENST00000416728 CD163Q86VB7 1156 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 KLHDC8AQ8IYD2 350 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 KRT78Q8N1N4 520 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 FBXO36Q8NEA4 188 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 C16orf52Q8NHV5 167 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms