RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 ZNF436Q9C0F3 470 aaPredicted RBP7.55□□□□□ -1.2
SIK3-203ENST00000415541 RC3H2Q9HBD1 1191 aaKnown RBP7.55□□□□□ -1.2
SIK3-203ENST00000415541 CRLS1Q9UJA2 301 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 FAM50BQ9Y247 325 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 NUP205Q92621 2012 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 TARM1B6A8C7 271 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 ACSM4P0C7M7 580 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 OR56A5P0C7T3 313 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 ZNF806P0C7X5 589 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 NMBRP28336 390 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 POLR2JP52435 117 aaKnown RBP7.55□□□□□ -1.2
SIK3-203ENST00000415541 RPP38P78345 283 aaKnown RBP7.55□□□□□ -1.2
SIK3-203ENST00000415541 CAP1Q01518 475 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 DMC1Q14565 340 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 MS4A13Q5J8X5 152 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 KIAA1614Q5VZ46 1190 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 FBXO46Q6PJ61 603 aaPredicted RBP7.55□□□□□ -1.2
SIK3-203ENST00000415541 ZNF367Q7RTV3 350 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 LIMS2Q7Z4I7 341 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 HS3ST5Q8IZT8 346 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 SMG7Q92540 1137 aaKnown RBP7.55□□□□□ -1.2
SIK3-203ENST00000415541 CASD1Q96PB1 797 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 SORCS2Q96PQ0 1159 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 RTP3Q9BQQ7 232 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 TRIM8Q9BZR9 551 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 OSBPL2Q9H1P3 480 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 EMC7Q9NPA0 242 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 AGO1Q9UL18 857 aaKnown RBP7.55□□□□□ -1.2
SIK3-203ENST00000415541 ASB4Q9Y574 426 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 LCTP09848 1927 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 RAB19A4D1S5 217 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 GRXCR2A6NFK2 248 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 M0R082 166 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 M0R233 179 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 KPNA3O00505 521 aaPredicted RBP7.54□□□□□ -1.2
SIK3-203ENST00000415541 AZIN1O14977 448 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 SGCEO43556 437 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 IFNA4P05014 189 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 HLA-DQB2P05538 268 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 ALDOCP09972 364 aaKnown RBP7.54□□□□□ -1.2
SIK3-203ENST00000415541 STOMP27105 288 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 GPC1P35052 558 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 ZNF91Q05481 1191 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 PPIGQ13427 754 aaKnown RBP eCLIP7.54□□□□□ -1.22e-7■■□□□ 12.2
SIK3-203ENST00000415541 GTF2H3Q13889 308 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 INO80DQ53TQ3 878 aaPredicted RBP7.54□□□□□ -1.2
SIK3-203ENST00000415541 LRRC66Q68CR7 880 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 GDPGP1Q6ZNW5 385 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 USP45Q70EL2 814 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 OVCH2Q7RTZ1 564 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 TMPRSS9Q7Z410 1059 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 HS6ST3Q8IZP7 471 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 TMEM151AQ8N4L1 468 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 AP3S1Q92572 193 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 BADQ92934 168 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 TMEM175Q9BSA9 504 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 MAGIXQ9H6Y5 334 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 ELAC1Q9H777 363 aaKnown RBP7.54□□□□□ -1.2
SIK3-203ENST00000415541 C8orf33Q9H7E9 229 aaPredicted RBP7.54□□□□□ -1.2
SIK3-203ENST00000415541 NT5DC2Q9H857 520 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 GORASP2Q9H8Y8 452 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 RNF112Q9ULX5 631 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 CLCA3PQ9Y6N3 262 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 A0A0A6YYJ9 748 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 A8MT66 165 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 MYO1GB0I1T2 1018 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 SUPT3HB4E1H0 165 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 C9JVG2 144 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 WWP2O00308 870 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 EFCAB14O75071 495 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 CLDN11O75508 207 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 SLC2A2P11168 524 aaPredicted RBP7.54□□□□□ -1.2
SIK3-203ENST00000415541 SLC2A4P14672 509 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 CHMP24386 653 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 NRIP1P48552 1158 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 ATP12AP54707 1039 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 LARS2Q15031 903 aaKnown RBP7.54□□□□□ -1.2
SIK3-203ENST00000415541 PAFAH1B3Q15102 231 aaKnown RBP7.54□□□□□ -1.2
SIK3-203ENST00000415541 MICAQ29983 383 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 TUSC1Q2TAM9 212 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 ZMAT1Q5H9K5 638 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 DDI2Q5TDH0 399 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 SAXO2Q658L1 398 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 BEND4Q6ZU67 534 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 ZNF605Q86T29 641 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 ZSWIM9Q86XI8 627 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 DTWD1Q8N5C7 304 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 HEXDCQ8WVB3 486 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 LINC01599Q8WXQ3 324 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 NXPE2Q96DL1 559 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 LINC00052Q96N35 136 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 MCCC1Q96RQ3 725 aaPredicted RBP7.54□□□□□ -1.2
SIK3-203ENST00000415541 CNPPD1Q9BV87 410 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 IL1RAPQ9NPH3 570 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 SPASTQ9UBP0 616 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 NDRG3Q9UGV2 375 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 TTC3P53804 2025 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 A0A0D9SEW6 157 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 CCDC85CA6NKD9 419 aa7.54□□□□□ -1.2
SIK3-203ENST00000415541 NEDD8-MDP1E9PL57 170 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms