RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 OR2L2Q8NH16 312 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 OSTF1Q92882 214 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 UFD1Q92890 307 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 COPS4Q9BT78 406 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 NTMT1Q9BV86 223 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 RAB6CQ9H0N0 254 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 RASSF1Q9NS23 344 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 SSC5DA1L4H1 1573 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 FAM149AA5PLN7 773 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 DNAJB5O75953 348 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 OR5F1O95221 314 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 TIMP2P16035 220 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 ITIH1P19827 911 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 INHBCP55103 352 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 AP3S2P59780 193 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 SERTAD2Q14140 314 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 CYBRD1Q53TN4 286 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 CATSPEREQ5SY80 951 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 OR4C11Q6IEV9 310 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 IZUMO1Q8IYV9 350 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 OR4K17Q8NGC6 315 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.51□□□□□ -0.57
PTPRF-205ENST00000414879 GTPBP3Q969Y2 492 aaKnown RBP11.51□□□□□ -0.57
PTPRF-205ENST00000414879 RHBDF1Q96CC6 855 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 ASPNQ9BXN1 380 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 TRIM2Q9C040 744 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 RNF38Q9H0F5 515 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 STOX2Q9P2F5 926 aaPredicted RBP11.51□□□□□ -0.57
PTPRF-205ENST00000414879 LINC01553A4QN01 128 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 RPS17P08708 135 aaKnown RBP11.51□□□□□ -0.57
PTPRF-205ENST00000414879 GPR68Q15743 365 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 VMACQ2NL98 169 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 PRPF38BQ5VTL8 546 aaKnown RBP11.51□□□□□ -0.57
PTPRF-205ENST00000414879 LIN54Q6MZP7 749 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 NANOGP8Q6NSW7 305 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 TMEM156Q8N614 296 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 OR2AJ1Q8NGZ0 328 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 NFKBIDQ8NI38 313 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 SORCS1Q8WY21 1168 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 DUSP23Q9BVJ7 150 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 NANOGQ9H9S0 305 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 ZNF334Q9HCZ1 680 aaPredicted RBP11.51□□□□□ -0.57
PTPRF-205ENST00000414879 SEC14L4Q9UDX3 406 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 ZNF726A6NNF4 738 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 SCAMP1O15126 338 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 AHSA1O95433 338 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 NADKO95544 446 aaPredicted RBP11.51□□□□□ -0.57
PTPRF-205ENST00000414879 HEXBP07686 556 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 RAB15P59190 212 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 BLMHQ13867 455 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 OR4D1Q15615 310 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 TBC1D25Q3MII6 688 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 C6orf52Q5T4I8 152 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 ANKRD54Q6NXT1 300 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 SLC30A6Q6NXT4 461 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 TSPAN33Q86UF1 283 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 ZNF483Q8TF39 744 aaPredicted RBP11.51□□□□□ -0.57
PTPRF-205ENST00000414879 BMFQ96LC9 184 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 CD180Q99467 661 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 PCDHAC1Q9H158 963 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 RC3H2Q9HBD1 1191 aaKnown RBP11.51□□□□□ -0.57
PTPRF-205ENST00000414879 A0A0G2JN53 185 aa11.5□□□□□ -0.57
PTPRF-205ENST00000414879 H0YAE9 185 aa11.5□□□□□ -0.57
PTPRF-205ENST00000414879 YKT6O15498 198 aa11.5□□□□□ -0.57
PTPRF-205ENST00000414879 OXSR1O95747 527 aaPredicted RBP11.5□□□□□ -0.57
PTPRF-205ENST00000414879 JMJD7P0C870 316 aa11.5□□□□□ -0.57
PTPRF-205ENST00000414879 SLC6A6P31641 620 aa11.5□□□□□ -0.57
PTPRF-205ENST00000414879 PRLHRP49683 370 aa11.5□□□□□ -0.57
PTPRF-205ENST00000414879 KLHL36Q8N4N3 616 aa11.5□□□□□ -0.57
PTPRF-205ENST00000414879 HSH2DQ96JZ2 352 aa11.5□□□□□ -0.57
PTPRF-205ENST00000414879 KCNS3Q9BQ31 491 aa11.5□□□□□ -0.57
PTPRF-205ENST00000414879 HDAC8Q9BY41 377 aa11.5□□□□□ -0.57
PTPRF-205ENST00000414879 KLHL25Q9H0H3 589 aa11.5□□□□□ -0.57
PTPRF-205ENST00000414879 LMAN1LQ9HAT1 526 aa11.5□□□□□ -0.57
PTPRF-205ENST00000414879 PAK6Q9NQU5 681 aaPredicted RBP11.5□□□□□ -0.57
PTPRF-205ENST00000414879 HCFC1R1Q9NWW0 138 aa11.5□□□□□ -0.57
PTPRF-205ENST00000414879 GEMIN8Q9NWZ8 242 aaKnown RBP11.5□□□□□ -0.57
PTPRF-205ENST00000414879 CDK5RAP2Q96SN8 1893 aa11.5□□□□□ -0.57
PTPRF-205ENST00000414879 H3BNC9 293 aa11.5□□□□□ -0.57
PTPRF-205ENST00000414879 EI24O14681 340 aa11.5□□□□□ -0.57
PTPRF-205ENST00000414879 HOXC11O43248 304 aaPredicted RBP11.5□□□□□ -0.57
PTPRF-205ENST00000414879 PROM1O43490 865 aa11.5□□□□□ -0.57
PTPRF-205ENST00000414879 LINGO3P0C6S8 592 aa11.5□□□□□ -0.57
PTPRF-205ENST00000414879 HSD17B1P14061 328 aa11.5□□□□□ -0.57
PTPRF-205ENST00000414879 FBLP22087 321 aaKnown RBP11.5□□□□□ -0.57
PTPRF-205ENST00000414879 MNDAP41218 407 aa11.5□□□□□ -0.57
PTPRF-205ENST00000414879 GBX2P52951 348 aaPredicted RBP11.5□□□□□ -0.57
PTPRF-205ENST00000414879 PPP3R1P63098 170 aa11.5□□□□□ -0.57
PTPRF-205ENST00000414879 TUBA4AP68366 448 aa11.5□□□□□ -0.57
PTPRF-205ENST00000414879 ARF5P84085 180 aa11.5□□□□□ -0.57
PTPRF-205ENST00000414879 UAP1L1Q3KQV9 507 aa11.5□□□□□ -0.57
PTPRF-205ENST00000414879 PNCKQ6P2M8 343 aa11.5□□□□□ -0.57
PTPRF-205ENST00000414879 CDHR3Q6ZTQ4 885 aa11.5□□□□□ -0.57
PTPRF-205ENST00000414879 GPR149Q86SP6 731 aa11.5□□□□□ -0.57
PTPRF-205ENST00000414879 GNPDA2Q8TDQ7 276 aa11.5□□□□□ -0.57
PTPRF-205ENST00000414879 EZH1Q92800 747 aaPredicted RBP11.5□□□□□ -0.57
PTPRF-205ENST00000414879 TMBIM1Q969X1 311 aa11.5□□□□□ -0.57
PTPRF-205ENST00000414879 ZNF778Q96MU6 729 aa11.5□□□□□ -0.57
PTPRF-205ENST00000414879 KCNA7Q96RP8 456 aa11.5□□□□□ -0.57
PTPRF-205ENST00000414879 SMAD5Q99717 465 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms