RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 MAGEB10Q96LZ2 347 aaPredicted RBP16.63■□□□□ 0.25
LSM5-204ENST00000409909 PTCHD1Q96NR3 888 aa16.63■□□□□ 0.25
LSM5-204ENST00000409909 QRFPRQ96P65 431 aa16.63■□□□□ 0.25
LSM5-204ENST00000409909 NPAS2Q99743 824 aa16.63■□□□□ 0.25
LSM5-204ENST00000409909 CDC42EP4Q9H3Q1 356 aaKnown RBP16.63■□□□□ 0.25
LSM5-204ENST00000409909 SVILO95425 2214 aa16.63■□□□□ 0.25
LSM5-204ENST00000409909 A0A087X1B8 175 aa16.62■□□□□ 0.25
LSM5-204ENST00000409909 IGKV3D-11A0A0A0MRZ8 115 aa16.62■□□□□ 0.25
LSM5-204ENST00000409909 ANKDD1BA6NHY2 528 aa16.62■□□□□ 0.25
LSM5-204ENST00000409909 ERI3O43414 337 aaKnown RBP16.62■□□□□ 0.25
LSM5-204ENST00000409909 ACSL3O95573 720 aa16.62■□□□□ 0.25
LSM5-204ENST00000409909 UQCRHP07919 91 aa16.62■□□□□ 0.25
LSM5-204ENST00000409909 GSTM2P28161 218 aa16.62■□□□□ 0.25
LSM5-204ENST00000409909 PHBP35232 272 aa16.62■□□□□ 0.25
LSM5-204ENST00000409909 CASP2P42575 452 aa16.62■□□□□ 0.25
LSM5-204ENST00000409909 IRF8Q02556 426 aa16.62■□□□□ 0.25
LSM5-204ENST00000409909 CHIT1Q13231 466 aa16.62■□□□□ 0.25
LSM5-204ENST00000409909 E2F2Q14209 437 aa16.62■□□□□ 0.25
LSM5-204ENST00000409909 TBCCQ15814 346 aa16.62■□□□□ 0.25
LSM5-204ENST00000409909 EXT1Q16394 746 aa16.62■□□□□ 0.25
LSM5-204ENST00000409909 GLE1Q53GS7 698 aaKnown RBP16.62■□□□□ 0.25
LSM5-204ENST00000409909 ABHD17BQ5VST6 288 aa16.62■□□□□ 0.25
LSM5-204ENST00000409909 RPUSD3Q6P087 351 aaKnown RBP16.62■□□□□ 0.25
LSM5-204ENST00000409909 QSOX2Q6ZRP7 698 aa16.62■□□□□ 0.25
LSM5-204ENST00000409909 LRRC70Q7Z2Q7 622 aa16.62■□□□□ 0.25
LSM5-204ENST00000409909 RHEBL1Q8TAI7 183 aa16.62■□□□□ 0.25
LSM5-204ENST00000409909 UBTD2Q8WUN7 234 aa16.62■□□□□ 0.25
LSM5-204ENST00000409909 FAR2Q96K12 515 aa16.62■□□□□ 0.25
LSM5-204ENST00000409909 GPR78Q96P69 363 aa16.62■□□□□ 0.25
LSM5-204ENST00000409909 PSMG3-AS1Q96PY0 264 aa16.62■□□□□ 0.25
LSM5-204ENST00000409909 LPAR4Q99677 370 aa16.62■□□□□ 0.25
LSM5-204ENST00000409909 EFCAB11Q9BUY7 163 aa16.62■□□□□ 0.25
LSM5-204ENST00000409909 RNF32Q9H0A6 362 aa16.62■□□□□ 0.25
LSM5-204ENST00000409909 KCNK13Q9HB14 408 aa16.62■□□□□ 0.25
LSM5-204ENST00000409909 MMP25Q9NPA2 562 aa16.62■□□□□ 0.25
LSM5-204ENST00000409909 NECTIN3Q9NQS3 549 aa16.62■□□□□ 0.25
LSM5-204ENST00000409909 ICE1Q9Y2F5 2266 aa16.61■□□□□ 0.25
LSM5-204ENST00000409909 A0A096LPK6 155 aa16.61■□□□□ 0.25
LSM5-204ENST00000409909 TRAV17A0A0B4J275 112 aa16.61■□□□□ 0.25
LSM5-204ENST00000409909 TCRBV16S1A1N1A0A5B0 115 aa16.61■□□□□ 0.25
LSM5-204ENST00000409909 ANKUB1A6NFN9 424 aa16.61■□□□□ 0.25
LSM5-204ENST00000409909 MAN1A2O60476 641 aa16.61■□□□□ 0.25
LSM5-204ENST00000409909 AGFG2O95081 481 aa16.61■□□□□ 0.25
LSM5-204ENST00000409909 TUBB4AP04350 444 aa16.61■□□□□ 0.25
LSM5-204ENST00000409909 RNF224P0DH78 156 aa16.61■□□□□ 0.25
LSM5-204ENST00000409909 PLA2G16P53816 162 aa16.61■□□□□ 0.25
LSM5-204ENST00000409909 SLC26A5P58743 744 aa16.61■□□□□ 0.25
LSM5-204ENST00000409909 FAM83EQ2M2I3 478 aa16.61■□□□□ 0.25
LSM5-204ENST00000409909 ACER2Q5QJU3 275 aa16.61■□□□□ 0.25
LSM5-204ENST00000409909 CEP128Q6ZU80 1094 aa16.61■□□□□ 0.25
LSM5-204ENST00000409909 CCDC91Q7Z6B0 441 aa16.61■□□□□ 0.25
LSM5-204ENST00000409909 OR2L5Q8NG80 312 aa16.61■□□□□ 0.25
LSM5-204ENST00000409909 FAR1Q8WVX9 515 aa16.61■□□□□ 0.25
LSM5-204ENST00000409909 SLC44A1Q8WWI5 657 aa16.61■□□□□ 0.25
LSM5-204ENST00000409909 F2RL3Q96RI0 385 aa16.61■□□□□ 0.25
LSM5-204ENST00000409909 TAAR6Q96RI8 345 aa16.61■□□□□ 0.25
LSM5-204ENST00000409909 FMO2Q99518 471 aa16.61■□□□□ 0.25
LSM5-204ENST00000409909 REXO4Q9GZR2 422 aaKnown RBP16.61■□□□□ 0.25
LSM5-204ENST00000409909 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.61■□□□□ 0.25
LSM5-204ENST00000409909 PRDM9Q9NQV7 894 aa16.61■□□□□ 0.25
LSM5-204ENST00000409909 AGPAT4Q9NRZ5 378 aa16.61■□□□□ 0.25
LSM5-204ENST00000409909 BLACEA4D250 179 aa16.6■□□□□ 0.25
LSM5-204ENST00000409909 OR5H15A6NDH6 313 aa16.6■□□□□ 0.25
LSM5-204ENST00000409909 K7EPI3 171 aa16.6■□□□□ 0.25
LSM5-204ENST00000409909 PSMD12O00232 456 aaPredicted RBP16.6■□□□□ 0.25
LSM5-204ENST00000409909 E2F3O00716 465 aa16.6■□□□□ 0.25
LSM5-204ENST00000409909 KLHL2O95198 593 aa16.6■□□□□ 0.25
LSM5-204ENST00000409909 TYK2P29597 1187 aa16.6■□□□□ 0.25
LSM5-204ENST00000409909 ST13P50502 369 aaKnown RBP16.6■□□□□ 0.25
LSM5-204ENST00000409909 HNRNPFP52597 415 aaKnown RBP16.6■□□□□ 0.25
LSM5-204ENST00000409909 PCDH1Q08174 1060 aa16.6■□□□□ 0.25
LSM5-204ENST00000409909 LAPTM5Q13571 262 aa16.6■□□□□ 0.25
LSM5-204ENST00000409909 ACAP2Q15057 778 aa16.6■□□□□ 0.25
LSM5-204ENST00000409909 ABHD17CQ6PCB6 329 aa16.6■□□□□ 0.25
LSM5-204ENST00000409909 UBE3DQ7Z6J8 389 aa16.6■□□□□ 0.25
LSM5-204ENST00000409909 CRLF3Q8IUI8 442 aa16.6■□□□□ 0.25
LSM5-204ENST00000409909 CYP4X1Q8N118 509 aa16.6■□□□□ 0.25
LSM5-204ENST00000409909 BEST3Q8N1M1 668 aa16.6■□□□□ 0.25
LSM5-204ENST00000409909 PLD6Q8N2A8 252 aaKnown RBP16.6■□□□□ 0.25
LSM5-204ENST00000409909 KIF2BQ8N4N8 673 aa16.6■□□□□ 0.25
LSM5-204ENST00000409909 TMEM52Q8NDY8 209 aa16.6■□□□□ 0.25
LSM5-204ENST00000409909 ELP5Q8TE02 316 aa16.6■□□□□ 0.25
LSM5-204ENST00000409909 ZNF354BQ96LW1 612 aa16.6■□□□□ 0.25
LSM5-204ENST00000409909 NPLQ9BXD5 320 aaPredicted RBP16.6■□□□□ 0.25
LSM5-204ENST00000409909 TSPYL1Q9H0U9 437 aa16.6■□□□□ 0.25
LSM5-204ENST00000409909 PRDM7Q9NQW5 492 aa16.6■□□□□ 0.25
LSM5-204ENST00000409909 OPTCQ9UBM4 332 aa16.6■□□□□ 0.25
LSM5-204ENST00000409909 TEKT2Q9UIF3 430 aa16.6■□□□□ 0.25
LSM5-204ENST00000409909 CLDN16Q9Y5I7 305 aa16.6■□□□□ 0.25
LSM5-204ENST00000409909 ZGRF1Q86YA3 2104 aa16.6■□□□□ 0.25
LSM5-204ENST00000409909 DOPEY1Q5JWR5 2465 aa16.59■□□□□ 0.25
LSM5-204ENST00000409909 LRRC14BA6NHZ5 514 aa16.59■□□□□ 0.25
LSM5-204ENST00000409909 SYCE1LA8MT33 242 aa16.59■□□□□ 0.25
LSM5-204ENST00000409909 TGFBR3LH3BV60 316 aa16.59■□□□□ 0.25
LSM5-204ENST00000409909 KIF2AO00139 706 aaPredicted RBP16.59■□□□□ 0.25
LSM5-204ENST00000409909 B3GALT2O43825 422 aa16.59■□□□□ 0.25
LSM5-204ENST00000409909 KLK8O60259 260 aa16.59■□□□□ 0.25
LSM5-204ENST00000409909 CERS1P27544 350 aa16.59■□□□□ 0.25
LSM5-204ENST00000409909 MSH2P43246 934 aa16.59■□□□□ 0.25
LSM5-204ENST00000409909 SERPINB8P50452 374 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms