RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 ARFIP1P53367 373 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 PLA2G16P53816 162 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 AP2B1P63010 937 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 CHAF1BQ13112 559 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 TRAF3Q13114 568 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 AIMP2Q13155 320 aaKnown RBP10.3□□□□□ -0.76
CHMP3-205ENST00000409810 ZRSR2Q15696 482 aaKnown RBP10.3□□□□□ -0.76
CHMP3-205ENST00000409810 LACTB2Q53H82 288 aaPredicted RBP10.3□□□□□ -0.76
CHMP3-205ENST00000409810 SOWAHCQ53LP3 525 aaPredicted RBP10.3□□□□□ -0.76
CHMP3-205ENST00000409810 IRAK1BP1Q5VVH5 260 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 CPZQ66K79 652 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 TTC19Q6DKK2 380 aaPredicted RBP10.3□□□□□ -0.76
CHMP3-205ENST00000409810 ABHD17CQ6PCB6 329 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 KIRREL2Q6UWL6 708 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 SRRM1Q8IYB3 904 aaKnown RBP10.3□□□□□ -0.76
CHMP3-205ENST00000409810 OR52B6Q8NGF0 335 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 HUS1BQ8NHY5 278 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 L3HYPDHQ96EM0 354 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 NSUN5Q96P11 429 aaKnown RBP10.3□□□□□ -0.76
CHMP3-205ENST00000409810 BBC3Q96PG8 261 aaPredicted RBP10.3□□□□□ -0.76
CHMP3-205ENST00000409810 TMEM237Q96Q45 408 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 ZNF382Q96SR6 550 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 TBCDQ9BTW9 1192 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 SLC25A23Q9BV35 468 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 VN1R1Q9GZP7 353 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 SLC25A18Q9H1K4 315 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 ELOVL6Q9H5J4 265 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 ZBTB26Q9HCK0 441 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 ATP13A2Q9NQ11 1180 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 DMRT3Q9NQL9 472 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 FBXL4Q9UKA2 621 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 PPT2Q9UMR5 302 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 MRPS33Q9Y291 106 aaKnown RBP10.3□□□□□ -0.76
CHMP3-205ENST00000409810 RNF11Q9Y3C5 154 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 PCDHGB7Q9Y5F8 929 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 PCDHGA9Q9Y5G4 932 aaKnown RBP10.3□□□□□ -0.76
CHMP3-205ENST00000409810 SPACA6W5XKT8 324 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 TNRC6AQ8NDV7 1962 aaKnown RBP10.3□□□□□ -0.76
CHMP3-205ENST00000409810 CNTRLQ7Z7A1 2325 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 H3BQF6 201 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 FOXE1O00358 373 aaPredicted RBP10.29□□□□□ -0.76
CHMP3-205ENST00000409810 PLIN3O60664 434 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 DNAJB5O75953 348 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 HPP00738 406 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 TGFB1P01137 390 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 MYZAPP0CAP1 466 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 PTX3P26022 381 aaPredicted RBP10.29□□□□□ -0.76
CHMP3-205ENST00000409810 CDH13P55290 713 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 RAB38P57729 211 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 SNRPNP63162 240 aaKnown RBP10.29□□□□□ -0.76
CHMP3-205ENST00000409810 OLR1P78380 273 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 EEF1A2Q05639 463 aaKnown RBP10.29□□□□□ -0.76
CHMP3-205ENST00000409810 ASPHQ12797 758 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 LCP2Q13094 533 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 AP5B1Q2VPB7 878 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 UNC50Q53HI1 259 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 CFAP157Q5JU67 520 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 KHDRBS2Q5VWX1 349 aaKnown RBP10.29□□□□□ -0.76
CHMP3-205ENST00000409810 FRG2Q64ET8 278 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 ADNP2Q6IQ32 1131 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 QSOX2Q6ZRP7 698 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 NDUFAF7Q7L592 441 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 LAPTM4BQ86VI4 370 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 CA13Q8N1Q1 262 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 EXD3Q8N9H8 876 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 ARMC2Q8NEN0 867 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 MYRIPQ8NFW9 859 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 OR4F6Q8NGB9 312 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 OR11G2Q8NGC1 345 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 OR5T3Q8NGG3 340 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 WDR20Q8TBZ3 569 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 TRPC4APQ8TEL6 797 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 SREK1Q8WXA9 508 aaKnown RBP10.29□□□□□ -0.76
CHMP3-205ENST00000409810 RGMAQ96B86 450 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 ABHD17AQ96GS6 310 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 CDK15Q96Q40 435 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 FRG2BQ96QU4 278 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 F2RL3Q96RI0 385 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 MTERF1Q99551 399 aaKnown RBP10.29□□□□□ -0.76
CHMP3-205ENST00000409810 SERPINI1Q99574 410 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 RBCK1Q9BYM8 510 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 TRIM55Q9BYV6 548 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 AICDAQ9GZX7 198 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 RIC8BQ9NVN3 520 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 PSD3Q9NYI0 1048 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 GPR83Q9NYM4 423 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 TRPS1Q9UHF7 1281 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 RALYQ9UKM9 306 aaKnown RBP10.29□□□□□ -0.76
CHMP3-205ENST00000409810 EMCNQ9ULC0 261 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 SNX6Q9UNH7 406 aa10.29□□□□□ -0.76
CHMP3-205ENST00000409810 SMG1Q96Q15 3661 aaKnown RBP10.28□□□□□ -0.76
CHMP3-205ENST00000409810 PCSK5Q92824 1860 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 TLN1Q9Y490 2541 aaKnown RBP10.28□□□□□ -0.76
CHMP3-205ENST00000409810 LOC102723996A0A087X1L8 192 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 NSG1A0A0A6YYJ2 146 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 A0A0G2JN53 185 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 A0A1W2PQ72 361 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 BLACEA4D250 179 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 MAGEB17A8MXT2 336 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 FOXO6A8MYZ6 492 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms