RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 PAMR1Q6UXH9 720 aa16.16■□□□□ 0.18
PCDHA13-202ENST00000409494 CHRDL2Q6WN34 429 aa16.16■□□□□ 0.18
PCDHA13-202ENST00000409494 KRT74Q7RTS7 529 aa16.16■□□□□ 0.18
PCDHA13-202ENST00000409494 LAPTM4BQ86VI4 370 aa16.16■□□□□ 0.18
PCDHA13-202ENST00000409494 MR1Q95460 341 aa16.16■□□□□ 0.18
PCDHA13-202ENST00000409494 MED31Q9Y3C7 131 aa16.16■□□□□ 0.18
PCDHA13-202ENST00000409494 PDLIM1O00151 329 aa16.16■□□□□ 0.18
PCDHA13-202ENST00000409494 YKT6O15498 198 aa16.16■□□□□ 0.18
PCDHA13-202ENST00000409494 NUAK1O60285 661 aa16.16■□□□□ 0.18
PCDHA13-202ENST00000409494 SERPINA3P01011 423 aa16.16■□□□□ 0.18
PCDHA13-202ENST00000409494 CD9P21926 228 aa16.16■□□□□ 0.18
PCDHA13-202ENST00000409494 CLDN8P56748 225 aa16.16■□□□□ 0.18
PCDHA13-202ENST00000409494 GRHL2Q6ISB3 625 aa16.16■□□□□ 0.18
PCDHA13-202ENST00000409494 LCTLQ6UWM7 567 aa16.16■□□□□ 0.18
PCDHA13-202ENST00000409494 P2RY8Q86VZ1 359 aa16.16■□□□□ 0.18
PCDHA13-202ENST00000409494 PYURFQ96I23 114 aa16.16■□□□□ 0.18
PCDHA13-202ENST00000409494 AIG1Q9NVV5 245 aa16.16■□□□□ 0.18
PCDHA13-202ENST00000409494 C17orf113A0A1B0GUU1 675 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 LINGO3P0C6S8 592 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 HOXD9P28356 352 aaPredicted RBP16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 FAUP35544 74 aaKnown RBP16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 NPTX1Q15818 432 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 SGCBQ16585 318 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 CTC1Q2NKJ3 1217 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 CATSPEREQ5SY80 951 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 FIGLAQ6QHK4 219 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 TSPAN33Q86UF1 283 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 IZUMO1Q8IYV9 350 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 OR2AJ1Q8NGZ0 328 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 TCEAL4Q96EI5 215 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 C1GALT1C1Q96EU7 318 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 RREB1Q92766 1687 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 NPIPB15A6NHN6 443 aaPredicted RBP16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 CREG1O75629 220 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 PLGLB1Q02325 96 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 SERTAD2Q14140 314 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 SLC30A6Q6NXT4 461 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 PDZD3Q86UT5 571 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 ARFGAP1Q8N6T3 406 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 OR9I1Q8NGQ6 314 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 RDH12Q96NR8 316 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 ASPNQ9BXN1 380 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 KLRF1Q9NZS2 232 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 SDHDO14521 159 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 NOBOXO60393 691 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 C9P02748 559 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 BCHEP06276 602 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 TIMP2P16035 220 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 NR4A1P22736 598 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 XKP51811 444 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 CDKL1Q00532 357 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 FAM189A2Q15884 450 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 LHX8Q68G74 356 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 KLHL17Q6TDP4 642 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 TDHQ8IZJ6 230 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 ARMC5Q96C12 935 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 PRR11Q96HE9 360 aaPredicted RBP16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 PTCHD1Q96NR3 888 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 BRF2Q9HAW0 419 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 NLGN3Q9NZ94 848 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 OR6C2Q9NZP2 312 aa16.15■□□□□ 0.18
PCDHA13-202ENST00000409494 H3BSA7 217 aa16.14■□□□□ 0.18
PCDHA13-202ENST00000409494 TNFRSF10BO14763 440 aa16.14■□□□□ 0.18
PCDHA13-202ENST00000409494 RPS15P62841 145 aaKnown RBP16.14■□□□□ 0.18
PCDHA13-202ENST00000409494 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.14■□□□□ 0.18
PCDHA13-202ENST00000409494 OR52E4Q8NGH9 312 aa16.14■□□□□ 0.18
PCDHA13-202ENST00000409494 FCRL4Q96PJ5 515 aa16.14■□□□□ 0.18
PCDHA13-202ENST00000409494 METTL7AQ9H8H3 244 aa16.14■□□□□ 0.18
PCDHA13-202ENST00000409494 ELL3Q9HB65 397 aaPredicted RBP16.14■□□□□ 0.18
PCDHA13-202ENST00000409494 TRNAU1APQ9NX07 287 aaKnown RBP16.14■□□□□ 0.18
PCDHA13-202ENST00000409494 PLAGL1Q9UM63 463 aa16.14■□□□□ 0.18
PCDHA13-202ENST00000409494 SPO11Q9Y5K1 396 aa16.14■□□□□ 0.18
PCDHA13-202ENST00000409494 OR5F1O95221 314 aa16.14■□□□□ 0.17
PCDHA13-202ENST00000409494 CD6P30203 668 aa16.14■□□□□ 0.17
PCDHA13-202ENST00000409494 ZNF140P52738 457 aaPredicted RBP16.14■□□□□ 0.17
PCDHA13-202ENST00000409494 CDKN2DP55273 166 aa16.14■□□□□ 0.17
PCDHA13-202ENST00000409494 IL18R1Q13478 541 aa16.14■□□□□ 0.17
PCDHA13-202ENST00000409494 LYSMD4Q5XG99 296 aa16.14■□□□□ 0.17
PCDHA13-202ENST00000409494 ERMP1Q7Z2K6 904 aa16.14■□□□□ 0.17
PCDHA13-202ENST00000409494 SYVN1Q86TM6 617 aa16.14■□□□□ 0.17
PCDHA13-202ENST00000409494 TEX26Q8N6G2 289 aa16.14■□□□□ 0.17
PCDHA13-202ENST00000409494 PDLIM5Q96HC4 596 aaKnown RBP16.14■□□□□ 0.17
PCDHA13-202ENST00000409494 XKR8Q9H6D3 395 aa16.14■□□□□ 0.17
PCDHA13-202ENST00000409494 HIDE1A8MVS5 230 aa16.14■□□□□ 0.17
PCDHA13-202ENST00000409494 BTN3A3O00478 584 aa16.14■□□□□ 0.17
PCDHA13-202ENST00000409494 CYB5AP00167 134 aa16.14■□□□□ 0.17
PCDHA13-202ENST00000409494 FGF4P08620 206 aa16.14■□□□□ 0.17
PCDHA13-202ENST00000409494 EFNA1P20827 205 aaPredicted RBP16.14■□□□□ 0.17
PCDHA13-202ENST00000409494 SMSP52788 366 aa16.14■□□□□ 0.17
PCDHA13-202ENST00000409494 ISCA2Q86U28 154 aa16.14■□□□□ 0.17
PCDHA13-202ENST00000409494 CNTN4Q8IWV2 1026 aa16.14■□□□□ 0.17
PCDHA13-202ENST00000409494 LGI4Q8N135 537 aa16.14■□□□□ 0.17
PCDHA13-202ENST00000409494 ATP6V1C2Q8NEY4 427 aa16.14■□□□□ 0.17
PCDHA13-202ENST00000409494 ARRDC2Q8TBH0 407 aa16.14■□□□□ 0.17
PCDHA13-202ENST00000409494 PMEPA1Q969W9 287 aa16.14■□□□□ 0.17
PCDHA13-202ENST00000409494 SRPK3Q9UPE1 567 aa16.14■□□□□ 0.17
PCDHA13-202ENST00000409494 BMP8BP34820 402 aa16.14■□□□□ 0.17
PCDHA13-202ENST00000409494 AGTR2P50052 363 aa16.14■□□□□ 0.17
PCDHA13-202ENST00000409494 SRP54P61011 504 aaKnown RBP16.14■□□□□ 0.17
PCDHA13-202ENST00000409494 ZNF267Q14586 743 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms