RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 PCSK5Q92824 1860 aa19.2■□□□□ 0.66
PTCD3-202ENST00000409326 NBEAQ8NFP9 2946 aa19.19■□□□□ 0.66
PTCD3-202ENST00000409326 A0A0G2JN53 185 aa19.19■□□□□ 0.66
PTCD3-202ENST00000409326 H3BQF6 201 aa19.19■□□□□ 0.66
PTCD3-202ENST00000409326 BMP10O95393 424 aa19.19■□□□□ 0.66
PTCD3-202ENST00000409326 ESRRBO95718 433 aa19.19■□□□□ 0.66
PTCD3-202ENST00000409326 XCR1P46094 333 aa19.19■□□□□ 0.66
PTCD3-202ENST00000409326 NEK2P51955 445 aa19.19■□□□□ 0.66
PTCD3-202ENST00000409326 OLR1P78380 273 aa19.19■□□□□ 0.66
PTCD3-202ENST00000409326 DEPDC1Q5TB30 811 aa19.19■□□□□ 0.66
PTCD3-202ENST00000409326 SHISA5Q8N114 240 aa19.19■□□□□ 0.66
PTCD3-202ENST00000409326 CDYL2Q8N8U2 506 aa19.19■□□□□ 0.66
PTCD3-202ENST00000409326 TLCD1Q96CP7 247 aa19.19■□□□□ 0.66
PTCD3-202ENST00000409326 CRB3Q9BUF7 120 aa19.19■□□□□ 0.66
PTCD3-202ENST00000409326 GATA5Q9BWX5 397 aaPredicted RBP19.19■□□□□ 0.66
PTCD3-202ENST00000409326 SLC29A3Q9BZD2 475 aa19.19■□□□□ 0.66
PTCD3-202ENST00000409326 OR51B5Q9H339 312 aa19.19■□□□□ 0.66
PTCD3-202ENST00000409326 SEMA3GQ9NS98 782 aa19.19■□□□□ 0.66
PTCD3-202ENST00000409326 SNX6Q9UNH7 406 aa19.19■□□□□ 0.66
PTCD3-202ENST00000409326 MED13Q9UHV7 2174 aa19.19■□□□□ 0.66
PTCD3-202ENST00000409326 ATMQ13315 3056 aa19.18■□□□□ 0.66
PTCD3-202ENST00000409326 UBFD1O14562 309 aaKnown RBP19.18■□□□□ 0.66
PTCD3-202ENST00000409326 CHST10O43529 356 aa19.18■□□□□ 0.66
PTCD3-202ENST00000409326 SH3BGRLO75368 114 aa19.18■□□□□ 0.66
PTCD3-202ENST00000409326 ZWINTO95229 277 aa19.18■□□□□ 0.66
PTCD3-202ENST00000409326 IGHEP01854 428 aa19.18■□□□□ 0.66
PTCD3-202ENST00000409326 ITGB2P05107 769 aa19.18■□□□□ 0.66
PTCD3-202ENST00000409326 ENO1P06733 434 aaKnown RBP19.18■□□□□ 0.66
PTCD3-202ENST00000409326 IL10P22301 178 aa19.18■□□□□ 0.66
PTCD3-202ENST00000409326 MMP11P24347 488 aa19.18■□□□□ 0.66
PTCD3-202ENST00000409326 PTX3P26022 381 aaPredicted RBP19.18■□□□□ 0.66
PTCD3-202ENST00000409326 OTX2P32243 289 aa19.18■□□□□ 0.66
PTCD3-202ENST00000409326 ARFIP1P53367 373 aa19.18■□□□□ 0.66
PTCD3-202ENST00000409326 MTTPP55157 894 aa19.18■□□□□ 0.66
PTCD3-202ENST00000409326 CUL3Q13618 768 aa19.18■□□□□ 0.66
PTCD3-202ENST00000409326 UBE3DQ7Z6J8 389 aa19.18■□□□□ 0.66
PTCD3-202ENST00000409326 LAPTM4BQ86VI4 370 aa19.18■□□□□ 0.66
PTCD3-202ENST00000409326 PRSS58Q8IYP2 241 aa19.18■□□□□ 0.66
PTCD3-202ENST00000409326 NACC2Q96BF6 587 aa19.18■□□□□ 0.66
PTCD3-202ENST00000409326 MTFMTQ96DP5 389 aaKnown RBP19.18■□□□□ 0.66
PTCD3-202ENST00000409326 PEX11GQ96HA9 241 aa19.18■□□□□ 0.66
PTCD3-202ENST00000409326 IP6K3Q96PC2 410 aa19.18■□□□□ 0.66
PTCD3-202ENST00000409326 OR1F2PQ96R84 312 aa19.18■□□□□ 0.66
PTCD3-202ENST00000409326 SERINC2Q96SA4 455 aa19.18■□□□□ 0.66
PTCD3-202ENST00000409326 CENPKQ9BS16 269 aa19.18■□□□□ 0.66
PTCD3-202ENST00000409326 TBCDQ9BTW9 1192 aa19.18■□□□□ 0.66
PTCD3-202ENST00000409326 NPLQ9BXD5 320 aaPredicted RBP19.18■□□□□ 0.66
PTCD3-202ENST00000409326 ROGDIQ9GZN7 287 aa19.18■□□□□ 0.66
PTCD3-202ENST00000409326 VIPAS39Q9H9C1 493 aa19.18■□□□□ 0.66
PTCD3-202ENST00000409326 COPS7BQ9H9Q2 264 aaPredicted RBP19.18■□□□□ 0.66
PTCD3-202ENST00000409326 MID1IP1Q9NPA3 183 aa19.18■□□□□ 0.66
PTCD3-202ENST00000409326 PRDM7Q9NQW5 492 aa19.18■□□□□ 0.66
PTCD3-202ENST00000409326 C3orf18Q9UK00 162 aa19.18■□□□□ 0.66
PTCD3-202ENST00000409326 LHX6Q9UPM6 363 aa19.18■□□□□ 0.66
PTCD3-202ENST00000409326 IDSB3KWA1 339 aa19.17■□□□□ 0.66
PTCD3-202ENST00000409326 B3GALT2O43825 422 aa19.17■□□□□ 0.66
PTCD3-202ENST00000409326 DNAJB6O75190 326 aa19.17■□□□□ 0.66
PTCD3-202ENST00000409326 JRKO75564 520 aa19.17■□□□□ 0.66
PTCD3-202ENST00000409326 SCELO95171 688 aa19.17■□□□□ 0.66
PTCD3-202ENST00000409326 ETHE1O95571 254 aa19.17■□□□□ 0.66
PTCD3-202ENST00000409326 BPGMP07738 259 aa19.17■□□□□ 0.66
PTCD3-202ENST00000409326 TSFMP43897 325 aaKnown RBP19.17■□□□□ 0.66
PTCD3-202ENST00000409326 CCR10P46092 362 aa19.17■□□□□ 0.66
PTCD3-202ENST00000409326 RAP1GDS1P52306 607 aa19.17■□□□□ 0.66
PTCD3-202ENST00000409326 RHDQ02161 417 aa19.17■□□□□ 0.66
PTCD3-202ENST00000409326 DEFB109BQ30KR1 87 aa19.17■□□□□ 0.66
PTCD3-202ENST00000409326 PPP1R32Q7Z5V6 425 aa19.17■□□□□ 0.66
PTCD3-202ENST00000409326 MRGPREQ86SM8 312 aa19.17■□□□□ 0.66
PTCD3-202ENST00000409326 CA13Q8N1Q1 262 aa19.17■□□□□ 0.66
PTCD3-202ENST00000409326 METTL6Q8TCB7 284 aa19.17■□□□□ 0.66
PTCD3-202ENST00000409326 SELENOMQ8WWX9 145 aa19.17■□□□□ 0.66
PTCD3-202ENST00000409326 SREK1Q8WXA9 508 aaKnown RBP19.17■□□□□ 0.66
PTCD3-202ENST00000409326 CNDP1Q96KN2 507 aa19.17■□□□□ 0.66
PTCD3-202ENST00000409326 SERPINI1Q99574 410 aa19.17■□□□□ 0.66
PTCD3-202ENST00000409326 TRMOQ9BU70 441 aa19.17■□□□□ 0.66
PTCD3-202ENST00000409326 KCNK9Q9NPC2 374 aa19.17■□□□□ 0.66
PTCD3-202ENST00000409326 MAN2B2Q9Y2E5 1009 aa19.17■□□□□ 0.66
PTCD3-202ENST00000409326 SAP18O00422 153 aaKnown RBP19.16■□□□□ 0.66
PTCD3-202ENST00000409326 PLPP1O14494 284 aa19.16■□□□□ 0.66
PTCD3-202ENST00000409326 NPHS1O60500 1241 aa19.16■□□□□ 0.66
PTCD3-202ENST00000409326 SEMA3DO95025 777 aa19.16■□□□□ 0.66
PTCD3-202ENST00000409326 PDYNP01213 254 aa19.16■□□□□ 0.66
PTCD3-202ENST00000409326 KRT6AP02538 564 aa19.16■□□□□ 0.66
PTCD3-202ENST00000409326 KRT6BP04259 564 aa19.16■□□□□ 0.66
PTCD3-202ENST00000409326 FHP07954 510 aa19.16■□□□□ 0.66
PTCD3-202ENST00000409326 CYC1P08574 325 aa19.16■□□□□ 0.66
PTCD3-202ENST00000409326 DHRS4L1P0CG22 281 aa19.16■□□□□ 0.66
PTCD3-202ENST00000409326 RNH1P13489 461 aaKnown RBP19.16■□□□□ 0.66
PTCD3-202ENST00000409326 CERS1P27544 350 aa19.16■□□□□ 0.66
PTCD3-202ENST00000409326 HMOX2P30519 316 aa19.16■□□□□ 0.66
PTCD3-202ENST00000409326 SSR2P43308 183 aa19.16■□□□□ 0.66
PTCD3-202ENST00000409326 SERPINB4P48594 390 aa19.16■□□□□ 0.66
PTCD3-202ENST00000409326 KRT6CP48668 564 aa19.16■□□□□ 0.66
PTCD3-202ENST00000409326 EMP2P54851 167 aa19.16■□□□□ 0.66
PTCD3-202ENST00000409326 MAGOHP61326 146 aaKnown RBP19.16■□□□□ 0.66
PTCD3-202ENST00000409326 MPP2Q14168 576 aa19.16■□□□□ 0.66
PTCD3-202ENST00000409326 TCHHL1Q5QJ38 904 aaPredicted RBP19.16■□□□□ 0.66
PTCD3-202ENST00000409326 AGBL2Q5U5Z8 902 aa19.16■□□□□ 0.66
PTCD3-202ENST00000409326 FAM219BQ5XKK7 198 aa19.16■□□□□ 0.66
PTCD3-202ENST00000409326 ZNF793Q6ZN11 406 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms