RNA–Protein interactions for RNA: ENST00000409252.6

SH3D19-202, Transcript of SH3 domain containing 19, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SH3D19, Length 4,888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-202ENST00000409252 CADM2Q8N3J6 435 aa8.07□□□□□ -1.12
SH3D19-202ENST00000409252 CHCHD4Q8N4Q1 142 aa8.07□□□□□ -1.12
SH3D19-202ENST00000409252 RCBTB1Q8NDN9 531 aa8.07□□□□□ -1.12
SH3D19-202ENST00000409252 DEFB124Q8NES8 71 aa8.07□□□□□ -1.12
SH3D19-202ENST00000409252 OR56A1Q8NGH5 318 aa8.07□□□□□ -1.12
SH3D19-202ENST00000409252 OR5M3Q8NGP4 307 aa8.07□□□□□ -1.12
SH3D19-202ENST00000409252 BMFQ96LC9 184 aa8.07□□□□□ -1.12
SH3D19-202ENST00000409252 CTRCQ99895 268 aa8.07□□□□□ -1.12
SH3D19-202ENST00000409252 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.07□□□□□ -1.12
SH3D19-202ENST00000409252 IMPAD1Q9NX62 359 aa8.07□□□□□ -1.12
SH3D19-202ENST00000409252 KLRF1Q9NZS2 232 aa8.07□□□□□ -1.12
SH3D19-202ENST00000409252 USP36Q9P275 1121 aaKnown RBP8.07□□□□□ -1.12
SH3D19-202ENST00000409252 MKL2Q9ULH7 1088 aa8.07□□□□□ -1.12
SH3D19-202ENST00000409252 COPG1Q9Y678 874 aaKnown RBP8.07□□□□□ -1.12
SH3D19-202ENST00000409252 E7ENX8 843 aa8.07□□□□□ -1.12
SH3D19-202ENST00000409252 H0YGG7 62 aa8.07□□□□□ -1.12
SH3D19-202ENST00000409252 KLHL18O94889 574 aa8.07□□□□□ -1.12
SH3D19-202ENST00000409252 C6orf47O95873 294 aa8.07□□□□□ -1.12
SH3D19-202ENST00000409252 ARF3P61204 181 aaPredicted RBP8.07□□□□□ -1.12
SH3D19-202ENST00000409252 RPS7P62081 194 aaKnown RBP8.07□□□□□ -1.12
SH3D19-202ENST00000409252 TAP2Q03519 686 aa8.07□□□□□ -1.12
SH3D19-202ENST00000409252 BROXQ5VW32 411 aa8.07□□□□□ -1.12
SH3D19-202ENST00000409252 PMS2CLQ68D20 193 aa8.07□□□□□ -1.12
SH3D19-202ENST00000409252 EPGNQ6UW88 154 aa8.07□□□□□ -1.12
SH3D19-202ENST00000409252 PLEKHM3Q6ZWE6 761 aa8.07□□□□□ -1.12
SH3D19-202ENST00000409252 PEX5LQ8IYB4 626 aa8.07□□□□□ -1.12
SH3D19-202ENST00000409252 CCDC116Q8IYX3 515 aa8.07□□□□□ -1.12
SH3D19-202ENST00000409252 EID3Q8N140 333 aa8.07□□□□□ -1.12
SH3D19-202ENST00000409252 OR2L5Q8NG80 312 aa8.07□□□□□ -1.12
SH3D19-202ENST00000409252 LPAR4Q99677 370 aa8.07□□□□□ -1.12
SH3D19-202ENST00000409252 WDR83Q9BRX9 315 aaKnown RBP8.07□□□□□ -1.12
SH3D19-202ENST00000409252 CCDC90BQ9GZT6 254 aa8.07□□□□□ -1.12
SH3D19-202ENST00000409252 EPB41L4BQ9H329 900 aa8.07□□□□□ -1.12
SH3D19-202ENST00000409252 MMADHCQ9H3L0 296 aaPredicted RBP8.07□□□□□ -1.12
SH3D19-202ENST00000409252 REEP1Q9H902 201 aa8.07□□□□□ -1.12
SH3D19-202ENST00000409252 FAM120CQ9NX05 1096 aaKnown RBP8.07□□□□□ -1.12
SH3D19-202ENST00000409252 NAALAD2Q9Y3Q0 740 aa8.07□□□□□ -1.12
SH3D19-202ENST00000409252 FNDC1Q4ZHG4 1894 aaPredicted RBP8.06□□□□□ -1.12
SH3D19-202ENST00000409252 PTPRZ1P23471 2315 aaPredicted RBP8.06□□□□□ -1.12
SH3D19-202ENST00000409252 SRPX2O60687 465 aaPredicted RBP8.06□□□□□ -1.12
SH3D19-202ENST00000409252 DEAF1O75398 565 aaPredicted RBP8.06□□□□□ -1.12
SH3D19-202ENST00000409252 SEC24DO94855 1032 aaPredicted RBP8.06□□□□□ -1.12
SH3D19-202ENST00000409252 RETP07949 1114 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 SP9P0CG40 484 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 RGS8P57771 180 aaPredicted RBP8.06□□□□□ -1.12
SH3D19-202ENST00000409252 TAS2R41P59536 307 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 PWP1Q13610 501 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 MPP2Q14168 576 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 DECR1Q16698 335 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 SPANXN4Q5MJ08 99 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 SHISA6Q6ZSJ9 500 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 COMMD6Q7Z4G1 85 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 OR4N5Q8IXE1 308 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 C7orf57Q8NEG2 295 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 ATP6V1C2Q8NEY4 427 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 OR4K1Q8NGD4 311 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 THAP3Q8WTV1 239 aaPredicted RBP8.06□□□□□ -1.12
SH3D19-202ENST00000409252 ZFPM2Q8WW38 1151 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 FNDC11Q9BVV2 318 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 ALKBH4Q9NXW9 302 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 MAGEL2Q9UJ55 1249 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 ZNF821O75541 412 aaPredicted RBP8.06□□□□□ -1.12
SH3D19-202ENST00000409252 CLEC3AO75596 197 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 RFPL3O75679 317 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 UNC5CO95185 931 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 LDLRP01130 860 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 ITGA2P17301 1181 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 CRISP3P54108 245 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 TAS2R38P59533 333 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 MED21Q13503 144 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 RCN1Q15293 331 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 SF3A2Q15428 464 aaKnown RBP8.06□□□□□ -1.12
SH3D19-202ENST00000409252 PPP1R3AQ16821 1122 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 SBSNQ6UWP8 590 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 RNF111Q6ZNA4 994 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 GALNT12Q8IXK2 581 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 LRRC25Q8N386 305 aaPredicted RBP8.06□□□□□ -1.12
SH3D19-202ENST00000409252 ZNF419Q96HQ0 510 aaPredicted RBP8.06□□□□□ -1.12
SH3D19-202ENST00000409252 UBXN10Q96LJ8 280 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 GSTO2Q9H4Y5 243 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 METTL7AQ9H8H3 244 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 ZNF304Q9HCX3 659 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 PRODH2Q9UF12 536 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 NUMA1Q14980 2115 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 SAC3D1A6NKF1 404 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 PATE3B3GLJ2 98 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 HAT1O14929 419 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 AGR2O95994 175 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 ALBP02768 609 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 OCM2P0CE71 109 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 OCMP0CE72 109 aaPredicted RBP8.06□□□□□ -1.12
SH3D19-202ENST00000409252 XCR1P46094 333 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 EMP2P54851 167 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 MTPNP58546 118 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 ABHD18Q0P651 414 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 FOXC1Q12948 553 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 PTGR1Q14914 329 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 PDCD4Q53EL6 469 aaKnown RBP8.06□□□□□ -1.12
SH3D19-202ENST00000409252 MFSD9Q8NBP5 474 aa8.06□□□□□ -1.12
SH3D19-202ENST00000409252 DNAJB8Q8NHS0 232 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms