RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 A8MUI8 341 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 IRF6O14896 467 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 MUSKO15146 869 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 RGS9O75916 674 aaPredicted RBP5.89□□□□□ -1.47
SCN1A-203ENST00000409050 RETP07949 1114 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 BMP2P12643 396 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 RNH1P13489 461 aaKnown RBP5.89□□□□□ -1.47
SCN1A-203ENST00000409050 PORP16435 677 aaPredicted RBP5.89□□□□□ -1.47
SCN1A-203ENST00000409050 MYF6P23409 242 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 PLP2Q04941 152 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 CILP2Q8IUL8 1156 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 TRAM1L1Q8N609 369 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 MAFIPQ8WZ33 124 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 TTYH2Q9BSA4 534 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 NAA11Q9BSU3 229 aaPredicted RBP5.89□□□□□ -1.47
SCN1A-203ENST00000409050 TAS2R9Q9NYW1 312 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 ERVK-11Q9UQG0 969 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 SH2B3Q9UQQ2 575 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 FXYD6-FXYD2A0A087WZ82 144 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 ARL5CA6NH57 179 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 A8MX80 341 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 FTCDNL1E5RQL4 147 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 GPR25O00155 361 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 EMC8O43402 210 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 FAM155BO75949 473 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 RASGRP1O95267 797 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 FMO3P31513 532 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 POU6F2P78424 691 aaPredicted RBP5.89□□□□□ -1.47
SCN1A-203ENST00000409050 BLOC1S1P78537 153 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 MZT1Q08AG7 82 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 KEAP1Q14145 624 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 GBX1Q14549 363 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 RAB39AQ14964 217 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 ECM1Q16610 540 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 SLC10A6Q3KNW5 377 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 GPRC6AQ5T6X5 926 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 OGFRL1Q5TC84 451 aaPredicted RBP5.89□□□□□ -1.47
SCN1A-203ENST00000409050 PAQR3Q6TCH7 311 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 TMEM205Q6UW68 189 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 NCCRP1Q6ZVX7 275 aaPredicted RBP5.89□□□□□ -1.47
SCN1A-203ENST00000409050 OR14C36Q8NHC7 312 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 MAPK15Q8TD08 544 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 ZNF675Q8TD23 568 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 PIGKQ92643 395 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 FAM46BQ96A09 425 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 SCRN2Q96FV2 425 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 NPY6RQ99463 290 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 ZNF559Q9BR84 538 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 FXYD6Q9H0Q3 95 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 GPN2Q9H9Y4 310 aaPredicted RBP5.89□□□□□ -1.47
SCN1A-203ENST00000409050 ACP6Q9NPH0 428 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 ARMC1Q9NVT9 282 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 FAM53CQ9NYF3 392 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 LAMP5Q9UJQ1 280 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 M0R036 132 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 FHP07954 510 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 UCHL1P09936 223 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 OR12D2P58182 307 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 RPP30P78346 268 aaKnown RBP5.89□□□□□ -1.47
SCN1A-203ENST00000409050 SLC25A11Q02978 314 aaKnown RBP5.89□□□□□ -1.47
SCN1A-203ENST00000409050 MXD1Q05195 221 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 SCAPQ12770 1279 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 ANKDD1AQ495B1 522 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 VITQ6UXI7 678 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 CLEC20AQ6ZU45 233 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 PGAP1Q75T13 922 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 SHFQ7M4L6 423 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 UBE2Q1Q7Z7E8 422 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 KBTBD6Q86V97 674 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 C7orf61Q8IZ16 206 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 ARL14Q8N4G2 192 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 OR7D4Q8NG98 312 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 SLC35F5Q8WV83 523 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 B3GNT5Q9BYG0 378 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 RNF121Q9H920 327 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 SIAEQ9HAT2 523 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 HEBP1Q9NRV9 189 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 UTS2RQ9UKP6 389 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 SLC6A5Q9Y345 797 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 NOX1Q9Y5S8 564 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 ANKRD66B4E2M5 251 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 TYROBPO43914 113 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 CST3P01034 146 aaPredicted RBP5.89□□□□□ -1.47
SCN1A-203ENST00000409050 PCCBP05166 539 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 H2AFB2P0C5Z0 115 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 PDHA2P29803 388 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 ZNF41P51814 821 aaPredicted RBP5.89□□□□□ -1.47
SCN1A-203ENST00000409050 RPA4Q13156 261 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 METAP1DQ6UB28 335 aaPredicted RBP5.89□□□□□ -1.47
SCN1A-203ENST00000409050 CEACAM20Q6UY09 585 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 GALNTL5Q7Z4T8 443 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 ANKRD13BQ86YJ7 626 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 C1orf52Q8N6N3 182 aaKnown RBP5.89□□□□□ -1.47
SCN1A-203ENST00000409050 OR4K17Q8NGC6 315 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 ASB15Q8WXK1 588 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 TFAP2BQ92481 460 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 SIPA1Q96FS4 1042 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 PKP2Q99959 881 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 CCDC106Q9BWC9 280 aa5.89□□□□□ -1.47
SCN1A-203ENST00000409050 B3GNT4Q9C0J1 378 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms