RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 RETREG1Q9H6L5 497 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 KCNN3Q9UGI6 736 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 NUFIP1Q9UHK0 495 aaKnown RBP12.53□□□□□ -0.4
RNF43-201ENST00000407977 A8MV72 311 aaPredicted RBP12.53□□□□□ -0.4
RNF43-201ENST00000407977 SLC33A1O00400 549 aaPredicted RBP12.53□□□□□ -0.4
RNF43-201ENST00000407977 SCGB1D2O95969 90 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 CH25HO95992 272 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 TM4SF1P30408 202 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 HOXC12P31275 282 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 KDELR2P33947 212 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 BLKP51451 505 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 TAS2R50P59544 299 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 POU4F2Q12837 409 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 TPRG1Q6ZUI0 275 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 ZFAND4Q86XD8 727 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 OR2AP1Q8NGE2 309 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 DDX1Q92499 740 aaKnown RBP12.53□□□□□ -0.4
RNF43-201ENST00000407977 CCDC120Q96HB5 630 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 SMOXQ9NWM0 555 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 PSAT1Q9Y617 370 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 SLC1A7O00341 560 aa12.52□□□□□ -0.4
RNF43-201ENST00000407977 EIF1AYO14602 144 aaKnown RBP12.52□□□□□ -0.4
RNF43-201ENST00000407977 ALDOAP04075 364 aaKnown RBP12.52□□□□□ -0.4
RNF43-201ENST00000407977 FUT4P22083 530 aa12.52□□□□□ -0.4
RNF43-201ENST00000407977 MAP2K4P45985 399 aa12.52□□□□□ -0.4
RNF43-201ENST00000407977 EIF1AXP47813 144 aaKnown RBP12.52□□□□□ -0.4
RNF43-201ENST00000407977 ERVK-21P61565 698 aa12.52□□□□□ -0.4
RNF43-201ENST00000407977 SNTB2Q13425 540 aaKnown RBP12.52□□□□□ -0.4
RNF43-201ENST00000407977 UGT2A3Q6UWM9 527 aa12.52□□□□□ -0.4
RNF43-201ENST00000407977 KBTBD6Q86V97 674 aa12.52□□□□□ -0.4
RNF43-201ENST00000407977 TICAM1Q8IUC6 712 aa12.52□□□□□ -0.4
RNF43-201ENST00000407977 PLD6Q8N2A8 252 aaKnown RBP12.52□□□□□ -0.4
RNF43-201ENST00000407977 SCAMP5Q8TAC9 235 aa12.52□□□□□ -0.4
RNF43-201ENST00000407977 SLC5A11Q8WWX8 675 aa12.52□□□□□ -0.4
RNF43-201ENST00000407977 TTYH2Q9BSA4 534 aa12.52□□□□□ -0.4
RNF43-201ENST00000407977 YIPF4Q9BSR8 244 aa12.52□□□□□ -0.4
RNF43-201ENST00000407977 TRMT61BQ9BVS5 477 aaKnown RBP12.52□□□□□ -0.4
RNF43-201ENST00000407977 SEZ6LQ9BYH1 1024 aa12.52□□□□□ -0.4
RNF43-201ENST00000407977 DUS2Q9NX74 493 aaKnown RBP12.52□□□□□ -0.4
RNF43-201ENST00000407977 MSRAQ9UJ68 235 aa12.52□□□□□ -0.4
RNF43-201ENST00000407977 RNF11Q9Y3C5 154 aa12.52□□□□□ -0.4
RNF43-201ENST00000407977 PTPN2P17706 415 aa12.52□□□□□ -0.4
RNF43-201ENST00000407977 DIO3P55073 304 aa12.52□□□□□ -0.4
RNF43-201ENST00000407977 BLOC1S3Q6QNY0 202 aa12.52□□□□□ -0.4
RNF43-201ENST00000407977 KCTD9Q7L273 389 aa12.52□□□□□ -0.4
RNF43-201ENST00000407977 RAB11FIP2Q7L804 512 aa12.52□□□□□ -0.4
RNF43-201ENST00000407977 NSUN3Q9H649 340 aaKnown RBP12.52□□□□□ -0.4
RNF43-201ENST00000407977 C14orf119Q9NWQ9 140 aa12.52□□□□□ -0.4
RNF43-201ENST00000407977 EBF1Q9UH73 591 aa12.52□□□□□ -0.4
RNF43-201ENST00000407977 PCDH17O14917 1159 aa12.52□□□□□ -0.41
RNF43-201ENST00000407977 CYP17A1P05093 508 aa12.52□□□□□ -0.41
RNF43-201ENST00000407977 VIPR1P32241 457 aa12.52□□□□□ -0.41
RNF43-201ENST00000407977 CAPZA1P52907 286 aa12.52□□□□□ -0.41
RNF43-201ENST00000407977 TIGD5Q53EQ6 642 aa12.52□□□□□ -0.41
RNF43-201ENST00000407977 POGLUT1Q8NBL1 392 aa12.52□□□□□ -0.41
RNF43-201ENST00000407977 DPF3Q92784 378 aa12.52□□□□□ -0.41
RNF43-201ENST00000407977 POLE4Q9NR33 117 aa12.52□□□□□ -0.41
RNF43-201ENST00000407977 PADI2Q9Y2J8 665 aa12.52□□□□□ -0.41
RNF43-201ENST00000407977 HTR3EA5X5Y0 456 aa12.52□□□□□ -0.41
RNF43-201ENST00000407977 ADAMTS3O15072 1205 aa12.52□□□□□ -0.41
RNF43-201ENST00000407977 EEF1E1O43324 174 aaKnown RBP12.52□□□□□ -0.41
RNF43-201ENST00000407977 C6orf47O95873 294 aa12.52□□□□□ -0.41
RNF43-201ENST00000407977 SLURP2P0DP57 97 aa12.52□□□□□ -0.41
RNF43-201ENST00000407977 HTR2BP41595 481 aa12.52□□□□□ -0.41
RNF43-201ENST00000407977 FNTBP49356 437 aa12.52□□□□□ -0.41
RNF43-201ENST00000407977 RGS19P49795 217 aa12.52□□□□□ -0.41
RNF43-201ENST00000407977 PLEKHS1Q5SXH7 462 aa12.52□□□□□ -0.41
RNF43-201ENST00000407977 LIPKQ5VXJ0 399 aa12.52□□□□□ -0.41
RNF43-201ENST00000407977 SLC22A10Q63ZE4 541 aa12.52□□□□□ -0.41
RNF43-201ENST00000407977 OR2T33Q8NG76 320 aa12.52□□□□□ -0.41
RNF43-201ENST00000407977 OR10T2Q8NGX3 314 aa12.52□□□□□ -0.41
RNF43-201ENST00000407977 TESCQ96BS2 214 aa12.52□□□□□ -0.41
RNF43-201ENST00000407977 TWNKQ96RR1 684 aa12.52□□□□□ -0.41
RNF43-201ENST00000407977 TAS2R8Q9NYW2 309 aa12.52□□□□□ -0.41
RNF43-201ENST00000407977 HS3ST4Q9Y661 456 aa12.52□□□□□ -0.41
RNF43-201ENST00000407977 CLCA3PQ9Y6N3 262 aa12.52□□□□□ -0.41
RNF43-201ENST00000407977 LOC100509620A0A075B734 347 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 A0A1B0GVI7 797 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 SCDO00767 359 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 PGDP52209 483 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 CRISP1P54107 249 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 SP3Q02447 781 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 RNF130Q86XS8 419 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 OR5P2Q8WZ92 322 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 MYRFLQ96LU7 910 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 KCNA7Q96RP8 456 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 ARL6Q9H0F7 186 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 RGCCQ9H4X1 137 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 UNKLQ9H9P5 680 aaKnown RBP12.51□□□□□ -0.41
RNF43-201ENST00000407977 ARMC1Q9NVT9 282 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 ASB4Q9Y574 426 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 SLC16A5O15375 505 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 APOC3P02656 99 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 JUNP05412 331 aaKnown RBP12.51□□□□□ -0.41
RNF43-201ENST00000407977 CFHP08603 1231 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 S100PP25815 95 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 RPS24P62847 133 aaKnown RBP12.51□□□□□ -0.41
RNF43-201ENST00000407977 GALNT1Q10472 559 aaPredicted RBP12.51□□□□□ -0.41
RNF43-201ENST00000407977 LRRTM4Q86VH4 590 aa12.51□□□□□ -0.41
RNF43-201ENST00000407977 FOXRED2Q8IWF2 684 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms