RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 ATAD2BQ9ULI0 1458 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 ATP6AP2A0A1C7CYW4 349 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 FPGTO14772 594 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 CHUKO15111 745 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 KIF5CO60282 957 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 NME2P1O60361 137 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 GLRA3O75311 464 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 ATP6V1G1O75348 118 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 CDK2AP2O75956 126 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 DIRAS3O95661 229 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 NR3C1P04150 777 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 ODC1P11926 461 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 PEX19P40855 299 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 OR1D5P58170 312 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 SSTP61278 116 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 CCZ1BP86790 482 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 CCZ1P86791 482 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 POU3F1Q03052 451 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 GABPAQ06546 454 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 GPR50Q13585 617 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 SQLEQ14534 574 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 OR4C11Q6IEV9 310 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 IRGCQ6NXR0 463 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 OLFM4Q6UX06 510 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 CYP4V2Q6ZWL3 525 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 G2E3Q7L622 706 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 ZNF444Q8N0Y2 327 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 ZNF843Q8N446 348 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 ZNF383Q8NA42 475 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 MINDY2Q8NBR6 621 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 RNF149Q8NC42 400 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 TRPV3Q8NET8 790 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 OR7A2PQ8NGA2 310 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 OR4C15Q8NGM1 316 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 OR13C3Q8NGS6 347 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 CD99L2Q8TCZ2 262 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 UBTD2Q8WUN7 234 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 ITFG2Q969R8 447 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 RBM18Q96H35 190 aaKnown RBP4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 ST6GAL2Q96JF0 529 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 GPR137Q96N19 417 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 PIGQQ9BRB3 760 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 RHNO1Q9BSD3 238 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 FTHL17Q9BXU8 183 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 EGLN1Q9GZT9 426 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 THAP2Q9H0W7 228 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 DPH5Q9H2P9 285 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 TFB2MQ9H5Q4 396 aaKnown RBP4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 EGLN3Q9H6Z9 239 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 EXOC1Q9NV70 894 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 FLRT3Q9NZU0 649 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 ANKMY1Q9P2S6 941 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 EXOC7Q9UPT5 735 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 ERVK-19Q9WJR5 959 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 MRPS2Q9Y399 296 aaKnown RBP4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 SPATA31D1Q6ZQQ2 1576 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 NCAPD2Q15021 1401 aa4.38□□□□□ -1.71
HMGB1P13-201ENST00000406019 A0A0U1RRA0 63 aa4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 CCDC162PA2VCL2 907 aa4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 ERICH4A6NGS2 130 aa4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 ZNF732B4DXR9 585 aa4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 PES1O00541 588 aaKnown RBP4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 MLNRO43193 412 aa4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 HMMRO75330 724 aa4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 OR6A2O95222 327 aa4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 CPNE6O95741 557 aa4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 EPOP01588 193 aa4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 IGLV2-11P01706 119 aa4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 SFTPBP07988 381 aa4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 SERPINF2P08697 491 aa4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 CETPP11597 493 aa4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 ANPEPP15144 967 aa4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 GJB2P29033 226 aa4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 DCTP40126 519 aa4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 MAGEA4P43358 317 aa4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 TNFRSF4P43489 277 aa4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 CD151P48509 253 aa4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 DNA2P51530 1060 aa4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 MYL7Q01449 175 aa4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 PDZK1IP1Q13113 114 aa4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 SRSF9Q13242 221 aaKnown RBP eCLIP4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 SCGB2A2Q13296 93 aa4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 GPR17Q13304 367 aa4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 TECRLQ5HYJ1 363 aa4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 ZNF776Q68DI1 518 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 C15orf52Q6ZUT6 534 aaKnown RBP4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 C9orf139Q6ZV77 190 aa4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 ADGRD2Q7Z7M1 963 aa4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 NFE4Q86UQ8 179 aa4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 AMZ2Q86W34 360 aa4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 GMCL1P1Q8NEA9 526 aa4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 FAM71CQ8NEG0 241 aa4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 SPATA18Q8TC71 538 aa4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 SECTM1Q8WVN6 248 aa4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 GLYATL1Q969I3 302 aa4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 VPS39Q96JC1 886 aa4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 ZNF583Q96ND8 569 aa4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 NECTIN4Q96NY8 510 aa4.37□□□□□ -1.71
HMGB1P13-201ENST00000406019 COQ7Q99807 217 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms