RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 XKR6Q5GH73 641 aa19.03■□□□□ 0.64
CCDC47-202ENST00000403162 DGKKQ5KSL6 1271 aa19.03■□□□□ 0.64
CCDC47-202ENST00000403162 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.03■□□□□ 0.64
CCDC47-202ENST00000403162 ZDHHC20Q5W0Z9 365 aa19.03■□□□□ 0.64
CCDC47-202ENST00000403162 ZNF367Q7RTV3 350 aa19.03■□□□□ 0.64
CCDC47-202ENST00000403162 SYTL1Q8IYJ3 562 aa19.03■□□□□ 0.64
CCDC47-202ENST00000403162 NAGSQ8N159 534 aa19.03■□□□□ 0.64
CCDC47-202ENST00000403162 ARL14EPQ8N8R7 260 aaPredicted RBP19.03■□□□□ 0.64
CCDC47-202ENST00000403162 C9orf43Q8TAL5 461 aaPredicted RBP19.03■□□□□ 0.64
CCDC47-202ENST00000403162 COQ8BQ96D53 544 aa19.03■□□□□ 0.64
CCDC47-202ENST00000403162 CENPOQ9BU64 300 aa19.03■□□□□ 0.64
CCDC47-202ENST00000403162 BBS2Q9BXC9 721 aa19.03■□□□□ 0.64
CCDC47-202ENST00000403162 ABCB8Q9NUT2 735 aa19.03■□□□□ 0.64
CCDC47-202ENST00000403162 RLIMQ9NVW2 624 aa19.03■□□□□ 0.64
CCDC47-202ENST00000403162 ZNF282Q9UDV7 671 aaPredicted RBP19.03■□□□□ 0.64
CCDC47-202ENST00000403162 TMPRSS11EQ9UL52 423 aa19.03■□□□□ 0.64
CCDC47-202ENST00000403162 PCDHGB6Q9Y5F9 930 aa19.03■□□□□ 0.64
CCDC47-202ENST00000403162 H0YIV9 168 aa19.02■□□□□ 0.64
CCDC47-202ENST00000403162 NRG2O14511 850 aaPredicted RBP19.02■□□□□ 0.64
CCDC47-202ENST00000403162 KPNA5O15131 536 aa19.02■□□□□ 0.64
CCDC47-202ENST00000403162 HLA-EP13747 358 aa19.02■□□□□ 0.64
CCDC47-202ENST00000403162 ATP1B2P14415 290 aaPredicted RBP19.02■□□□□ 0.64
CCDC47-202ENST00000403162 ALOX12P18054 663 aa19.02■□□□□ 0.64
CCDC47-202ENST00000403162 CCR2P41597 374 aa19.02■□□□□ 0.64
CCDC47-202ENST00000403162 LRRC74AQ0VAA2 488 aa19.02■□□□□ 0.64
CCDC47-202ENST00000403162 ST3GAL4Q11206 333 aa19.02■□□□□ 0.64
CCDC47-202ENST00000403162 NDUFA5Q16718 116 aa19.02■□□□□ 0.64
CCDC47-202ENST00000403162 IFI44LQ53G44 452 aa19.02■□□□□ 0.64
CCDC47-202ENST00000403162 TCEAL5Q5H9L2 206 aa19.02■□□□□ 0.64
CCDC47-202ENST00000403162 GRASPQ7Z6J2 395 aaPredicted RBP19.02■□□□□ 0.64
CCDC47-202ENST00000403162 HEATR4Q86WZ0 1026 aa19.02■□□□□ 0.64
CCDC47-202ENST00000403162 ZNF707Q96C28 371 aaPredicted RBP19.02■□□□□ 0.64
CCDC47-202ENST00000403162 ECHDC3Q96DC8 303 aa19.02■□□□□ 0.64
CCDC47-202ENST00000403162 MCCC1Q96RQ3 725 aaPredicted RBP19.02■□□□□ 0.64
CCDC47-202ENST00000403162 SLC22A12Q96S37 553 aa19.02■□□□□ 0.64
CCDC47-202ENST00000403162 RNF167Q9H6Y7 350 aa19.02■□□□□ 0.64
CCDC47-202ENST00000403162 PCDH7O60245 1069 aa19.02■□□□□ 0.63
CCDC47-202ENST00000403162 IDSP22304 550 aa19.02■□□□□ 0.63
CCDC47-202ENST00000403162 LHCGRP22888 699 aa19.02■□□□□ 0.63
CCDC47-202ENST00000403162 DEFA1P59665 94 aa19.02■□□□□ 0.63
CCDC47-202ENST00000403162 DEFA3P59666 94 aa19.02■□□□□ 0.63
CCDC47-202ENST00000403162 NTHL1P78549 312 aa19.02■□□□□ 0.63
CCDC47-202ENST00000403162 DOC2AQ14183 400 aa19.02■□□□□ 0.63
CCDC47-202ENST00000403162 SOWAHCQ53LP3 525 aaPredicted RBP19.02■□□□□ 0.63
CCDC47-202ENST00000403162 GRHL2Q6ISB3 625 aa19.02■□□□□ 0.63
CCDC47-202ENST00000403162 C19orf48Q6RUI8 117 aa19.02■□□□□ 0.63
CCDC47-202ENST00000403162 TMC5Q6UXY8 1006 aa19.02■□□□□ 0.63
CCDC47-202ENST00000403162 RFLNAQ6ZTI6 216 aa19.02■□□□□ 0.63
CCDC47-202ENST00000403162 LGI4Q8N135 537 aa19.02■□□□□ 0.63
CCDC47-202ENST00000403162 TCEAL4Q96EI5 215 aa19.02■□□□□ 0.63
CCDC47-202ENST00000403162 NIPSNAP1Q9BPW8 284 aa19.02■□□□□ 0.63
CCDC47-202ENST00000403162 EHD1Q9H4M9 534 aa19.02■□□□□ 0.63
CCDC47-202ENST00000403162 SIAEQ9HAT2 523 aa19.02■□□□□ 0.63
CCDC47-202ENST00000403162 THSD1Q9NS62 852 aa19.02■□□□□ 0.63
CCDC47-202ENST00000403162 RNASET2O00584 256 aaKnown RBP19.01■□□□□ 0.63
CCDC47-202ENST00000403162 FGF19O95750 216 aa19.01■□□□□ 0.63
CCDC47-202ENST00000403162 HNF4AP41235 474 aa19.01■□□□□ 0.63
CCDC47-202ENST00000403162 EPHA5P54756 1037 aa19.01■□□□□ 0.63
CCDC47-202ENST00000403162 SPIBQ01892 262 aa19.01■□□□□ 0.63
CCDC47-202ENST00000403162 DDX39BQ13838 428 aaKnown RBP19.01■□□□□ 0.63
CCDC47-202ENST00000403162 SF1Q15637 639 aaKnown RBP19.01■□□□□ 0.63
CCDC47-202ENST00000403162 CARTPTQ16568 116 aa19.01■□□□□ 0.63
CCDC47-202ENST00000403162 GDPD3Q7L5L3 318 aa19.01■□□□□ 0.63
CCDC47-202ENST00000403162 NLRP8Q86W28 1048 aa19.01■□□□□ 0.63
CCDC47-202ENST00000403162 THOC6Q86W42 341 aaKnown RBP19.01■□□□□ 0.63
CCDC47-202ENST00000403162 SMG7Q92540 1137 aaKnown RBP19.01■□□□□ 0.63
CCDC47-202ENST00000403162 Q96MT0 163 aa19.01■□□□□ 0.63
CCDC47-202ENST00000403162 CHCHD6Q9BRQ6 235 aa19.01■□□□□ 0.63
CCDC47-202ENST00000403162 CCM2Q9BSQ5 444 aa19.01■□□□□ 0.63
CCDC47-202ENST00000403162 A0A1W2PPC1 479 aa19■□□□□ 0.63
CCDC47-202ENST00000403162 E7EQ34 232 aa19■□□□□ 0.63
CCDC47-202ENST00000403162 LOC110117498-PIK3R3F6TDL0 507 aa19■□□□□ 0.63
CCDC47-202ENST00000403162 ANXA4P09525 319 aaPredicted RBP19■□□□□ 0.63
CCDC47-202ENST00000403162 C1SP09871 688 aa19■□□□□ 0.63
CCDC47-202ENST00000403162 SOX6P35712 828 aa19■□□□□ 0.63
CCDC47-202ENST00000403162 MVDP53602 400 aa19■□□□□ 0.63
CCDC47-202ENST00000403162 HYAL1Q12794 435 aa19■□□□□ 0.63
CCDC47-202ENST00000403162 LMAN2Q12907 356 aa19■□□□□ 0.63
CCDC47-202ENST00000403162 SF3B4Q15427 424 aaKnown RBP eCLIP19■□□□□ 0.638e-19■■■■■ 28.8
CCDC47-202ENST00000403162 EXOC3L2Q2M3D2 409 aa19■□□□□ 0.63
CCDC47-202ENST00000403162 CCBE1Q6UXH8 406 aaPredicted RBP19■□□□□ 0.63
CCDC47-202ENST00000403162 CCDC190Q86UF4 302 aa19■□□□□ 0.63
CCDC47-202ENST00000403162 C1orf52Q8N6N3 182 aaKnown RBP19■□□□□ 0.63
CCDC47-202ENST00000403162 OR4A15Q8NGL6 344 aa19■□□□□ 0.63
CCDC47-202ENST00000403162 PIK3R3Q92569 461 aa19■□□□□ 0.63
CCDC47-202ENST00000403162 CDCA4Q9BXL8 241 aa19■□□□□ 0.63
CCDC47-202ENST00000403162 SFXN1Q9H9B4 322 aa19■□□□□ 0.63
CCDC47-202ENST00000403162 IMPAD1Q9NX62 359 aa19■□□□□ 0.63
CCDC47-202ENST00000403162 KMOO15229 486 aa19■□□□□ 0.63
CCDC47-202ENST00000403162 TNFRSF21O75509 655 aa19■□□□□ 0.63
CCDC47-202ENST00000403162 CKMP06732 381 aa19■□□□□ 0.63
CCDC47-202ENST00000403162 ITGA2P17301 1181 aa19■□□□□ 0.63
CCDC47-202ENST00000403162 PIK3CBP42338 1070 aa19■□□□□ 0.63
CCDC47-202ENST00000403162 CDH12P55289 794 aa19■□□□□ 0.63
CCDC47-202ENST00000403162 SNRPD1P62314 119 aaKnown RBP19■□□□□ 0.63
CCDC47-202ENST00000403162 PCDH1Q08174 1060 aa19■□□□□ 0.63
CCDC47-202ENST00000403162 TIMM50Q3ZCQ8 353 aa19■□□□□ 0.63
CCDC47-202ENST00000403162 SPANXN2Q5MJ10 180 aa19■□□□□ 0.63
CCDC47-202ENST00000403162 SERPINA13PQ6UXR4 307 aa19■□□□□ 0.63
CCDC47-202ENST00000403162 SLC7A5P1Q8MH63 180 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms