RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 SVOPQ8N4V2 548 aa16.33■□□□□ 0.21
SNRNP70-202ENST00000401730 CELF5Q8N6W0 485 aaKnown RBP16.33■□□□□ 0.21
SNRNP70-202ENST00000401730 KREMEN2Q8NCW0 462 aa16.33■□□□□ 0.21
SNRNP70-202ENST00000401730 ZFYVE19Q96K21 471 aa16.33■□□□□ 0.21
SNRNP70-202ENST00000401730 CCM2Q9BSQ5 444 aa16.33■□□□□ 0.21
SNRNP70-202ENST00000401730 SPATA6Q9NWH7 488 aaPredicted RBP16.33■□□□□ 0.21
SNRNP70-202ENST00000401730 AP3M1Q9Y2T2 418 aa16.33■□□□□ 0.21
SNRNP70-202ENST00000401730 SPEGQ15772 3267 aa16.33■□□□□ 0.2
SNRNP70-202ENST00000401730 WASH3PC4AMC7 463 aa16.33■□□□□ 0.2
SNRNP70-202ENST00000401730 APOL3O95236 402 aa16.33■□□□□ 0.2
SNRNP70-202ENST00000401730 OLFM2O95897 454 aa16.33■□□□□ 0.2
SNRNP70-202ENST00000401730 ADRA2AP08913 450 aa16.33■□□□□ 0.2
SNRNP70-202ENST00000401730 POLR2LP62875 67 aaKnown RBP16.33■□□□□ 0.2
SNRNP70-202ENST00000401730 IL18R1Q13478 541 aa16.33■□□□□ 0.2
SNRNP70-202ENST00000401730 IQCCQ4KMZ1 466 aa16.33■□□□□ 0.2
SNRNP70-202ENST00000401730 LIPJQ5W064 366 aa16.33■□□□□ 0.2
SNRNP70-202ENST00000401730 SPATC1Q76KD6 591 aa16.33■□□□□ 0.2
SNRNP70-202ENST00000401730 ADIPOR2Q86V24 386 aa16.33■□□□□ 0.2
SNRNP70-202ENST00000401730 TAGAPQ8N103 731 aa16.33■□□□□ 0.2
SNRNP70-202ENST00000401730 OR8J2Q8NGG1 315 aa16.33■□□□□ 0.2
SNRNP70-202ENST00000401730 OR52E4Q8NGH9 312 aa16.33■□□□□ 0.2
SNRNP70-202ENST00000401730 ITPAQ9BY32 194 aa16.33■□□□□ 0.2
SNRNP70-202ENST00000401730 DDX28Q9NUL7 540 aaKnown RBP16.33■□□□□ 0.2
SNRNP70-202ENST00000401730 SCN8AQ9UQD0 1980 aa16.33■□□□□ 0.2
SNRNP70-202ENST00000401730 EYSQ5T1H1 3165 aa16.33■□□□□ 0.2
SNRNP70-202ENST00000401730 NME6O75414 186 aaPredicted RBP16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 POLR2EP19388 210 aaKnown RBP16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 MPEG1Q2M385 716 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 PROX2Q3B8N5 592 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 ARMCX4Q5H9R4 360 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 PLPP4Q5VZY2 271 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 ERICH5Q6P6B1 374 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 PRSS48Q7RTY5 328 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 TMC8Q8IU68 726 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 FAM9CQ8IZT9 166 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 PPCDCQ96CD2 204 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 ZSWIM3Q96MP5 696 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 C14orf119Q9NWQ9 140 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 QPCTLQ9NXS2 382 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 SCHIP1Q9P0W5 487 aaPredicted RBP16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 SNX11Q9Y5W9 270 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 HIDE1A8MVS5 230 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 MFN2O95140 757 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 ALPPL2P10696 532 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 JUNDP17535 347 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 TIA1P31483 386 aaKnown RBP eCLIP16.32■□□□□ 0.23e-8■■□□□ 11.5
SNRNP70-202ENST00000401730 TGM4P49221 684 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 SELENOWP63302 87 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 NFE2L1Q14494 772 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 DUSP7Q16829 419 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 MED27Q6P2C8 311 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 ZNF675Q8TD23 568 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 FOPNLQ96NB1 174 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 EMILIN2Q9BXX0 1053 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 TMEM39AQ9NV64 488 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 ANKDD1BA6NHY2 528 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 ATG13O75143 517 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 FGF18O76093 207 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 EFEMP2O95967 443 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 IL3P08700 152 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 GSTM1P09488 218 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 MPC1LP0DKB6 136 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 SPNP16150 400 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 VIPR1P32241 457 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 DOC2BQ14184 412 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 UBE2UQ5VVX9 321 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 RSBN1Q5VWQ0 802 aaPredicted RBP16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 RBM45Q8IUH3 476 aaKnown RBP16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 SFTPA1Q8IWL2 248 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 FAM20CQ8IXL6 584 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 DNAJB8Q8NHS0 232 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 UCN3Q969E3 161 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 GLYATL1Q969I3 302 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 FAM129BQ96TA1 746 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 BTBD2Q9BX70 525 aa16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 TP63Q9H3D4 680 aaPredicted RBP16.32■□□□□ 0.2
SNRNP70-202ENST00000401730 C1orf226A1L170 272 aa16.31■□□□□ 0.2
SNRNP70-202ENST00000401730 A8MV72 311 aaPredicted RBP16.31■□□□□ 0.2
SNRNP70-202ENST00000401730 ZNF197O14709 1029 aa16.31■□□□□ 0.2
SNRNP70-202ENST00000401730 PTNP21246 168 aa16.31■□□□□ 0.2
SNRNP70-202ENST00000401730 CD40LGP29965 261 aa16.31■□□□□ 0.2
SNRNP70-202ENST00000401730 HSPB3Q12988 150 aa16.31■□□□□ 0.2
SNRNP70-202ENST00000401730 NOGQ13253 232 aa16.31■□□□□ 0.2
SNRNP70-202ENST00000401730 TCEAL5Q5H9L2 206 aa16.31■□□□□ 0.2
SNRNP70-202ENST00000401730 RAET1GQ6H3X3 334 aa16.31■□□□□ 0.2
SNRNP70-202ENST00000401730 AQP11Q8NBQ7 271 aa16.31■□□□□ 0.2
SNRNP70-202ENST00000401730 BTN2A2Q8WVV5 523 aa16.31■□□□□ 0.2
SNRNP70-202ENST00000401730 IRF7Q92985 503 aa16.31■□□□□ 0.2
SNRNP70-202ENST00000401730 MACROD1Q9BQ69 325 aa16.31■□□□□ 0.2
SNRNP70-202ENST00000401730 MIEF1Q9NQG6 463 aa16.31■□□□□ 0.2
SNRNP70-202ENST00000401730 GULP1Q9UBP9 304 aa16.31■□□□□ 0.2
SNRNP70-202ENST00000401730 PCDHGA3Q9Y5H0 932 aa16.31■□□□□ 0.2
SNRNP70-202ENST00000401730 ASNA1O43681 348 aa16.31■□□□□ 0.2
SNRNP70-202ENST00000401730 SLCO2B1O94956 709 aa16.31■□□□□ 0.2
SNRNP70-202ENST00000401730 TGM1P22735 817 aa16.31■□□□□ 0.2
SNRNP70-202ENST00000401730 ITGB8P26012 769 aa16.31■□□□□ 0.2
SNRNP70-202ENST00000401730 CDK6Q00534 326 aa16.31■□□□□ 0.2
SNRNP70-202ENST00000401730 CSTF3Q12996 717 aaKnown RBP16.31■□□□□ 0.2
SNRNP70-202ENST00000401730 BCL2A1Q16548 175 aa16.31■□□□□ 0.2
SNRNP70-202ENST00000401730 VASH1Q7L8A9 365 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms