RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 ZNF578Q96N58 590 aaPredicted RBP15.11■□□□□ 0.01
HMGA1-204ENST00000401473 QRFPRQ96P65 431 aa15.11■□□□□ 0.01
HMGA1-204ENST00000401473 SERPINI1Q99574 410 aa15.11■□□□□ 0.01
HMGA1-204ENST00000401473 CCDC86Q9H6F5 360 aaKnown RBP15.11■□□□□ 0.01
HMGA1-204ENST00000401473 ANKHQ9HCJ1 492 aa15.11■□□□□ 0.01
HMGA1-204ENST00000401473 DKK4Q9UBT3 224 aa15.11■□□□□ 0.01
HMGA1-204ENST00000401473 PADI1Q9ULC6 663 aa15.11■□□□□ 0.01
HMGA1-204ENST00000401473 ZNF195O14628 629 aa15.1■□□□□ 0.01
HMGA1-204ENST00000401473 GBAP04062 536 aa15.1■□□□□ 0.01
HMGA1-204ENST00000401473 HSD3B1P14060 373 aa15.1■□□□□ 0.01
HMGA1-204ENST00000401473 HSD3B2P26439 372 aa15.1■□□□□ 0.01
HMGA1-204ENST00000401473 OLR1P78380 273 aa15.1■□□□□ 0.01
HMGA1-204ENST00000401473 DCDP81605 110 aaKnown RBP15.1■□□□□ 0.01
HMGA1-204ENST00000401473 MAT1AQ00266 395 aaKnown RBP15.1■□□□□ 0.01
HMGA1-204ENST00000401473 FOXK2Q01167 660 aa15.1■□□□□ 0.01
HMGA1-204ENST00000401473 BTKQ06187 659 aa15.1■□□□□ 0.01
HMGA1-204ENST00000401473 PDCD2Q16342 344 aaPredicted RBP15.1■□□□□ 0.01
HMGA1-204ENST00000401473 NKAIN1Q4KMZ8 207 aa15.1■□□□□ 0.01
HMGA1-204ENST00000401473 OR4C11Q6IEV9 310 aa15.1■□□□□ 0.01
HMGA1-204ENST00000401473 TRIM40Q6P9F5 258 aa15.1■□□□□ 0.01
HMGA1-204ENST00000401473 RNF165Q6ZSG1 346 aa15.1■□□□□ 0.01
HMGA1-204ENST00000401473 COX15Q7KZN9 410 aa15.1■□□□□ 0.01
HMGA1-204ENST00000401473 TMEM151BQ8IW70 566 aa15.1■□□□□ 0.01
HMGA1-204ENST00000401473 DDIASQ8IXT1 998 aa15.1■□□□□ 0.01
HMGA1-204ENST00000401473 PROKR1Q8TCW9 393 aa15.1■□□□□ 0.01
HMGA1-204ENST00000401473 CHTF18Q8WVB6 975 aa15.1■□□□□ 0.01
HMGA1-204ENST00000401473 NKD1Q969G9 470 aa15.1■□□□□ 0.01
HMGA1-204ENST00000401473 KCNC2Q96PR1 638 aa15.1■□□□□ 0.01
HMGA1-204ENST00000401473 CHST8Q9H2A9 424 aa15.1■□□□□ 0.01
HMGA1-204ENST00000401473 CCDC134Q9H6E4 229 aa15.1■□□□□ 0.01
HMGA1-204ENST00000401473 ZNF304Q9HCX3 659 aa15.1■□□□□ 0.01
HMGA1-204ENST00000401473 EPG5Q9HCE0 2579 aa15.1■□□□□ 0.01
HMGA1-204ENST00000401473 RDH16O75452 317 aa15.1■□□□□ 0.01
HMGA1-204ENST00000401473 EEDO75530 441 aaKnown RBP15.1■□□□□ 0.01
HMGA1-204ENST00000401473 ONECUT2O95948 504 aa15.1■□□□□ 0.01
HMGA1-204ENST00000401473 CHEK2O96017 543 aa15.1■□□□□ 0.01
HMGA1-204ENST00000401473 KLK3P07288 261 aaPredicted RBP15.1■□□□□ 0.01
HMGA1-204ENST00000401473 ATP5A1P25705 553 aaKnown RBP15.1■□□□□ 0.01
HMGA1-204ENST00000401473 FOXL2P58012 376 aa15.1■□□□□ 0.01
HMGA1-204ENST00000401473 RUNX2Q13950 521 aa15.1■□□□□ 0.01
HMGA1-204ENST00000401473 KIAA0040Q15053 153 aa15.1■□□□□ 0.01
HMGA1-204ENST00000401473 XKR7Q5GH72 579 aa15.1■□□□□ 0.01
HMGA1-204ENST00000401473 PRMT9Q6P2P2 845 aa15.1■□□□□ 0.01
HMGA1-204ENST00000401473 MAVSQ7Z434 540 aa15.1■□□□□ 0.01
HMGA1-204ENST00000401473 CRLF3Q8IUI8 442 aa15.1■□□□□ 0.01
HMGA1-204ENST00000401473 WDR75Q8IWA0 830 aaKnown RBP15.1■□□□□ 0.01
HMGA1-204ENST00000401473 METTL4Q8N3J2 472 aa15.1■□□□□ 0.01
HMGA1-204ENST00000401473 ACOT4Q8N9L9 421 aa15.1■□□□□ 0.01
HMGA1-204ENST00000401473 TBCDQ9BTW9 1192 aa15.1■□□□□ 0.01
HMGA1-204ENST00000401473 NUF2Q9BZD4 464 aa15.1■□□□□ 0.01
HMGA1-204ENST00000401473 GIMAP2Q9UG22 337 aa15.1■□□□□ 0.01
HMGA1-204ENST00000401473 H0YIG0 161 aa15.09■□□□□ 0.01
HMGA1-204ENST00000401473 TAF4O00268 1085 aa15.09■□□□□ 0.01
HMGA1-204ENST00000401473 HIST1H1TP22492 207 aaPredicted RBP15.09■□□□□ 0.01
HMGA1-204ENST00000401473 CERS1P27544 350 aa15.09■□□□□ 0.01
HMGA1-204ENST00000401473 SPDYAQ5MJ70 313 aa15.09■□□□□ 0.01
HMGA1-204ENST00000401473 VWA5B1Q5TIE3 1220 aa15.09■□□□□ 0.01
HMGA1-204ENST00000401473 NLGN4XQ8N0W4 816 aa15.09■□□□□ 0.01
HMGA1-204ENST00000401473 SRFBP1Q8NEF9 429 aaKnown RBP15.09■□□□□ 0.01
HMGA1-204ENST00000401473 NLGN4YQ8NFZ3 816 aaPredicted RBP15.09■□□□□ 0.01
HMGA1-204ENST00000401473 FGF11Q92914 225 aa15.09■□□□□ 0.01
HMGA1-204ENST00000401473 MR1Q95460 341 aa15.09■□□□□ 0.01
HMGA1-204ENST00000401473 C19orf60Q96EN9 201 aa15.09■□□□□ 0.01
HMGA1-204ENST00000401473 FAR2Q96K12 515 aa15.09■□□□□ 0.01
HMGA1-204ENST00000401473 DDX31Q9H8H2 851 aaKnown RBP15.09■□□□□ 0.01
HMGA1-204ENST00000401473 LSM1O15116 133 aaKnown RBP15.08■□□□□ 0.01
HMGA1-204ENST00000401473 POLR3GO15318 223 aaPredicted RBP15.08■□□□□ 0.01
HMGA1-204ENST00000401473 RAD1O60671 282 aa15.08■□□□□ 0.01
HMGA1-204ENST00000401473 EDF1O60869 148 aaKnown RBP15.08■□□□□ 0.01
HMGA1-204ENST00000401473 CNOT3O75175 753 aaKnown RBP15.08■□□□□ 0.01
HMGA1-204ENST00000401473 SEMA3DO95025 777 aa15.08■□□□□ 0.01
HMGA1-204ENST00000401473 KLK1P06870 262 aa15.08■□□□□ 0.01
HMGA1-204ENST00000401473 CD82P27701 267 aa15.08■□□□□ 0.01
HMGA1-204ENST00000401473 AVPR1BP47901 424 aa15.08■□□□□ 0.01
HMGA1-204ENST00000401473 RAP1GDS1P52306 607 aa15.08■□□□□ 0.01
HMGA1-204ENST00000401473 RAE1P78406 368 aaKnown RBP15.08■□□□□ 0.01
HMGA1-204ENST00000401473 AP5B1Q2VPB7 878 aa15.08■□□□□ 0.01
HMGA1-204ENST00000401473 RFTN2Q52LD8 501 aaPredicted RBP15.08■□□□□ 0.01
HMGA1-204ENST00000401473 FAM69BQ5VUD6 431 aa15.08■□□□□ 0.01
HMGA1-204ENST00000401473 COMMD6Q7Z4G1 85 aa15.08■□□□□ 0.01
HMGA1-204ENST00000401473 C1orf52Q8N6N3 182 aaKnown RBP15.08■□□□□ 0.01
HMGA1-204ENST00000401473 COL26A1Q96A83 441 aa15.08■□□□□ 0.01
HMGA1-204ENST00000401473 CENPKQ9BS16 269 aa15.08■□□□□ 0.01
HMGA1-204ENST00000401473 KCMF1Q9P0J7 381 aa15.08■□□□□ 0.01
HMGA1-204ENST00000401473 CDC14AQ9UNH5 594 aa15.08■□□□□ 0.01
HMGA1-204ENST00000401473 ATMQ13315 3056 aa15.08■□□□□ 0
HMGA1-204ENST00000401473 LOC101059948A0A1B0GTJ6 334 aa15.08■□□□□ 0
HMGA1-204ENST00000401473 NPIPB8E9PQR5 432 aa15.08■□□□□ 0
HMGA1-204ENST00000401473 SLC28A1O00337 649 aa15.08■□□□□ 0
HMGA1-204ENST00000401473 HDAC3O15379 428 aa15.08■□□□□ 0
HMGA1-204ENST00000401473 TMPRSS11DO60235 418 aa15.08■□□□□ 0
HMGA1-204ENST00000401473 SCELO95171 688 aa15.08■□□□□ 0
HMGA1-204ENST00000401473 CCNYL3P0C7X3 344 aa15.08■□□□□ 0
HMGA1-204ENST00000401473 F8A1P23610 371 aa15.08■□□□□ 0
HMGA1-204ENST00000401473 TPP2P29144 1249 aaPredicted RBP15.08■□□□□ 0
HMGA1-204ENST00000401473 SSR2P43308 183 aa15.08■□□□□ 0
HMGA1-204ENST00000401473 ARFIP1P53367 373 aa15.08■□□□□ 0
HMGA1-204ENST00000401473 MTTPP55157 894 aa15.08■□□□□ 0
HMGA1-204ENST00000401473 DSG2Q14126 1118 aa15.08■□□□□ 0
HMGA1-204ENST00000401473 MAP7Q14244 749 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms