RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 MAP1AP78559 2803 aaPredicted RBP13.56□□□□□ -0.24
VAMP1-203ENST00000400911 FAM166BA8MTA8 275 aa13.55□□□□□ -0.24
VAMP1-203ENST00000400911 HIST1H2AGP0C0S8 130 aaPredicted RBP13.55□□□□□ -0.24
VAMP1-203ENST00000400911 HIST1H2ADP20671 130 aa13.55□□□□□ -0.24
VAMP1-203ENST00000400911 ACVR2AP27037 513 aa13.55□□□□□ -0.24
VAMP1-203ENST00000400911 SCTRP47872 440 aa13.55□□□□□ -0.24
VAMP1-203ENST00000400911 SSR4P51571 173 aa13.55□□□□□ -0.24
VAMP1-203ENST00000400911 DLX5P56178 289 aa13.55□□□□□ -0.24
VAMP1-203ENST00000400911 PLGLB1Q02325 96 aa13.55□□□□□ -0.24
VAMP1-203ENST00000400911 FOLH1Q04609 750 aa13.55□□□□□ -0.24
VAMP1-203ENST00000400911 DHX9Q08211 1270 aaKnown RBP13.55□□□□□ -0.24
VAMP1-203ENST00000400911 SP140Q13342 867 aa13.55□□□□□ -0.24
VAMP1-203ENST00000400911 HSP90AA5PQ58FG0 334 aa13.55□□□□□ -0.24
VAMP1-203ENST00000400911 XKR6Q5GH73 641 aa13.55□□□□□ -0.24
VAMP1-203ENST00000400911 DUPD1Q68J44 220 aa13.55□□□□□ -0.24
VAMP1-203ENST00000400911 LRRC8EQ6NSJ5 796 aa13.55□□□□□ -0.24
VAMP1-203ENST00000400911 UGT3A1Q6NUS8 523 aa13.55□□□□□ -0.24
VAMP1-203ENST00000400911 MYO1HQ8N1T3 1032 aa13.55□□□□□ -0.24
VAMP1-203ENST00000400911 ANKRD53Q8N9V6 530 aa13.55□□□□□ -0.24
VAMP1-203ENST00000400911 PSD4Q8NDX1 1056 aa13.55□□□□□ -0.24
VAMP1-203ENST00000400911 OR56A3Q8NH54 315 aa13.55□□□□□ -0.24
VAMP1-203ENST00000400911 CALML6Q8TD86 181 aa13.55□□□□□ -0.24
VAMP1-203ENST00000400911 NINJ1Q92982 152 aa13.55□□□□□ -0.24
VAMP1-203ENST00000400911 LINGO1Q96FE5 620 aa13.55□□□□□ -0.24
VAMP1-203ENST00000400911 HIST1H2AHQ96KK5 128 aa13.55□□□□□ -0.24
VAMP1-203ENST00000400911 HIST1H2AJQ99878 128 aa13.55□□□□□ -0.24
VAMP1-203ENST00000400911 TTYH2Q9BSA4 534 aa13.55□□□□□ -0.24
VAMP1-203ENST00000400911 H2AFJQ9BTM1 129 aa13.55□□□□□ -0.24
VAMP1-203ENST00000400911 SLC6A16Q9GZN6 736 aa13.55□□□□□ -0.24
VAMP1-203ENST00000400911 GSX1Q9H4S2 264 aaPredicted RBP13.55□□□□□ -0.24
VAMP1-203ENST00000400911 LIN28AQ9H9Z2 209 aaKnown RBP13.55□□□□□ -0.24
VAMP1-203ENST00000400911 CLK4Q9HAZ1 481 aaKnown RBP13.55□□□□□ -0.24
VAMP1-203ENST00000400911 IARS2Q9NSE4 1012 aaKnown RBP13.55□□□□□ -0.24
VAMP1-203ENST00000400911 ARL15Q9NXU5 204 aa13.55□□□□□ -0.24
VAMP1-203ENST00000400911 YARS2Q9Y2Z4 477 aaKnown RBP13.55□□□□□ -0.24
VAMP1-203ENST00000400911 SPG11Q96JI7 2443 aa13.55□□□□□ -0.24
VAMP1-203ENST00000400911 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.54□□□□□ -0.24
VAMP1-203ENST00000400911 A0A0G2JMM0 328 aa13.54□□□□□ -0.24
VAMP1-203ENST00000400911 A0A1W2PPB8 328 aa13.54□□□□□ -0.24
VAMP1-203ENST00000400911 A0A1W2PRS3 328 aa13.54□□□□□ -0.24
VAMP1-203ENST00000400911 KIR3DP1A8MWS1 328 aa13.54□□□□□ -0.24
VAMP1-203ENST00000400911 G3V3Y1 287 aa13.54□□□□□ -0.24
VAMP1-203ENST00000400911 PRKNO60260 465 aaPredicted RBP13.54□□□□□ -0.24
VAMP1-203ENST00000400911 CTAG2O75638 210 aa13.54□□□□□ -0.24
VAMP1-203ENST00000400911 OR2J2O76002 312 aa13.54□□□□□ -0.24
VAMP1-203ENST00000400911 SMIM10L1P0DMW3 83 aa13.54□□□□□ -0.24
VAMP1-203ENST00000400911 GLI4P10075 376 aa13.54□□□□□ -0.24
VAMP1-203ENST00000400911 MLNP12872 115 aa13.54□□□□□ -0.24
VAMP1-203ENST00000400911 PPP2R1BP30154 601 aa13.54□□□□□ -0.24
VAMP1-203ENST00000400911 AHRP35869 848 aa13.54□□□□□ -0.24
VAMP1-203ENST00000400911 CDKN2DP55273 166 aa13.54□□□□□ -0.24
VAMP1-203ENST00000400911 PPP2R2AP63151 447 aa13.54□□□□□ -0.24
VAMP1-203ENST00000400911 SNTB1Q13884 538 aaKnown RBP13.54□□□□□ -0.24
VAMP1-203ENST00000400911 CSHL1Q14406 222 aa13.54□□□□□ -0.24
VAMP1-203ENST00000400911 HECTD2Q5U5R9 776 aa13.54□□□□□ -0.24
VAMP1-203ENST00000400911 ZNF585AQ6P3V2 769 aa13.54□□□□□ -0.24
VAMP1-203ENST00000400911 IL20RBQ6UXL0 311 aa13.54□□□□□ -0.24
VAMP1-203ENST00000400911 LIX1LQ8IVB5 337 aa13.54□□□□□ -0.24
VAMP1-203ENST00000400911 CA13Q8N1Q1 262 aa13.54□□□□□ -0.24
VAMP1-203ENST00000400911 AGGF1Q8N302 714 aaeCLIP13.54□□□□□ -0.24
VAMP1-203ENST00000400911 OR2M7Q8NG81 312 aa13.54□□□□□ -0.24
VAMP1-203ENST00000400911 MAIP1Q8WWC4 291 aa13.54□□□□□ -0.24
VAMP1-203ENST00000400911 SLC5A11Q8WWX8 675 aa13.54□□□□□ -0.24
VAMP1-203ENST00000400911 SREK1Q8WXA9 508 aaKnown RBP13.54□□□□□ -0.24
VAMP1-203ENST00000400911 NEIL2Q969S2 332 aa13.54□□□□□ -0.24
VAMP1-203ENST00000400911 NCLNQ969V3 563 aa13.54□□□□□ -0.24
VAMP1-203ENST00000400911 SMIM10Q96HG1 83 aa13.54□□□□□ -0.24
VAMP1-203ENST00000400911 PDLIM2Q96JY6 352 aa13.54□□□□□ -0.24
VAMP1-203ENST00000400911 TSNARE1Q96NA8 513 aa13.54□□□□□ -0.24
VAMP1-203ENST00000400911 SERPINB12Q96P63 405 aa13.54□□□□□ -0.24
VAMP1-203ENST00000400911 ZDHHC11Q9H8X9 412 aa13.54□□□□□ -0.24
VAMP1-203ENST00000400911 TAS2R13Q9NYV9 303 aa13.54□□□□□ -0.24
VAMP1-203ENST00000400911 L3MBTL1Q9Y468 752 aa13.54□□□□□ -0.24
VAMP1-203ENST00000400911 MAD1L1Q9Y6D9 718 aa13.54□□□□□ -0.24
VAMP1-203ENST00000400911 SCN2AQ99250 2005 aa13.54□□□□□ -0.24
VAMP1-203ENST00000400911 CACNA1CQ13936 2221 aa13.54□□□□□ -0.24
VAMP1-203ENST00000400911 A0A0G2JNJ9 132 aa13.53□□□□□ -0.24
VAMP1-203ENST00000400911 URADA6NGE7 173 aa13.53□□□□□ -0.24
VAMP1-203ENST00000400911 TMEM200CA6NKL6 621 aa13.53□□□□□ -0.24
VAMP1-203ENST00000400911 A8MVJ9 347 aa13.53□□□□□ -0.24
VAMP1-203ENST00000400911 C4orf51C9J302 202 aa13.53□□□□□ -0.24
VAMP1-203ENST00000400911 ZFAND5O76080 213 aa13.53□□□□□ -0.24
VAMP1-203ENST00000400911 OR6B1O95007 311 aa13.53□□□□□ -0.24
VAMP1-203ENST00000400911 ZFP36L2P47974 494 aaKnown RBP13.53□□□□□ -0.24
VAMP1-203ENST00000400911 GPR143P51810 404 aa13.53□□□□□ -0.24
VAMP1-203ENST00000400911 RBBP5Q15291 538 aaKnown RBP13.53□□□□□ -0.24
VAMP1-203ENST00000400911 TERF2Q15554 542 aa13.53□□□□□ -0.24
VAMP1-203ENST00000400911 CEBPEQ15744 281 aa13.53□□□□□ -0.24
VAMP1-203ENST00000400911 RTL6Q6ICC9 239 aa13.53□□□□□ -0.24
VAMP1-203ENST00000400911 ARSKQ6UWY0 536 aa13.53□□□□□ -0.24
VAMP1-203ENST00000400911 SLC22A16Q86VW1 577 aa13.53□□□□□ -0.24
VAMP1-203ENST00000400911 LMNTD2Q8IXW0 634 aa13.53□□□□□ -0.24
VAMP1-203ENST00000400911 ZZZ3Q8IYH5 903 aa13.53□□□□□ -0.24
VAMP1-203ENST00000400911 MCUQ8NE86 351 aa13.53□□□□□ -0.24
VAMP1-203ENST00000400911 MYRIPQ8NFW9 859 aa13.53□□□□□ -0.24
VAMP1-203ENST00000400911 CREB3L4Q8TEY5 395 aa13.53□□□□□ -0.24
VAMP1-203ENST00000400911 VMP1Q96GC9 406 aa13.53□□□□□ -0.24
VAMP1-203ENST00000400911 PWWP2AQ96N64 755 aa13.53□□□□□ -0.24
VAMP1-203ENST00000400911 SMC6Q96SB8 1091 aa13.53□□□□□ -0.24
VAMP1-203ENST00000400911 CCDC77Q9BR77 488 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms