RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 SERPINI2O75830 405 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 CCNB2O95067 398 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 COX7A2P14406 83 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 ZMYND11Q15326 602 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 SLC35F1Q5T1Q4 408 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 ZNF767PQ75MW2 155 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 RNF130Q86XS8 419 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 C1GALT1C1Q96EU7 318 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 PITX2Q99697 317 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 FBXO44Q9H4M3 255 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 YARS2Q9Y2Z4 477 aaKnown RBP16.4■□□□□ 0.22
PTPRA-205ENST00000399903 VWA8A3KMH1 1905 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 MRPS14O60783 128 aaKnown RBP16.4■□□□□ 0.22
PTPRA-205ENST00000399903 KCNK5O95279 499 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 PDYNP01213 254 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 SELPP16109 830 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 ATF6P18850 670 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 MRPL19P49406 292 aaKnown RBP16.4■□□□□ 0.22
PTPRA-205ENST00000399903 CDC42P60953 191 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.4■□□□□ 0.227e-7■■■■□ 22.4
PTPRA-205ENST00000399903 SLC51BQ86UW2 128 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 BBS7Q8IWZ6 715 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 TAGAPQ8N103 731 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 GPR150Q8NGU9 434 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 WBP2Q969T9 261 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 CRELD1Q96HD1 420 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 SPATA9Q9BWV2 254 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 TLR8Q9NR97 1041 aaKnown RBP16.4■□□□□ 0.22
PTPRA-205ENST00000399903 CLN6Q9NWW5 311 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 NYNRINQ9P2P1 1898 aaKnown RBP16.4■□□□□ 0.22
PTPRA-205ENST00000399903 MAGEB17A8MXT2 336 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 ARHGEF15O94989 841 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 ALDH1A1P00352 501 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 EPB42P16452 691 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 SSTR2P30874 369 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 CRATP43155 626 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 GZMMP51124 257 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 SGSHP51688 502 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 ITGA1P56199 1179 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 DBPQ10586 325 aaPredicted RBP16.4■□□□□ 0.22
PTPRA-205ENST00000399903 TWF1Q12792 350 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 MAB21L1Q13394 359 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 FGFBP1Q14512 234 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 LARS2Q15031 903 aaKnown RBP16.4■□□□□ 0.22
PTPRA-205ENST00000399903 SNAPC1Q16533 368 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 IQCCQ4KMZ1 466 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 SPOUT1Q5T280 376 aaKnown RBP16.4■□□□□ 0.22
PTPRA-205ENST00000399903 FAHD1Q6P587 224 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 SYT12Q8IV01 421 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 NELL1Q92832 810 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 ACPTQ9BZG2 426 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 TMEM161AQ9NX61 479 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 MYO10Q9HD67 2058 aa16.39■□□□□ 0.22
PTPRA-205ENST00000399903 MYO16Q9Y6X6 1858 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 ISM1B1AKI9 464 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 H3BN98 237 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 PLA2G10O15496 165 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 PRLP01236 227 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 M6PRP20645 277 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 ALAS2P22557 587 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 SLC6A4P31645 630 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 CNR2P34972 360 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 ETV6P41212 452 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 UGT8Q16880 541 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 LEXMQ3ZCV2 418 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 ANKRD54Q6NXT1 300 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 LINGO4Q6UY18 593 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 ASB18Q6ZVZ8 466 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 ATCAYQ86WG3 371 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 Q8N402 240 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 SYT14Q8NB59 555 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 TOR1AIP2Q8NFQ8 470 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 MAGEB10Q96LZ2 347 aaPredicted RBP16.39■□□□□ 0.21
PTPRA-205ENST00000399903 DEFB118Q96PH6 123 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 SMAD5Q99717 465 aaKnown RBP16.39■□□□□ 0.21
PTPRA-205ENST00000399903 TCF25Q9BQ70 676 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 C3orf14Q9HBI5 128 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 CHD7Q9P2D1 2997 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 GALTP07902 379 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 ENPP1P22413 925 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 RGRP47804 291 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 SOX9P48436 509 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 ADAMTSL2Q86TH1 951 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 POF1BQ8WVV4 589 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 RIT1Q92963 219 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 APIPQ96GX9 242 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 OPALINQ96PE5 141 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 DPCDQ9BVM2 203 aaPredicted RBP16.39■□□□□ 0.21
PTPRA-205ENST00000399903 HHATLQ9HCP6 504 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 TRAPPC4Q9Y296 219 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 NLRC5Q86WI3 1866 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 FABP7O15540 132 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 GSTM1P09488 218 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 TTPAP49638 278 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 AP2S1P53680 142 aaPredicted RBP16.39■□□□□ 0.21
PTPRA-205ENST00000399903 SNTA1Q13424 505 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 LRRC32Q14392 662 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 TYW3Q6IPR3 259 aaKnown RBP16.39■□□□□ 0.21
PTPRA-205ENST00000399903 HDHD2Q9H0R4 259 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 FZD4Q9ULV1 537 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms