RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 A0A1W2PQ72 361 aa13.27□□□□□ -0.29
HLA-DQB1-202ENST00000399079 A8MT66 165 aa13.27□□□□□ -0.29
HLA-DQB1-202ENST00000399079 STX16-NPEPL1H3BU86 382 aa13.27□□□□□ -0.29
HLA-DQB1-202ENST00000399079 SAP18O00422 153 aaKnown RBP13.27□□□□□ -0.29
HLA-DQB1-202ENST00000399079 RTCAO00442 366 aaKnown RBP13.27□□□□□ -0.29
HLA-DQB1-202ENST00000399079 PPP6CO00743 305 aa13.27□□□□□ -0.29
HLA-DQB1-202ENST00000399079 OR7A17O14581 309 aa13.27□□□□□ -0.29
HLA-DQB1-202ENST00000399079 STX16O14662 325 aa13.27□□□□□ -0.29
HLA-DQB1-202ENST00000399079 SEC24DO94855 1032 aaPredicted RBP13.27□□□□□ -0.29
HLA-DQB1-202ENST00000399079 PIK3CGP48736 1102 aa13.27□□□□□ -0.29
HLA-DQB1-202ENST00000399079 NSDHLQ15738 373 aa13.27□□□□□ -0.29
HLA-DQB1-202ENST00000399079 CPSF6Q16630 551 aaKnown RBP eCLIP13.27□□□□□ -0.29
HLA-DQB1-202ENST00000399079 VWA5B1Q5TIE3 1220 aa13.27□□□□□ -0.29
HLA-DQB1-202ENST00000399079 LIPJQ5W064 366 aa13.27□□□□□ -0.29
HLA-DQB1-202ENST00000399079 NIPAL1Q6NVV3 410 aa13.27□□□□□ -0.29
HLA-DQB1-202ENST00000399079 TRIM40Q6P9F5 258 aa13.27□□□□□ -0.29
HLA-DQB1-202ENST00000399079 ABHD17CQ6PCB6 329 aa13.27□□□□□ -0.29
HLA-DQB1-202ENST00000399079 ATG14Q6ZNE5 492 aa13.27□□□□□ -0.29
HLA-DQB1-202ENST00000399079 UBE3DQ7Z6J8 389 aa13.27□□□□□ -0.29
HLA-DQB1-202ENST00000399079 HUS1BQ8NHY5 278 aa13.27□□□□□ -0.29
HLA-DQB1-202ENST00000399079 UBE2E3Q969T4 207 aa13.27□□□□□ -0.29
HLA-DQB1-202ENST00000399079 QRFPRQ96P65 431 aa13.27□□□□□ -0.29
HLA-DQB1-202ENST00000399079 MS4A8Q9BY19 250 aa13.27□□□□□ -0.29
HLA-DQB1-202ENST00000399079 LHPPQ9H008 270 aa13.27□□□□□ -0.29
HLA-DQB1-202ENST00000399079 ZNF700Q9H0M5 742 aa13.27□□□□□ -0.29
HLA-DQB1-202ENST00000399079 EPN3Q9H201 632 aa13.27□□□□□ -0.29
HLA-DQB1-202ENST00000399079 OR51B5Q9H339 312 aa13.27□□□□□ -0.29
HLA-DQB1-202ENST00000399079 SEMA4BQ9NPR2 832 aaPredicted RBP13.27□□□□□ -0.29
HLA-DQB1-202ENST00000399079 DOCK10Q96BY6 2186 aa13.27□□□□□ -0.29
HLA-DQB1-202ENST00000399079 HELZ2Q9BYK8 2649 aaKnown RBP13.26□□□□□ -0.29
HLA-DQB1-202ENST00000399079 A0A1B0GTL3 188 aa13.26□□□□□ -0.29
HLA-DQB1-202ENST00000399079 PRR35P0CG20 571 aa13.26□□□□□ -0.29
HLA-DQB1-202ENST00000399079 RNH1P13489 461 aaKnown RBP13.26□□□□□ -0.29
HLA-DQB1-202ENST00000399079 TSPAN8P19075 237 aa13.26□□□□□ -0.29
HLA-DQB1-202ENST00000399079 MAOAP21397 527 aa13.26□□□□□ -0.29
HLA-DQB1-202ENST00000399079 IL10P22301 178 aa13.26□□□□□ -0.29
HLA-DQB1-202ENST00000399079 CERS1P27544 350 aa13.26□□□□□ -0.29
HLA-DQB1-202ENST00000399079 ARL1P40616 181 aaPredicted RBP13.26□□□□□ -0.29
HLA-DQB1-202ENST00000399079 NEK2P51955 445 aa13.26□□□□□ -0.29
HLA-DQB1-202ENST00000399079 CDH13P55290 713 aa13.26□□□□□ -0.29
HLA-DQB1-202ENST00000399079 TLE1Q04724 770 aa13.26□□□□□ -0.29
HLA-DQB1-202ENST00000399079 FAM219BQ5XKK7 198 aa13.26□□□□□ -0.29
HLA-DQB1-202ENST00000399079 METTL2BQ6P1Q9 378 aaKnown RBP13.26□□□□□ -0.29
HLA-DQB1-202ENST00000399079 WDR93Q6P2C0 686 aa13.26□□□□□ -0.29
HLA-DQB1-202ENST00000399079 SH2D5Q6ZV89 423 aa13.26□□□□□ -0.29
HLA-DQB1-202ENST00000399079 CPEB2Q7Z5Q1 589 aaKnown RBP13.26□□□□□ -0.29
HLA-DQB1-202ENST00000399079 ANKRD37Q7Z713 158 aa13.26□□□□□ -0.29
HLA-DQB1-202ENST00000399079 RBMXL3Q8N7X1 1067 aaKnown RBP13.26□□□□□ -0.29
HLA-DQB1-202ENST00000399079 PLPP5Q8NEB5 264 aa13.26□□□□□ -0.29
HLA-DQB1-202ENST00000399079 ACMSDQ8TDX5 336 aa13.26□□□□□ -0.29
HLA-DQB1-202ENST00000399079 AENQ8WTP8 325 aaKnown RBP13.26□□□□□ -0.29
HLA-DQB1-202ENST00000399079 ATP6V1E2Q96A05 226 aa13.26□□□□□ -0.29
HLA-DQB1-202ENST00000399079 PRDM7Q9NQW5 492 aa13.26□□□□□ -0.29
HLA-DQB1-202ENST00000399079 LUZP4Q9P127 313 aa13.26□□□□□ -0.29
HLA-DQB1-202ENST00000399079 TMCO1Q9UM00 188 aa13.26□□□□□ -0.29
HLA-DQB1-202ENST00000399079 PCDHGB7Q9Y5F8 929 aa13.26□□□□□ -0.29
HLA-DQB1-202ENST00000399079 MAGEB17A8MXT2 336 aa13.25□□□□□ -0.29
HLA-DQB1-202ENST00000399079 H0YIV9 168 aa13.25□□□□□ -0.29
HLA-DQB1-202ENST00000399079 PSMD12O00232 456 aaPredicted RBP13.25□□□□□ -0.29
HLA-DQB1-202ENST00000399079 PCDH17O14917 1159 aa13.25□□□□□ -0.29
HLA-DQB1-202ENST00000399079 B3GALT2O43825 422 aa13.25□□□□□ -0.29
HLA-DQB1-202ENST00000399079 DLX3O60479 287 aa13.25□□□□□ -0.29
HLA-DQB1-202ENST00000399079 PRMT3O60678 531 aa13.25□□□□□ -0.29
HLA-DQB1-202ENST00000399079 CLDN9O95484 217 aa13.25□□□□□ -0.29
HLA-DQB1-202ENST00000399079 ALPPP05187 535 aa13.25□□□□□ -0.29
HLA-DQB1-202ENST00000399079 RPS17P08708 135 aaKnown RBP13.25□□□□□ -0.29
HLA-DQB1-202ENST00000399079 KRT15P19012 456 aa13.25□□□□□ -0.29
HLA-DQB1-202ENST00000399079 JAK1P23458 1154 aa13.25□□□□□ -0.29
HLA-DQB1-202ENST00000399079 CASRP41180 1078 aa13.25□□□□□ -0.29
HLA-DQB1-202ENST00000399079 CCNG1P51959 295 aa13.25□□□□□ -0.29
HLA-DQB1-202ENST00000399079 MLLT10P55197 1068 aa13.25□□□□□ -0.29
HLA-DQB1-202ENST00000399079 TRAF3Q13114 568 aa13.25□□□□□ -0.29
HLA-DQB1-202ENST00000399079 ZRSR2Q15696 482 aaKnown RBP13.25□□□□□ -0.29
HLA-DQB1-202ENST00000399079 AGAP7PQ5VUJ5 663 aa13.25□□□□□ -0.29
HLA-DQB1-202ENST00000399079 ZNF793Q6ZN11 406 aa13.25□□□□□ -0.29
HLA-DQB1-202ENST00000399079 TDRPQ86YL5 185 aa13.25□□□□□ -0.29
HLA-DQB1-202ENST00000399079 KBTBD2Q8IY47 623 aa13.25□□□□□ -0.29
HLA-DQB1-202ENST00000399079 L3MBTL4Q8NA19 623 aa13.25□□□□□ -0.29
HLA-DQB1-202ENST00000399079 TMEM52Q8NDY8 209 aa13.25□□□□□ -0.29
HLA-DQB1-202ENST00000399079 PSMF1Q92530 271 aa13.25□□□□□ -0.29
HLA-DQB1-202ENST00000399079 MTFMTQ96DP5 389 aaKnown RBP13.25□□□□□ -0.29
HLA-DQB1-202ENST00000399079 IMMP1LQ96LU5 166 aa13.25□□□□□ -0.29
HLA-DQB1-202ENST00000399079 PTCHD1Q96NR3 888 aa13.25□□□□□ -0.29
HLA-DQB1-202ENST00000399079 AGAP4Q96P64 663 aa13.25□□□□□ -0.29
HLA-DQB1-202ENST00000399079 WDR77Q9BQA1 342 aaPredicted RBP13.25□□□□□ -0.29
HLA-DQB1-202ENST00000399079 SORBS1Q9BX66 1292 aaKnown RBP13.25□□□□□ -0.29
HLA-DQB1-202ENST00000399079 PARD6BQ9BYG5 372 aa13.25□□□□□ -0.29
HLA-DQB1-202ENST00000399079 CLK4Q9HAZ1 481 aaKnown RBP13.25□□□□□ -0.29
HLA-DQB1-202ENST00000399079 RIC8BQ9NVN3 520 aa13.25□□□□□ -0.29
HLA-DQB1-202ENST00000399079 PCDHGA11Q9Y5H2 935 aa13.25□□□□□ -0.29
HLA-DQB1-202ENST00000399079 CSAG2Q9Y5P2 127 aa13.25□□□□□ -0.29
HLA-DQB1-202ENST00000399079 PRRC2CQ9Y520 2896 aaKnown RBP13.24□□□□□ -0.29
HLA-DQB1-202ENST00000399079 TLDC2A0PJX2 215 aa13.24□□□□□ -0.29
HLA-DQB1-202ENST00000399079 UGDHO60701 494 aa13.24□□□□□ -0.29
HLA-DQB1-202ENST00000399079 DPM1O60762 260 aa13.24□□□□□ -0.29
HLA-DQB1-202ENST00000399079 CYC1P08574 325 aa13.24□□□□□ -0.29
HLA-DQB1-202ENST00000399079 ITGAMP11215 1152 aa13.24□□□□□ -0.29
HLA-DQB1-202ENST00000399079 HPDP32754 393 aaPredicted RBP13.24□□□□□ -0.29
HLA-DQB1-202ENST00000399079 HNRNPFP52597 415 aaKnown RBP13.24□□□□□ -0.29
HLA-DQB1-202ENST00000399079 MTTPP55157 894 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms