RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 FAM72AQ5TYM5 149 aa8.35□□□□□ -1.07
CTNND1-205ENST00000399050 EIF5AL1Q6IS14 154 aaKnown RBP8.35□□□□□ -1.07
CTNND1-205ENST00000399050 FAM72DQ6L9T8 149 aa8.35□□□□□ -1.07
CTNND1-205ENST00000399050 ANKRD54Q6NXT1 300 aa8.35□□□□□ -1.07
CTNND1-205ENST00000399050 CYS1Q717R9 158 aa8.35□□□□□ -1.07
CTNND1-205ENST00000399050 FAM72BQ86X60 149 aa8.35□□□□□ -1.07
CTNND1-205ENST00000399050 TMEM151AQ8N4L1 468 aa8.35□□□□□ -1.07
CTNND1-205ENST00000399050 NXPE2Q96DL1 559 aa8.35□□□□□ -1.07
CTNND1-205ENST00000399050 CCM2Q9BSQ5 444 aa8.35□□□□□ -1.07
CTNND1-205ENST00000399050 PLEKHA6Q9Y2H5 1048 aa8.35□□□□□ -1.07
CTNND1-205ENST00000399050 STYXL1Q9Y6J8 313 aa8.35□□□□□ -1.07
CTNND1-205ENST00000399050 CDH10Q9Y6N8 788 aa8.35□□□□□ -1.07
CTNND1-205ENST00000399050 MYH1P12882 1939 aa8.35□□□□□ -1.07
CTNND1-205ENST00000399050 MYH4Q9Y623 1939 aa8.35□□□□□ -1.07
CTNND1-205ENST00000399050 GRID2O43424 1007 aa8.35□□□□□ -1.07
CTNND1-205ENST00000399050 PROM1O43490 865 aa8.35□□□□□ -1.07
CTNND1-205ENST00000399050 GDI2P50395 445 aaKnown RBP8.35□□□□□ -1.07
CTNND1-205ENST00000399050 HNRNPFP52597 415 aaKnown RBP8.35□□□□□ -1.07
CTNND1-205ENST00000399050 BTN3A2P78410 334 aa8.35□□□□□ -1.07
CTNND1-205ENST00000399050 ABRAXAS2Q15018 415 aa8.35□□□□□ -1.07
CTNND1-205ENST00000399050 OR52E4Q8NGH9 312 aa8.35□□□□□ -1.07
CTNND1-205ENST00000399050 RHEBL1Q8TAI7 183 aa8.35□□□□□ -1.07
CTNND1-205ENST00000399050 FRS2Q8WU20 508 aa8.35□□□□□ -1.07
CTNND1-205ENST00000399050 ASB15Q8WXK1 588 aa8.35□□□□□ -1.07
CTNND1-205ENST00000399050 RELTQ969Z4 430 aa8.35□□□□□ -1.07
CTNND1-205ENST00000399050 FLRT2O43155 660 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 ATE1O95260 518 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 MRPL3P09001 348 aaKnown RBP8.34□□□□□ -1.07
CTNND1-205ENST00000399050 ZNF20P17024 532 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 PRKACBP22694 351 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 ETV4P43268 484 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 RIPPLY1Q0D2K3 151 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 PON2Q15165 354 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 CARD16Q5EG05 197 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.34□□□□□ -1.07
CTNND1-205ENST00000399050 REEP3Q6NUK4 255 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 PSRC1Q6PGN9 363 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-205ENST00000399050 OR2L2Q8NH16 312 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 ZFP90Q8TF47 636 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 TCEAL4Q96EI5 215 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 HSPA12BQ96MM6 686 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 CD180Q99467 661 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 A0A1B0GVT2 93 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 FGF19O95750 216 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 CSNK2A2P19784 350 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-205ENST00000399050 CELP19835 753 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 IL12BP29460 328 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 AFF1P51825 1210 aaKnown RBP8.34□□□□□ -1.07
CTNND1-205ENST00000399050 ATXN7L3Q14CW9 347 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-205ENST00000399050 SPHARQ15513 63 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 OR4D1Q15615 310 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 VMACQ2NL98 169 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 FAAH2Q6GMR7 532 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 RGL4Q8IZJ4 473 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 CLDN19Q8N6F1 224 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 PSD4Q8NDX1 1056 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 OR4K1Q8NGD4 311 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 RPLP0P6Q8NHW5 317 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 LCN9Q8WX39 176 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 MRGPRX2Q96LB1 330 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 HYLS1Q96M11 299 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 TSGA13Q96PP4 275 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 RIOK2Q9BVS4 552 aaKnown RBP8.34□□□□□ -1.07
CTNND1-205ENST00000399050 NANSQ9NR45 359 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 TMEM248Q9NWD8 314 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 DISC1C4P0D8 188 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 CLDN4O14493 209 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 SCAMP1O15126 338 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 PTNP21246 168 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 HSD3B2P26439 372 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 BMP8BP34820 402 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 PPIGQ13427 754 aaKnown RBP eCLIP8.34□□□□□ -1.071e-7■□□□□ 10.9
CTNND1-205ENST00000399050 RHEBQ15382 184 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 NOXRED1Q6NXP6 359 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 ZNF767PQ75MW2 155 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 BMP8AQ7Z5Y6 402 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 SAMD14Q8IZD0 417 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-205ENST00000399050 POGLUT1Q8NBL1 392 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 OR10T2Q8NGX3 314 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 FANK1Q8TC84 345 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 RBM18Q96H35 190 aaKnown RBP8.34□□□□□ -1.07
CTNND1-205ENST00000399050 ZNF597Q96LX8 424 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 SCGB3A2Q96PL1 93 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 SORT1Q99523 831 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 TSNAXQ99598 290 aaKnown RBP8.34□□□□□ -1.07
CTNND1-205ENST00000399050 MMP28Q9H239 520 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 SUV39H2Q9H5I1 410 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 ADAP2Q9NPF8 381 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 TMEM181Q9P2C4 612 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 KDELR3O43731 214 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 RGS9O75916 674 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-205ENST00000399050 PGDP52209 483 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 ARFRP1Q13795 201 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 ODF4Q2M2E3 257 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 MS4A13Q5J8X5 152 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 SLC35F1Q5T1Q4 408 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 TMEM135Q86UB9 458 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 FAM217AQ8IXS0 508 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 ZDHHC14Q8IZN3 488 aa8.34□□□□□ -1.07
CTNND1-205ENST00000399050 TTLQ8NG68 377 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms