RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 A0A1W2PRQ8 180 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 CHP2O43745 196 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 IFI30P13284 250 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 KCNC1P48547 511 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 PGGT1BP53609 377 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 SNU13P55769 128 aaKnown RBP10.95□□□□□ -0.66
TTC28-201ENST00000397906 PLEKHS1Q5SXH7 462 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 BICRALQ6AI39 1079 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 FAM180BQ6P0A1 224 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 ARL9Q6T311 187 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 MAMDC4Q6UXC1 1216 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 NRROSQ86YC3 692 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 TRAM1L1Q8N609 369 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 LINC00597Q9H2U6 94 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 ZNF670-ZNF695F2Z2N8 137 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 BPNT1O95861 308 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 NUDT6P53370 316 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 ZNF763Q0D2J5 394 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 GLIS1Q8NBF1 620 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 CCDC120Q96HB5 630 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 GMLQ99445 158 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 POLDIP3Q9BY77 421 aaKnown RBP10.95□□□□□ -0.66
TTC28-201ENST00000397906 RAB26Q9ULW5 256 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 PRKD3O94806 890 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 SLC35G1Q2M3R5 365 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 RNF111Q6ZNA4 994 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 WDR12Q9GZL7 423 aaKnown RBP10.94□□□□□ -0.66
TTC28-201ENST00000397906 STARD5Q9NSY2 213 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 ASB6Q9NWX5 421 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 M0QX08 132 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 SPARCP09486 303 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 PRDX6P30041 224 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 SLC9A3P48764 834 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 OR6N2Q8NGY6 317 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 HSH2DQ96JZ2 352 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 PCDHGA2Q9Y5H1 932 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 ACTL7AQ9Y615 435 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 PDYNP01213 254 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 IRF5Q13568 498 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 NFE2L1Q14494 772 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 TIGD6Q17RP2 521 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 ZNF283Q8N7M2 679 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 NINJ1Q92982 152 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 SLC29A3Q9BZD2 475 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 MAGEE1Q9HCI5 957 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 CHD4Q14839 1912 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 M0R2N6 131 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 EI24O14681 340 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 ARPC2O15144 300 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 C17orf99Q6UX52 265 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 TDRPQ86YL5 185 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 MED28Q9H204 178 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 NAV1Q8NEY1 1877 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 PLATP00750 562 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 EN2P19622 333 aaPredicted RBP10.94□□□□□ -0.66
TTC28-201ENST00000397906 TMCO6Q96DC7 493 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 METTL8Q9H825 291 aaKnown RBP10.94□□□□□ -0.66
TTC28-201ENST00000397906 TAS2R7Q9NYW3 318 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 DNMT3AQ9Y6K1 912 aaPredicted RBP10.94□□□□□ -0.66
TTC28-201ENST00000397906 PDLIM1O00151 329 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 RPLP0P05388 317 aaKnown RBP10.94□□□□□ -0.66
TTC28-201ENST00000397906 SSX6Q7RTT6 188 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 KRTCAP2Q8N6L1 136 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 UCK2Q9BZX2 261 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 TPT1P8Q9HAU6 139 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 SQORQ9Y6N5 450 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 P04436 131 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 DNAJA1P31689 397 aaKnown RBP10.94□□□□□ -0.66
TTC28-201ENST00000397906 SOX9P48436 509 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 SMSP52788 366 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 RPL26P61254 145 aaKnown RBP10.94□□□□□ -0.66
TTC28-201ENST00000397906 C2CD4AQ8NCU7 369 aaPredicted RBP10.94□□□□□ -0.66
TTC28-201ENST00000397906 RPL26L1Q9UNX3 145 aaKnown RBP10.94□□□□□ -0.66
TTC28-201ENST00000397906 MAN2A2P49641 1150 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 AKAP14Q86UN6 197 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 DIO2Q92813 273 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 NXPE2Q96DL1 559 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 C8orf4Q9NR00 106 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 RPL36Q9Y3U8 105 aaKnown RBP10.94□□□□□ -0.66
TTC28-201ENST00000397906 NWD2Q9ULI1 1742 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 A0A0U1RQS6 177 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 CSTAP01040 98 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 MRPL49Q13405 166 aaKnown RBP10.94□□□□□ -0.66
TTC28-201ENST00000397906 SPANXN4Q5MJ08 99 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 CATSPEREQ5SY80 951 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 IQCKQ8N0W5 287 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 PQLC3Q8N755 202 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 DNAJC27Q9NZQ0 273 aa10.94□□□□□ -0.66
TTC28-201ENST00000397906 hCG_1807616A0A1W2PRN6 198 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 FARS2O95363 451 aaKnown RBP10.93□□□□□ -0.66
TTC28-201ENST00000397906 NR2C1P13056 603 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 ZNF782Q6ZMW2 699 aaPredicted RBP10.93□□□□□ -0.66
TTC28-201ENST00000397906 HMGB3O15347 200 aaKnown RBP10.93□□□□□ -0.66
TTC28-201ENST00000397906 HOXD13P35453 343 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 GALK2Q01415 458 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 FIGNL1Q6PIW4 674 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 CHST14Q8NCH0 376 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 NUP43Q8NFH3 380 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 HLA-CQ95604 372 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 IFT52Q9Y366 437 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms