RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 IGHV5-51A0A0C4DH38 117 aa18.52■□□□□ 0.56
PDLIM2-205ENST00000397761 ZSCAN9O15535 394 aaPredicted RBP18.52■□□□□ 0.56
PDLIM2-205ENST00000397761 HCRTR1O43613 425 aa18.52■□□□□ 0.56
PDLIM2-205ENST00000397761 TMPRSS11DO60235 418 aa18.52■□□□□ 0.56
PDLIM2-205ENST00000397761 SRPX2O60687 465 aaPredicted RBP18.52■□□□□ 0.56
PDLIM2-205ENST00000397761 TBX19O60806 448 aa18.52■□□□□ 0.56
PDLIM2-205ENST00000397761 SCN2BO60939 215 aa18.52■□□□□ 0.56
PDLIM2-205ENST00000397761 LRATO95237 230 aa18.52■□□□□ 0.56
PDLIM2-205ENST00000397761 ZBTB11O95625 1053 aaPredicted RBP18.52■□□□□ 0.56
PDLIM2-205ENST00000397761 RETP07949 1114 aa18.52■□□□□ 0.56
PDLIM2-205ENST00000397761 HIST1H1TP22492 207 aaPredicted RBP18.52■□□□□ 0.56
PDLIM2-205ENST00000397761 ATP5A1P25705 553 aaKnown RBP18.52■□□□□ 0.56
PDLIM2-205ENST00000397761 S100A3P33764 101 aa18.52■□□□□ 0.56
PDLIM2-205ENST00000397761 HPCAL1P37235 193 aa18.52■□□□□ 0.56
PDLIM2-205ENST00000397761 RPL3P39023 403 aaKnown RBP18.52■□□□□ 0.56
PDLIM2-205ENST00000397761 HNRNPFP52597 415 aaKnown RBP18.52■□□□□ 0.56
PDLIM2-205ENST00000397761 MAPK12P53778 367 aa18.52■□□□□ 0.56
PDLIM2-205ENST00000397761 TAS2R50P59544 299 aa18.52■□□□□ 0.56
PDLIM2-205ENST00000397761 FOXM1Q08050 763 aa18.52■□□□□ 0.56
PDLIM2-205ENST00000397761 HKDC1Q2TB90 917 aa18.52■□□□□ 0.56
PDLIM2-205ENST00000397761 TRMT5Q32P41 509 aaKnown RBP18.52■□□□□ 0.56
PDLIM2-205ENST00000397761 PERM1Q5SV97 790 aa18.52■□□□□ 0.56
PDLIM2-205ENST00000397761 MRM1Q6IN84 353 aaKnown RBP18.52■□□□□ 0.56
PDLIM2-205ENST00000397761 ARHGEF39Q8N4T4 335 aa18.52■□□□□ 0.56
PDLIM2-205ENST00000397761 ZNF655Q8N720 491 aaPredicted RBP18.52■□□□□ 0.56
PDLIM2-205ENST00000397761 TM4SF18Q96CE8 201 aa18.52■□□□□ 0.56
PDLIM2-205ENST00000397761 REEP4Q9H6H4 257 aa18.52■□□□□ 0.56
PDLIM2-205ENST00000397761 PRPF19Q9UMS4 504 aaKnown RBP18.52■□□□□ 0.56
PDLIM2-205ENST00000397761 MAN2B2Q9Y2E5 1009 aa18.52■□□□□ 0.56
PDLIM2-205ENST00000397761 PCDHGA7Q9Y5G6 932 aa18.52■□□□□ 0.56
PDLIM2-205ENST00000397761 A0A088AWK7 358 aa18.52■□□□□ 0.55
PDLIM2-205ENST00000397761 URADA6NGE7 173 aa18.52■□□□□ 0.55
PDLIM2-205ENST00000397761 GABRR3A8MPY1 467 aa18.52■□□□□ 0.55
PDLIM2-205ENST00000397761 AKAP10O43572 662 aa18.52■□□□□ 0.55
PDLIM2-205ENST00000397761 FURINP09958 794 aa18.52■□□□□ 0.55
PDLIM2-205ENST00000397761 ZNF806P0C7X5 589 aa18.52■□□□□ 0.55
PDLIM2-205ENST00000397761 PGM1P36871 562 aa18.52■□□□□ 0.55
PDLIM2-205ENST00000397761 SSR2P43308 183 aa18.52■□□□□ 0.55
PDLIM2-205ENST00000397761 KIR3DL1P43629 444 aa18.52■□□□□ 0.55
PDLIM2-205ENST00000397761 WNT3P56703 355 aa18.52■□□□□ 0.55
PDLIM2-205ENST00000397761 TMEM214Q6NUQ4 689 aaKnown RBP18.52■□□□□ 0.55
PDLIM2-205ENST00000397761 PGM2L1Q6PCE3 622 aa18.52■□□□□ 0.55
PDLIM2-205ENST00000397761 MCATQ8IVS2 390 aaKnown RBP18.52■□□□□ 0.55
PDLIM2-205ENST00000397761 COL27A1Q8IZC6 1860 aaPredicted RBP18.52■□□□□ 0.55
PDLIM2-205ENST00000397761 TMEM132CQ8N3T6 1108 aa18.52■□□□□ 0.55
PDLIM2-205ENST00000397761 AMER3Q8N944 861 aa18.52■□□□□ 0.55
PDLIM2-205ENST00000397761 Q8N9G6 341 aaPredicted RBP18.52■□□□□ 0.55
PDLIM2-205ENST00000397761 ACOT4Q8N9L9 421 aa18.52■□□□□ 0.55
PDLIM2-205ENST00000397761 OR7A2PQ8NGA2 310 aa18.52■□□□□ 0.55
PDLIM2-205ENST00000397761 GTF2H4Q92759 462 aa18.52■□□□□ 0.55
PDLIM2-205ENST00000397761 GFM2Q969S9 779 aaKnown RBP18.52■□□□□ 0.55
PDLIM2-205ENST00000397761 MCUR1Q96AQ8 359 aa18.52■□□□□ 0.55
PDLIM2-205ENST00000397761 OR52E6Q96RD3 313 aa18.52■□□□□ 0.55
PDLIM2-205ENST00000397761 SERHLQ9NQF3 203 aa18.52■□□□□ 0.55
PDLIM2-205ENST00000397761 PDP2Q9P2J9 529 aa18.52■□□□□ 0.55
PDLIM2-205ENST00000397761 BTBD3Q9Y2F9 522 aa18.52■□□□□ 0.55
PDLIM2-205ENST00000397761 ZFHX2Q9C0A1 2572 aaPredicted RBP18.51■□□□□ 0.55
PDLIM2-205ENST00000397761 ARHGAP10A1A4S6 786 aa18.51■□□□□ 0.55
PDLIM2-205ENST00000397761 TOX3O15405 576 aaPredicted RBP18.51■□□□□ 0.55
PDLIM2-205ENST00000397761 PIM1P11309 404 aaPredicted RBP18.51■□□□□ 0.55
PDLIM2-205ENST00000397761 COX7A2P14406 83 aa18.51■□□□□ 0.55
PDLIM2-205ENST00000397761 HOXD11P31277 338 aaPredicted RBP18.51■□□□□ 0.55
PDLIM2-205ENST00000397761 PSME3P61289 254 aa18.51■□□□□ 0.55
PDLIM2-205ENST00000397761 KLC1Q07866 573 aa18.51■□□□□ 0.55
PDLIM2-205ENST00000397761 SUZ12Q15022 739 aaKnown RBP18.51■□□□□ 0.55
PDLIM2-205ENST00000397761 PRTGQ2VWP7 1150 aa18.51■□□□□ 0.55
PDLIM2-205ENST00000397761 AMZ1Q400G9 498 aa18.51■□□□□ 0.55
PDLIM2-205ENST00000397761 SLC2A7Q6PXP3 512 aa18.51■□□□□ 0.55
PDLIM2-205ENST00000397761 DLEU7Q6UYE1 221 aa18.51■□□□□ 0.55
PDLIM2-205ENST00000397761 R3HCC1LQ7Z5L2 792 aaKnown RBP18.51■□□□□ 0.55
PDLIM2-205ENST00000397761 KMT5CQ86Y97 462 aa18.51■□□□□ 0.55
PDLIM2-205ENST00000397761 ARHGAP24Q8N264 748 aa18.51■□□□□ 0.55
PDLIM2-205ENST00000397761 CSNK1A1LQ8N752 337 aa18.51■□□□□ 0.55
PDLIM2-205ENST00000397761 ATOH1Q92858 354 aaPredicted RBP18.51■□□□□ 0.55
PDLIM2-205ENST00000397761 LRRC58Q96CX6 371 aa18.51■□□□□ 0.55
PDLIM2-205ENST00000397761 SLC41A2Q96JW4 573 aa18.51■□□□□ 0.55
PDLIM2-205ENST00000397761 HOPXQ9BPY8 73 aaPredicted RBP18.51■□□□□ 0.55
PDLIM2-205ENST00000397761 ROGDIQ9GZN7 287 aa18.51■□□□□ 0.55
PDLIM2-205ENST00000397761 FAM86C1Q9NVL1 165 aa18.51■□□□□ 0.55
PDLIM2-205ENST00000397761 GID8Q9NWU2 228 aa18.51■□□□□ 0.55
PDLIM2-205ENST00000397761 FAM120CQ9NX05 1096 aaKnown RBP18.51■□□□□ 0.55
PDLIM2-205ENST00000397761 CROTQ9UKG9 612 aa18.51■□□□□ 0.55
PDLIM2-205ENST00000397761 ASB4Q9Y574 426 aa18.51■□□□□ 0.55
PDLIM2-205ENST00000397761 SLC22A7Q9Y694 548 aa18.51■□□□□ 0.55
PDLIM2-205ENST00000397761 RIF1Q5UIP0 2472 aaKnown RBP18.51■□□□□ 0.55
PDLIM2-205ENST00000397761 SCN2AQ99250 2005 aa18.5■□□□□ 0.55
PDLIM2-205ENST00000397761 CPED1A4D0V7 1026 aa18.5■□□□□ 0.55
PDLIM2-205ENST00000397761 TXNDC9O14530 226 aa18.5■□□□□ 0.55
PDLIM2-205ENST00000397761 IL3P08700 152 aa18.5■□□□□ 0.55
PDLIM2-205ENST00000397761 MSL3P1P0C860 447 aa18.5■□□□□ 0.55
PDLIM2-205ENST00000397761 ZNF888P0CJ79 500 aaPredicted RBP18.5■□□□□ 0.55
PDLIM2-205ENST00000397761 LAMP1P11279 417 aa18.5■□□□□ 0.55
PDLIM2-205ENST00000397761 GRK6P43250 576 aa18.5■□□□□ 0.55
PDLIM2-205ENST00000397761 DUSP3P51452 185 aaPredicted RBP18.5■□□□□ 0.55
PDLIM2-205ENST00000397761 RAB8AP61006 207 aa18.5■□□□□ 0.55
PDLIM2-205ENST00000397761 SNRPNP63162 240 aaKnown RBP18.5■□□□□ 0.55
PDLIM2-205ENST00000397761 C2orf80Q0P641 193 aa18.5■□□□□ 0.55
PDLIM2-205ENST00000397761 MAPKAPK3Q16644 382 aa18.5■□□□□ 0.55
PDLIM2-205ENST00000397761 CLPPQ16740 277 aaPredicted RBP18.5■□□□□ 0.55
PDLIM2-205ENST00000397761 CPTPQ5TA50 214 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms