RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 NINQ8N4C6 2090 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 ZBTB2Q8N680 514 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 KLHL6Q8WZ60 621 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 CIDECQ96AQ7 238 aaPredicted RBP4.84□□□□□ -1.63
SSR1-202ENST00000397511 FAM120BQ96EK7 910 aaKnown RBP4.84□□□□□ -1.63
SSR1-202ENST00000397511 MED8Q96G25 268 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 TPD52L3Q96J77 140 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 FRMD6Q96NE9 622 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 TRAF4Q9BUZ4 470 aaPredicted RBP4.84□□□□□ -1.63
SSR1-202ENST00000397511 SPATA9Q9BWV2 254 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 HDHD5Q9BXW7 423 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 UGT2B28Q9BY64 529 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 CD244Q9BZW8 370 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 ZNF700Q9H0M5 742 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 ELOVL6Q9H5J4 265 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 FANCFQ9NPI8 374 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 ERVK13-1Q9NX77 482 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 ZIM2Q9NZV7 527 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 DNAJB9Q9UBS3 223 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 MAGEL2Q9UJ55 1249 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 RNF6Q9Y252 685 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 AUP1Q9Y679 476 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 SCN5AQ14524 2016 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 OR2A25A4D2G3 310 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 PRR23AA6NEV1 266 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 SAP18O00422 153 aaKnown RBP4.84□□□□□ -1.64
SSR1-202ENST00000397511 GAPDHSO14556 408 aaPredicted RBP4.84□□□□□ -1.64
SSR1-202ENST00000397511 PER2O15055 1255 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 ANKRD28O15084 1053 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 LILRB3O75022 631 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 FAM20BO75063 409 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 TNFRSF21O75509 655 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 STK16O75716 305 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 PDE9AO76083 593 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 RPLP0P05388 317 aaKnown RBP4.84□□□□□ -1.64
SSR1-202ENST00000397511 SLC10A3P09131 477 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 ZNF250P15622 560 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 SELPP16109 830 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 HOXB8P17481 243 aaPredicted RBP4.84□□□□□ -1.64
SSR1-202ENST00000397511 GGT1P19440 569 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 TNFRSF1BP20333 461 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 ITGALP20701 1170 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 HLA-DMAP28067 261 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 GABRR2P28476 465 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 HTR1EP28566 365 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 PBLDP30039 288 aaPredicted RBP4.84□□□□□ -1.64
SSR1-202ENST00000397511 CD6P30203 668 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 CCR7P32248 378 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 RFX2P48378 723 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 GPR85P60893 370 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 CXCR4P61073 352 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 SP3Q02447 781 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 RGS1Q08116 209 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 COX10Q12887 443 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 ANGPT1Q15389 498 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 DGKKQ5KSL6 1271 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 CACHD1Q5VU97 1274 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 Q6ZPB1 254 aaPredicted RBP4.84□□□□□ -1.64
SSR1-202ENST00000397511 OR8H3Q8N146 312 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 LILRA3Q8N6C8 439 aaPredicted RBP4.84□□□□□ -1.64
SSR1-202ENST00000397511 GPR156Q8NFN8 814 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 OR8K5Q8NH50 307 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 PIH1D2Q8WWB5 315 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 SORCS1Q8WY21 1168 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 MAL2Q969L2 176 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 ISG20Q96AZ6 181 aaKnown RBP4.84□□□□□ -1.64
SSR1-202ENST00000397511 RHBDF1Q96CC6 855 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 APIPQ96GX9 242 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 GTPBP2Q9BX10 602 aaKnown RBP4.84□□□□□ -1.64
SSR1-202ENST00000397511 NUSAP1Q9BXS6 441 aaKnown RBP4.84□□□□□ -1.64
SSR1-202ENST00000397511 ACPTQ9BZG2 426 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 TMEM168Q9H0V1 697 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 MMP28Q9H239 520 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 P2RY12Q9H244 342 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 ZNF334Q9HCZ1 680 aaPredicted RBP4.84□□□□□ -1.64
SSR1-202ENST00000397511 DYRK4Q9NR20 520 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 NUDT4Q9NZJ9 180 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 VPS9D1Q9Y2B5 631 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 MAN2B2Q9Y2E5 1009 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 NEUROG3Q9Y4Z2 214 aa4.84□□□□□ -1.64
SSR1-202ENST00000397511 GBF1Q92538 1859 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 CHD9Q3L8U1 2897 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 CCDC88CQ9P219 2028 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 A0A1W2PRU2 124 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 TMEM189-UBE2V1I3L0A0 370 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 DSCR3O14972 297 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 SLC16A6O15403 523 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 KLK8O60259 260 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 CREG1O75629 220 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 HMGN1P05114 100 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 ALPPP05187 535 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 KELP23276 732 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 F8A1P23610 371 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 DGKAP23743 735 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 PPP3CCP48454 512 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 SCN1BQ07699 218 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 SREBF2Q12772 1141 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 ABRQ12979 859 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 MRPL28Q13084 256 aaKnown RBP4.83□□□□□ -1.64
SSR1-202ENST00000397511 RAPSNQ13702 412 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms