RNA–Protein interactions for RNA: ENST00000395740.5

FGD4-201, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 1 (best)

Gene FGD4, Length 2,691 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-201ENST00000395740 PRICKLE2Q7Z3G6 844 aa4.88□□□□□ -1.63
FGD4-201ENST00000395740 TSEN54Q7Z6J9 526 aaKnown RBP4.88□□□□□ -1.63
FGD4-201ENST00000395740 UBE2Q1Q7Z7E8 422 aa4.88□□□□□ -1.63
FGD4-201ENST00000395740 FAM109AQ8N4B1 249 aa4.88□□□□□ -1.63
FGD4-201ENST00000395740 NANOGP1Q8N7R0 232 aa4.88□□□□□ -1.63
FGD4-201ENST00000395740 PNPLA1Q8N8W4 532 aa4.88□□□□□ -1.63
FGD4-201ENST00000395740 LPCAT1Q8NF37 534 aa4.88□□□□□ -1.63
FGD4-201ENST00000395740 B3GNT7Q8NFL0 401 aa4.88□□□□□ -1.63
FGD4-201ENST00000395740 OR52N2Q8NGI0 321 aa4.88□□□□□ -1.63
FGD4-201ENST00000395740 DNAJA4Q8WW22 397 aaPredicted RBP4.88□□□□□ -1.63
FGD4-201ENST00000395740 FBXO32Q969P5 355 aa4.88□□□□□ -1.63
FGD4-201ENST00000395740 HYLS1Q96M11 299 aa4.88□□□□□ -1.63
FGD4-201ENST00000395740 OPALINQ96PE5 141 aa4.88□□□□□ -1.63
FGD4-201ENST00000395740 FRG2BQ96QU4 278 aa4.88□□□□□ -1.63
FGD4-201ENST00000395740 CHCHD6Q9BRQ6 235 aa4.88□□□□□ -1.63
FGD4-201ENST00000395740 CCM2Q9BSQ5 444 aa4.88□□□□□ -1.63
FGD4-201ENST00000395740 C2orf49Q9BVC5 232 aaPredicted RBP4.88□□□□□ -1.63
FGD4-201ENST00000395740 MKRN2Q9H000 416 aaKnown RBP4.88□□□□□ -1.63
FGD4-201ENST00000395740 AP5M1Q9H0R1 490 aa4.88□□□□□ -1.63
FGD4-201ENST00000395740 FAM83DQ9H4H8 585 aa4.88□□□□□ -1.63
FGD4-201ENST00000395740 HHATLQ9HCP6 504 aa4.88□□□□□ -1.63
FGD4-201ENST00000395740 RASSF1Q9NS23 344 aa4.88□□□□□ -1.63
FGD4-201ENST00000395740 ZNF275Q9NSD4 429 aaPredicted RBP4.88□□□□□ -1.63
FGD4-201ENST00000395740 GPRC5BQ9NZH0 403 aa4.88□□□□□ -1.63
FGD4-201ENST00000395740 FLRT1Q9NZU1 646 aa4.88□□□□□ -1.63
FGD4-201ENST00000395740 NUP50Q9UKX7 468 aa4.88□□□□□ -1.63
FGD4-201ENST00000395740 MGAT4BQ9UQ53 548 aa4.88□□□□□ -1.63
FGD4-201ENST00000395740 PPIL1Q9Y3C6 166 aa4.88□□□□□ -1.63
FGD4-201ENST00000395740 CFAP20Q9Y6A4 193 aaKnown RBP4.88□□□□□ -1.63
FGD4-201ENST00000395740 PKD1L2Q7Z442 2459 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 A0A1W2PQ67 120 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 SLC12A8A0AV02 714 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 GFYI3L273 518 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 hCG_2039718K7EN88 272 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 SGK494L7N484 410 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 GAPDHSO14556 408 aaPredicted RBP4.87□□□□□ -1.63
FGD4-201ENST00000395740 CTDSP2O14595 271 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 SCAMP2O15127 329 aaKnown RBP4.87□□□□□ -1.63
FGD4-201ENST00000395740 ZNF780AO75290 641 aaPredicted RBP4.87□□□□□ -1.63
FGD4-201ENST00000395740 TNFRSF21O75509 655 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 SLC25A14O95258 325 aaPredicted RBP4.87□□□□□ -1.63
FGD4-201ENST00000395740 FOSL1P15407 271 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 CPEP16870 476 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 MZF1P28698 734 aaPredicted RBP4.87□□□□□ -1.63
FGD4-201ENST00000395740 CTGFP29279 349 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 IFNA8P32881 189 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 ARL1P40616 181 aaPredicted RBP4.87□□□□□ -1.63
FGD4-201ENST00000395740 ZNF157P51786 506 aaPredicted RBP4.87□□□□□ -1.63
FGD4-201ENST00000395740 KCNQ1P51787 676 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 CLDN20P56880 219 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 SMIM11AP58511 58 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 SRP54P61011 504 aaKnown RBP4.87□□□□□ -1.63
FGD4-201ENST00000395740 CAP1Q01518 475 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 IL1RL1Q01638 556 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 COX10Q12887 443 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 PPP1R8Q12972 351 aaKnown RBP4.87□□□□□ -1.63
FGD4-201ENST00000395740 NFATC2Q13469 925 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 C1DQ13901 141 aaKnown RBP4.87□□□□□ -1.63
FGD4-201ENST00000395740 QPRTQ15274 297 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 SPIN4Q56A73 249 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 ESCO2Q56NI9 601 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 MORN1Q5T089 497 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 LCN1P1Q5VSP4 162 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 C12orf73Q69YU5 71 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 IL31Q6EBC2 164 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 FRMPD2BQ6IN97 320 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 ASPGQ86U10 573 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 CCDC28AQ8IWP9 274 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 LRRC56Q8IYG6 542 aaPredicted RBP4.87□□□□□ -1.63
FGD4-201ENST00000395740 OR8H2Q8N162 312 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 SLC5A8Q8N695 610 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 TRPV1Q8NER1 839 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 WDR20Q8TBZ3 569 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 CREB3L4Q8TEY5 395 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 PPP1R16AQ96I34 528 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 PIP5K1AQ99755 562 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 RHNO1Q9BSD3 238 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 MARVELD1Q9BSK0 173 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 DUSP26Q9BV47 211 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 ATP13A2Q9NQ11 1180 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 DNAJC11Q9NVH1 559 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 RBFOX1Q9NWB1 397 aaKnown RBP4.87□□□□□ -1.63
FGD4-201ENST00000395740 MS4A12Q9NXJ0 267 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 ING3Q9NXR8 418 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 ZDHHC3Q9NYG2 299 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 LHX3Q9UBR4 397 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 DNMT3LQ9UJW3 386 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 FZD4Q9ULV1 537 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 ENPP4Q9Y6X5 453 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 TTC3P53804 2025 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 COL4A6Q14031 1691 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.87□□□□□ -1.63
FGD4-201ENST00000395740 LOC100506127A0A0U1RQW1 187 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 KRT87PA6NCN2 255 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 TMEM88BA6NKF7 163 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 ICMTO60725 284 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 TBX19O60806 448 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 VIPP01282 170 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 ITGB1P05556 798 aa4.87□□□□□ -1.63
FGD4-201ENST00000395740 RHOCP08134 193 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms