RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 QRFPRQ96P65 431 aa18.82■□□□□ 0.6
SNCA-203ENST00000394986 ZNF382Q96SR6 550 aa18.82■□□□□ 0.6
SNCA-203ENST00000394986 SORBS1Q9BX66 1292 aaKnown RBP18.82■□□□□ 0.6
SNCA-203ENST00000394986 FARSBQ9NSD9 589 aaKnown RBP18.82■□□□□ 0.6
SNCA-203ENST00000394986 TRPS1Q9UHF7 1281 aa18.82■□□□□ 0.6
SNCA-203ENST00000394986 UBFD1O14562 309 aaKnown RBP18.81■□□□□ 0.6
SNCA-203ENST00000394986 ITGB2P05107 769 aa18.81■□□□□ 0.6
SNCA-203ENST00000394986 H2AFXP16104 143 aaPredicted RBP18.81■□□□□ 0.6
SNCA-203ENST00000394986 ALDH3A1P30838 453 aa18.81■□□□□ 0.6
SNCA-203ENST00000394986 RUNX2Q13950 521 aa18.81■□□□□ 0.6
SNCA-203ENST00000394986 MINDY4Q4G0A6 757 aa18.81■□□□□ 0.6
SNCA-203ENST00000394986 MFSD4BQ5TF39 518 aa18.81■□□□□ 0.6
SNCA-203ENST00000394986 FRG2Q64ET8 278 aa18.81■□□□□ 0.6
SNCA-203ENST00000394986 ZNF793Q6ZN11 406 aa18.81■□□□□ 0.6
SNCA-203ENST00000394986 FRMD7Q6ZUT3 714 aa18.81■□□□□ 0.6
SNCA-203ENST00000394986 CROCCP2Q86T23 111 aa18.81■□□□□ 0.6
SNCA-203ENST00000394986 CA13Q8N1Q1 262 aa18.81■□□□□ 0.6
SNCA-203ENST00000394986 THAP4Q8WY91 577 aa18.81■□□□□ 0.6
SNCA-203ENST00000394986 FRG2BQ96QU4 278 aa18.81■□□□□ 0.6
SNCA-203ENST00000394986 SHCBP1LQ9BZQ2 653 aa18.81■□□□□ 0.6
SNCA-203ENST00000394986 ADGRE2Q9UHX3 823 aa18.81■□□□□ 0.6
SNCA-203ENST00000394986 MKL2Q9ULH7 1088 aa18.81■□□□□ 0.6
SNCA-203ENST00000394986 TSC22D4Q9Y3Q8 395 aa18.81■□□□□ 0.6
SNCA-203ENST00000394986 HS3ST3B1Q9Y662 390 aa18.81■□□□□ 0.6
SNCA-203ENST00000394986 KCNMB2Q9Y691 235 aa18.81■□□□□ 0.6
SNCA-203ENST00000394986 SOCS6O14544 535 aa18.8■□□□□ 0.6
SNCA-203ENST00000394986 ALOX12BO75342 701 aa18.8■□□□□ 0.6
SNCA-203ENST00000394986 DNAJB5O75953 348 aa18.8■□□□□ 0.6
SNCA-203ENST00000394986 MLYCDO95822 493 aa18.8■□□□□ 0.6
SNCA-203ENST00000394986 HEXBP07686 556 aa18.8■□□□□ 0.6
SNCA-203ENST00000394986 MYZAPP0CAP1 466 aa18.8■□□□□ 0.6
SNCA-203ENST00000394986 MMP11P24347 488 aa18.8■□□□□ 0.6
SNCA-203ENST00000394986 HPDP32754 393 aaPredicted RBP18.8■□□□□ 0.6
SNCA-203ENST00000394986 EMP2P54851 167 aa18.8■□□□□ 0.6
SNCA-203ENST00000394986 SKP1P63208 163 aa18.8■□□□□ 0.6
SNCA-203ENST00000394986 PHEXP78562 749 aa18.8■□□□□ 0.6
SNCA-203ENST00000394986 IFT88Q13099 833 aa18.8■□□□□ 0.6
SNCA-203ENST00000394986 CFAP157Q5JU67 520 aa18.8■□□□□ 0.6
SNCA-203ENST00000394986 DEPDC1Q5TB30 811 aa18.8■□□□□ 0.6
SNCA-203ENST00000394986 CHSY3Q70JA7 882 aa18.8■□□□□ 0.6
SNCA-203ENST00000394986 AGAP11Q8TF27 550 aa18.8■□□□□ 0.6
SNCA-203ENST00000394986 C8orf44Q96CB5 159 aa18.8■□□□□ 0.6
SNCA-203ENST00000394986 KCNA7Q96RP8 456 aa18.8■□□□□ 0.6
SNCA-203ENST00000394986 HBEGFQ99075 208 aa18.8■□□□□ 0.6
SNCA-203ENST00000394986 GATA5Q9BWX5 397 aaPredicted RBP18.8■□□□□ 0.6
SNCA-203ENST00000394986 TRIM55Q9BYV6 548 aa18.8■□□□□ 0.6
SNCA-203ENST00000394986 VN1R1Q9GZP7 353 aa18.8■□□□□ 0.6
SNCA-203ENST00000394986 ELOVL6Q9H5J4 265 aa18.8■□□□□ 0.6
SNCA-203ENST00000394986 COPS7BQ9H9Q2 264 aaPredicted RBP18.8■□□□□ 0.6
SNCA-203ENST00000394986 MID1IP1Q9NPA3 183 aa18.8■□□□□ 0.6
SNCA-203ENST00000394986 PRDM7Q9NQW5 492 aa18.8■□□□□ 0.6
SNCA-203ENST00000394986 SCN3AQ9NY46 2000 aa18.79■□□□□ 0.6
SNCA-203ENST00000394986 FAM227AF5H4B4 570 aa18.79■□□□□ 0.6
SNCA-203ENST00000394986 PLPP1O14494 284 aa18.79■□□□□ 0.6
SNCA-203ENST00000394986 B3GALT2O43825 422 aa18.79■□□□□ 0.6
SNCA-203ENST00000394986 FAM87AP0C7U9 286 aa18.79■□□□□ 0.6
SNCA-203ENST00000394986 ETV4P43268 484 aa18.79■□□□□ 0.6
SNCA-203ENST00000394986 HTR6P50406 440 aa18.79■□□□□ 0.6
SNCA-203ENST00000394986 RAP1GDS1P52306 607 aa18.79■□□□□ 0.6
SNCA-203ENST00000394986 TMEM35AQ53FP2 167 aa18.79■□□□□ 0.6
SNCA-203ENST00000394986 NIPAL1Q6NVV3 410 aa18.79■□□□□ 0.6
SNCA-203ENST00000394986 PKNOX2Q96KN3 472 aa18.79■□□□□ 0.6
SNCA-203ENST00000394986 KCNC2Q96PR1 638 aa18.79■□□□□ 0.6
SNCA-203ENST00000394986 TNFRSF12AQ9NP84 129 aa18.79■□□□□ 0.6
SNCA-203ENST00000394986 LANCL2Q9NS86 450 aa18.79■□□□□ 0.6
SNCA-203ENST00000394986 SEMA3GQ9NS98 782 aa18.79■□□□□ 0.6
SNCA-203ENST00000394986 ARGLU1Q9NWB6 273 aaPredicted RBP18.79■□□□□ 0.6
SNCA-203ENST00000394986 P4HTMQ9NXG6 502 aa18.79■□□□□ 0.6
SNCA-203ENST00000394986 TIMM22Q9Y584 194 aa18.79■□□□□ 0.6
SNCA-203ENST00000394986 CACNA1GO43497 2377 aa18.78■□□□□ 0.6
SNCA-203ENST00000394986 ERVH48-1M5A8F1 160 aa18.78■□□□□ 0.6
SNCA-203ENST00000394986 AGPSO00116 658 aa18.78■□□□□ 0.6
SNCA-203ENST00000394986 FOXE1O00358 373 aaPredicted RBP18.78■□□□□ 0.6
SNCA-203ENST00000394986 TRIM13O60858 407 aa18.78■□□□□ 0.6
SNCA-203ENST00000394986 B4GALT2O60909 372 aa18.78■□□□□ 0.6
SNCA-203ENST00000394986 PDYNP01213 254 aa18.78■□□□□ 0.6
SNCA-203ENST00000394986 FHP07954 510 aa18.78■□□□□ 0.6
SNCA-203ENST00000394986 ATP5A1P25705 553 aaKnown RBP18.78■□□□□ 0.6
SNCA-203ENST00000394986 SSR2P43308 183 aa18.78■□□□□ 0.6
SNCA-203ENST00000394986 MTTPP55157 894 aa18.78■□□□□ 0.6
SNCA-203ENST00000394986 FOXA1P55317 472 aa18.78■□□□□ 0.6
SNCA-203ENST00000394986 PKNOX1P55347 436 aa18.78■□□□□ 0.6
SNCA-203ENST00000394986 TGM3Q08188 693 aa18.78■□□□□ 0.6
SNCA-203ENST00000394986 MPP2Q14168 576 aa18.78■□□□□ 0.6
SNCA-203ENST00000394986 KIRREL2Q6UWL6 708 aa18.78■□□□□ 0.6
SNCA-203ENST00000394986 ZCCHC23Q6ZST2 131 aa18.78■□□□□ 0.6
SNCA-203ENST00000394986 APOBEC4Q8WW27 367 aaKnown RBP18.78■□□□□ 0.6
SNCA-203ENST00000394986 TBC1D20Q96BZ9 403 aa18.78■□□□□ 0.6
SNCA-203ENST00000394986 SERINC2Q96SA4 455 aa18.78■□□□□ 0.6
SNCA-203ENST00000394986 ARHGAP9Q9BRR9 750 aa18.78■□□□□ 0.6
SNCA-203ENST00000394986 TMBIM4Q9HC24 238 aa18.78■□□□□ 0.6
SNCA-203ENST00000394986 SSU72Q9NP77 194 aaKnown RBP18.78■□□□□ 0.6
SNCA-203ENST00000394986 KCNK9Q9NPC2 374 aa18.78■□□□□ 0.6
SNCA-203ENST00000394986 FBXL4Q9UKA2 621 aa18.78■□□□□ 0.6
SNCA-203ENST00000394986 CHD6Q8TD26 2715 aa18.78■□□□□ 0.6
SNCA-203ENST00000394986 IGSF10Q6WRI0 2623 aa18.77■□□□□ 0.6
SNCA-203ENST00000394986 A0A088AWK7 358 aa18.77■□□□□ 0.6
SNCA-203ENST00000394986 MANBAO00462 879 aa18.77■□□□□ 0.6
SNCA-203ENST00000394986 ESRRBO95718 433 aa18.77■□□□□ 0.6
SNCA-203ENST00000394986 RNH1P13489 461 aaKnown RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms