RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 SPARTQ8N0X7 666 aa17.79■□□□□ 0.44
SIL1-202ENST00000394817 SGCDQ92629 289 aa17.79■□□□□ 0.44
SIL1-202ENST00000394817 MAGED4Q96JG8 741 aa17.79■□□□□ 0.44
SIL1-202ENST00000394817 AIF1LQ9BQI0 150 aa17.79■□□□□ 0.44
SIL1-202ENST00000394817 MS4A8Q9BY19 250 aa17.79■□□□□ 0.44
SIL1-202ENST00000394817 ZNF717Q9BY31 904 aaPredicted RBP17.79■□□□□ 0.44
SIL1-202ENST00000394817 WDR26Q9H7D7 661 aa17.79■□□□□ 0.44
SIL1-202ENST00000394817 MBNL1Q9NR56 388 aaKnown RBP17.79■□□□□ 0.44
SIL1-202ENST00000394817 THUMPD1Q9NXG2 353 aaKnown RBP17.79■□□□□ 0.44
SIL1-202ENST00000394817 AHSPQ9NZD4 102 aa17.79■□□□□ 0.44
SIL1-202ENST00000394817 SERGEFQ9UGK8 458 aa17.79■□□□□ 0.44
SIL1-202ENST00000394817 CFAP20Q9Y6A4 193 aaKnown RBP17.79■□□□□ 0.44
SIL1-202ENST00000394817 EYSQ5T1H1 3165 aa17.79■□□□□ 0.44
SIL1-202ENST00000394817 BRWD1Q9NSI6 2320 aa17.79■□□□□ 0.44
SIL1-202ENST00000394817 ANKDD1BA6NHY2 528 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 C9P02748 559 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 CXCR2P25025 360 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 SERPINB1P30740 379 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 TRIM23P36406 574 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 WASP42768 502 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 SOX9P48436 509 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 SELENOWP63302 87 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 REEP5Q00765 189 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 DMPKQ09013 629 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 IRF4Q15306 451 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 PRSS53Q2L4Q9 553 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 KHDRBS2Q5VWX1 349 aaKnown RBP17.78■□□□□ 0.44
SIL1-202ENST00000394817 NUDT18Q6ZVK8 323 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 SMPDL3AQ92484 453 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 ELSPBP1Q96BH3 223 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 SORBS1Q9BX66 1292 aaKnown RBP17.78■□□□□ 0.44
SIL1-202ENST00000394817 RAD21L1Q9H4I0 556 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 RIBC2Q9H4K1 309 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 MIEF1Q9NQG6 463 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 C1GALT1Q9NS00 363 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 CUEDC1Q9NWM3 386 aaPredicted RBP17.78■□□□□ 0.44
SIL1-202ENST00000394817 CLDND1Q9NY35 253 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 TAAR2Q9P1P5 351 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 ACSL5Q9ULC5 683 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 ICKQ9UPZ9 632 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 TICRRQ7Z2Z1 1910 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 A0A1W2PPV9 198 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 A0A1W2PRB8 838 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 ATE1O95260 518 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 CALRP27797 417 aaKnown RBP17.78■□□□□ 0.44
SIL1-202ENST00000394817 CLK3P49761 638 aaKnown RBP17.78■□□□□ 0.44
SIL1-202ENST00000394817 EEF1A2Q05639 463 aaKnown RBP17.78■□□□□ 0.44
SIL1-202ENST00000394817 CDK5R2Q13319 367 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 SCARB2Q14108 478 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 C2orf27AQ580R0 203 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 DEPDC1Q5TB30 811 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 GTF2IRD2BQ6EKJ0 949 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 TRIM40Q6P9F5 258 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 CCDC80Q76M96 950 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 GTF2IRD2Q86UP8 949 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 HDDC3Q8N4P3 179 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 ANKRD53Q8N9V6 530 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 DTNBP1Q96EV8 351 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 NRTNQ99748 197 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 PITHD1Q9GZP4 211 aaPredicted RBP17.78■□□□□ 0.44
SIL1-202ENST00000394817 KIF17Q9P2E2 1029 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 ACSL6Q9UKU0 697 aa17.78■□□□□ 0.44
SIL1-202ENST00000394817 WBP11Q9Y2W2 641 aaKnown RBP17.78■□□□□ 0.44
SIL1-202ENST00000394817 M0QX08 132 aa17.77■□□□□ 0.44
SIL1-202ENST00000394817 CCR8P51685 355 aa17.77■□□□□ 0.44
SIL1-202ENST00000394817 CLCNKAP51800 687 aa17.77■□□□□ 0.44
SIL1-202ENST00000394817 IL5RAQ01344 420 aa17.77■□□□□ 0.44
SIL1-202ENST00000394817 SLC5A12Q1EHB4 618 aa17.77■□□□□ 0.44
SIL1-202ENST00000394817 TP53I13Q8NBR0 393 aaPredicted RBP17.77■□□□□ 0.44
SIL1-202ENST00000394817 SLC6A16Q9GZN6 736 aa17.77■□□□□ 0.44
SIL1-202ENST00000394817 ZNF576Q9H609 170 aa17.77■□□□□ 0.44
SIL1-202ENST00000394817 NT5DC2Q9H857 520 aa17.77■□□□□ 0.44
SIL1-202ENST00000394817 KRT84Q9NSB2 600 aa17.77■□□□□ 0.44
SIL1-202ENST00000394817 EXD2Q9NVH0 621 aa17.77■□□□□ 0.44
SIL1-202ENST00000394817 ZFR2Q9UPR6 939 aaKnown RBP17.77■□□□□ 0.44
SIL1-202ENST00000394817 OR1A2Q9Y585 309 aa17.77■□□□□ 0.44
SIL1-202ENST00000394817 A0A1W2PP55 124 aa17.76■□□□□ 0.43
SIL1-202ENST00000394817 TBX19O60806 448 aa17.76■□□□□ 0.43
SIL1-202ENST00000394817 KRT75O95678 551 aa17.76■□□□□ 0.43
SIL1-202ENST00000394817 PSMB5P28074 263 aa17.76■□□□□ 0.43
SIL1-202ENST00000394817 CHI3L1P36222 383 aaPredicted RBP17.76■□□□□ 0.43
SIL1-202ENST00000394817 TMBIM6P55061 237 aa17.76■□□□□ 0.43
SIL1-202ENST00000394817 FGL2Q14314 439 aa17.76■□□□□ 0.43
SIL1-202ENST00000394817 ZNF630Q2M218 657 aaPredicted RBP17.76■□□□□ 0.43
SIL1-202ENST00000394817 DUS1LQ6P1R4 473 aaKnown RBP17.76■□□□□ 0.43
SIL1-202ENST00000394817 TSEN54Q7Z6J9 526 aaKnown RBP17.76■□□□□ 0.43
SIL1-202ENST00000394817 RNF130Q86XS8 419 aa17.76■□□□□ 0.43
SIL1-202ENST00000394817 MMP21Q8N119 569 aa17.76■□□□□ 0.43
SIL1-202ENST00000394817 ZNF513Q8N8E2 541 aaPredicted RBP17.76■□□□□ 0.43
SIL1-202ENST00000394817 CNIH3Q8TBE1 160 aa17.76■□□□□ 0.43
SIL1-202ENST00000394817 NAA50Q9GZZ1 169 aaKnown RBP17.76■□□□□ 0.43
SIL1-202ENST00000394817 LHPPQ9H008 270 aa17.76■□□□□ 0.43
SIL1-202ENST00000394817 PAK1IP1Q9NWT1 392 aaPredicted RBP17.76■□□□□ 0.43
SIL1-202ENST00000394817 NDRG4Q9ULP0 352 aaKnown RBP17.76■□□□□ 0.43
SIL1-202ENST00000394817 PCDHGB3Q9Y5G1 929 aa17.76■□□□□ 0.43
SIL1-202ENST00000394817 ATG2BQ96BY7 2078 aa17.76■□□□□ 0.43
SIL1-202ENST00000394817 E9PQ18 207 aa17.76■□□□□ 0.43
SIL1-202ENST00000394817 NOL3O60936 208 aaKnown RBP17.76■□□□□ 0.43
SIL1-202ENST00000394817 ANGPTL1O95841 491 aa17.76■□□□□ 0.43
SIL1-202ENST00000394817 CYP4B1P13584 511 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms